BLASTX nr result
ID: Rheum21_contig00015398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00015398
(859 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus comm... 139 1e-30
ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606... 127 5e-27
ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608... 125 2e-26
ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citr... 125 2e-26
gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus pe... 125 2e-26
gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao] 125 3e-26
ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-li... 124 4e-26
ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutr... 122 1e-25
ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis th... 122 2e-25
ref|XP_002325451.1| DNA polymerase delta subunit 4 family protei... 120 5e-25
gb|AAM65969.1| unknown [Arabidopsis thaliana] 120 5e-25
ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabi... 120 6e-25
ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209... 119 1e-24
gb|EOY10253.1| Polymerase delta 4, putative [Theobroma cacao] 117 4e-24
ref|XP_002319772.1| DNA polymerase delta subunit 4 family protei... 117 4e-24
gb|ABK93288.1| unknown [Populus trichocarpa] 117 7e-24
gb|ESW31010.1| hypothetical protein PHAVU_002G201200g [Phaseolus... 116 9e-24
ref|XP_003524773.1| PREDICTED: DNA polymerase delta subunit 4-li... 115 2e-23
ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263... 115 2e-23
emb|CBI26425.3| unnamed protein product [Vitis vinifera] 115 2e-23
>ref|XP_002524033.1| delta DNA polymerase, putative [Ricinus communis]
gi|223536760|gb|EEF38401.1| delta DNA polymerase,
putative [Ricinus communis]
Length = 126
Score = 139 bits (350), Expect = 1e-30
Identities = 60/89 (67%), Positives = 71/89 (79%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+A GS++ QP A +SHGG+LDLQD+YD E +LRQFDMNM YGPCLGMTR RWERA
Sbjct: 38 HAAAIGSNITQPTALISHGGALDLQDDYDKNEEVLRQFDMNMAYGPCLGMTRVGRWERAQ 97
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLGLNPP+ ++ LL VN+ECLWDGRV
Sbjct: 98 RLGLNPPKQIEDLLKGGKVNSECLWDGRV 126
>ref|XP_006360330.1| PREDICTED: uncharacterized protein LOC102606360 [Solanum tuberosum]
Length = 120
Score = 127 bits (319), Expect = 5e-27
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
++A GS+V QPPA +SHG SLDL+D YD E +LRQFDMNM YGPCLGM R RWERA
Sbjct: 33 NAAAIGSNVTQPPALISHG-SLDLKDSYDQNEEVLRQFDMNMVYGPCLGMNRLDRWERAK 91
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
+LG+NPP DV+ LL S+ V ECLWDGRV
Sbjct: 92 KLGMNPPTDVERLLRSNKVRNECLWDGRV 120
>ref|XP_006484706.1| PREDICTED: uncharacterized protein LOC102608934 [Citrus sinensis]
Length = 122
Score = 125 bits (315), Expect = 2e-26
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = -3
Query: 581 SATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERADR 402
SATFGSDV QP A +SHG SLDL+ +YD E +LRQFDMNM YGPC+GM+R RWERA R
Sbjct: 36 SATFGSDVTQPTALISHG-SLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYR 94
Query: 401 LGLNPPEDVQSLLTSSDVNAECLWDGRV 318
LGLNPP++++ LL + V AECLW+ RV
Sbjct: 95 LGLNPPKEIEVLLKTRKVQAECLWEDRV 122
>ref|XP_006437397.1| hypothetical protein CICLE_v10033086mg [Citrus clementina]
gi|557539593|gb|ESR50637.1| hypothetical protein
CICLE_v10033086mg [Citrus clementina]
Length = 122
Score = 125 bits (315), Expect = 2e-26
Identities = 58/88 (65%), Positives = 70/88 (79%)
Frame = -3
Query: 581 SATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERADR 402
SATFGSDV QP A +SHG SLDL+ +YD E +LRQFDMNM YGPC+GM+R RWERA R
Sbjct: 36 SATFGSDVTQPTALISHG-SLDLKGDYDDNEEVLRQFDMNMAYGPCIGMSRLARWERAYR 94
Query: 401 LGLNPPEDVQSLLTSSDVNAECLWDGRV 318
LGLNPP++++ LL + V AECLW+ RV
Sbjct: 95 LGLNPPKEIEVLLKTRKVQAECLWEDRV 122
>gb|EMJ19797.1| hypothetical protein PRUPE_ppa013345mg [Prunus persica]
Length = 128
Score = 125 bits (315), Expect = 2e-26
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = -3
Query: 581 SATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERADR 402
+A+FGSDV QP A +SH SLDL+D+YD +E +LRQFDMNM YGPC+GMTR RWERA
Sbjct: 42 AASFGSDVTQPTALMSHA-SLDLKDDYDEQEALLRQFDMNMAYGPCVGMTRLERWERACI 100
Query: 401 LGLNPPEDVQSLLTSSDVNAECLWDGRV 318
LGLNPP++V+SLLT V ECLWDGR+
Sbjct: 101 LGLNPPKEVESLLTGGKVCCECLWDGRI 128
>gb|EOY10256.1| Polymerase delta 4 [Theobroma cacao]
Length = 178
Score = 125 bits (313), Expect = 3e-26
Identities = 56/89 (62%), Positives = 71/89 (79%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+ATFGS++ QP A S GGSLDL+D++D +E +LRQFDMNM YGPCLG+TR RWERA
Sbjct: 90 HAATFGSNITQPFALTSPGGSLDLKDDFDEQEEVLRQFDMNMAYGPCLGITRMARWERAQ 149
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLGLNPP+++++LL V E L+DGRV
Sbjct: 150 RLGLNPPKEIENLLKGGKVKLESLFDGRV 178
>ref|XP_004247827.1| PREDICTED: DNA polymerase delta subunit 4-like [Solanum
lycopersicum]
Length = 120
Score = 124 bits (311), Expect = 4e-26
Identities = 58/89 (65%), Positives = 68/89 (76%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
++A GS+V QP A +SHG SLDL+D YD E +LRQFDMNM YGPCLGM R RWERA
Sbjct: 33 NAAAIGSNVTQPSALISHG-SLDLKDNYDQNEEVLRQFDMNMVYGPCLGMNRLDRWERAK 91
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
+LG+NPP DV+ LL S+ V ECLWDGRV
Sbjct: 92 KLGMNPPADVERLLRSNKVRNECLWDGRV 120
>ref|XP_006417530.1| hypothetical protein EUTSA_v10009118mg [Eutrema salsugineum]
gi|557095301|gb|ESQ35883.1| hypothetical protein
EUTSA_v10009118mg [Eutrema salsugineum]
Length = 124
Score = 122 bits (307), Expect = 1e-25
Identities = 57/89 (64%), Positives = 67/89 (75%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+AT GSD QP A +SHG SLDL D YD +E +LRQFDMNM YGPCLGMTR RWERA
Sbjct: 37 HAATQGSDATQPAALISHG-SLDLNDAYDKEEEMLRQFDMNMAYGPCLGMTRLDRWERAL 95
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLG+NPP +++ LL + V +CLW GRV
Sbjct: 96 RLGMNPPSEIERLLKTEKVQQDCLWQGRV 124
>ref|NP_563854.1| DNA polymerase delta subunit 4 [Arabidopsis thaliana]
gi|98961061|gb|ABF59014.1| At1g09815 [Arabidopsis
thaliana] gi|332190377|gb|AEE28498.1| DNA polymerase
delta subunit 4 [Arabidopsis thaliana]
Length = 124
Score = 122 bits (305), Expect = 2e-25
Identities = 55/89 (61%), Positives = 69/89 (77%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+A GSDV QP A +SHG S+DL ++YD +E +LRQFDMN+TYGPCLGMTR RWERA
Sbjct: 37 HAAAQGSDVTQPAALISHG-SVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAV 95
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLG+NPP +++ LL + V +CLW GRV
Sbjct: 96 RLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_002325451.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|222862326|gb|EEE99832.1| DNA polymerase delta subunit
4 family protein [Populus trichocarpa]
Length = 121
Score = 120 bits (302), Expect = 5e-25
Identities = 55/87 (63%), Positives = 66/87 (75%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+AT GSD+ QP A VSH S DL+D+YD E +LRQFDMN YGPCLGM+R RWERA
Sbjct: 34 HAATLGSDITQPTALVSHD-SPDLKDDYDKHEDVLRQFDMNPAYGPCLGMSRLARWERAQ 92
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDG 324
RLGLNPP++++ LL V +ECLWDG
Sbjct: 93 RLGLNPPKEIEGLLKGEKVRSECLWDG 119
>gb|AAM65969.1| unknown [Arabidopsis thaliana]
Length = 124
Score = 120 bits (302), Expect = 5e-25
Identities = 54/89 (60%), Positives = 69/89 (77%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+A GSDV QP A +SHG S+DL ++YD +E +LRQFDMN+TYGPCLGMTR RW+RA
Sbjct: 37 HAAAQGSDVTQPAALISHG-SVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWQRAV 95
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLG+NPP +++ LL + V +CLW GRV
Sbjct: 96 RLGMNPPNEIEKLLKTGKVQQDCLWQGRV 124
>ref|XP_002889772.1| DNA polymerase delta subunit 4 family [Arabidopsis lyrata subsp.
lyrata] gi|297335614|gb|EFH66031.1| DNA polymerase delta
subunit 4 family [Arabidopsis lyrata subsp. lyrata]
Length = 122
Score = 120 bits (301), Expect = 6e-25
Identities = 55/89 (61%), Positives = 68/89 (76%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H+A GSDV QP A +SHG SLDL ++YD +E +LRQFDMN+ YGPCLGMTR RWERA
Sbjct: 35 HAAAQGSDVIQPAALISHG-SLDLNEDYDKEEEMLRQFDMNIAYGPCLGMTRLDRWERAL 93
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLG+NPP +++ LL + V +CLW GRV
Sbjct: 94 RLGMNPPNEIEKLLKTGKVQQDCLWQGRV 122
>ref|XP_004143634.1| PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus]
gi|449523375|ref|XP_004168699.1| PREDICTED:
uncharacterized protein LOC101228956 [Cucumis sativus]
Length = 125
Score = 119 bits (299), Expect = 1e-24
Identities = 58/89 (65%), Positives = 65/89 (73%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
+SA+ GSD QP A VSHG SLDLQD+Y E LRQFDMN YGPCLGMTR RWERA
Sbjct: 38 NSASLGSDAVQPAALVSHG-SLDLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERAC 96
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
LGLNPP+D+ +LL + V ECLWD RV
Sbjct: 97 SLGLNPPKDIGTLLKAGKVQLECLWDSRV 125
>gb|EOY10253.1| Polymerase delta 4, putative [Theobroma cacao]
Length = 127
Score = 117 bits (294), Expect = 4e-24
Identities = 54/87 (62%), Positives = 66/87 (75%)
Frame = -3
Query: 578 ATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERADRL 399
ATF SD+ QP A GGSLDL+D+ D +E +LRQFDMNM YGPCLG+TR RWERA RL
Sbjct: 41 ATFSSDITQPAALTFLGGSLDLKDDSDEQEEVLRQFDMNMVYGPCLGITRMARWERAQRL 100
Query: 398 GLNPPEDVQSLLTSSDVNAECLWDGRV 318
GLNPP+++++LL V E L+DGRV
Sbjct: 101 GLNPPKEIENLLKGGTVKLESLFDGRV 127
>ref|XP_002319772.1| DNA polymerase delta subunit 4 family protein [Populus trichocarpa]
gi|118488437|gb|ABK96033.1| unknown [Populus
trichocarpa] gi|222858148|gb|EEE95695.1| DNA polymerase
delta subunit 4 family protein [Populus trichocarpa]
Length = 122
Score = 117 bits (294), Expect = 4e-24
Identities = 56/89 (62%), Positives = 65/89 (73%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H A+ GSD+ QP A VSHG S D +D YD E +LRQFDMNM YGPCLGM+R RWERA
Sbjct: 35 HIASLGSDITQPTAQVSHG-SPDHKDYYDEHEELLRQFDMNMAYGPCLGMSRLARWERAQ 93
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLGLNPP + + LL + V +EC WDGRV
Sbjct: 94 RLGLNPPNEFEGLLKAEMVQSECWWDGRV 122
>gb|ABK93288.1| unknown [Populus trichocarpa]
Length = 122
Score = 117 bits (292), Expect = 7e-24
Identities = 56/89 (62%), Positives = 65/89 (73%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
H A+ GSD+ QP A VSHG S D +D YD E +LRQFDMNM YGPCLGM+R RWERA
Sbjct: 35 HIASLGSDITQPTAQVSHG-SPDHKDYYDEHEGLLRQFDMNMAYGPCLGMSRLARWERAQ 93
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLGLNPP + + LL + V +EC WDGRV
Sbjct: 94 RLGLNPPNEFEGLLKAEMVQSECWWDGRV 122
>gb|ESW31010.1| hypothetical protein PHAVU_002G201200g [Phaseolus vulgaris]
Length = 118
Score = 116 bits (291), Expect = 9e-24
Identities = 53/89 (59%), Positives = 65/89 (73%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERAD 405
++AT GS AQ PA VS G DL+DEYD KE +LRQFD+N+ YGPC+G+TR RWERA
Sbjct: 30 NAATLGSTAAQTPALVSDAGKPDLKDEYDEKETLLRQFDLNIAYGPCVGITRLARWERAQ 89
Query: 404 RLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
R GLNPP ++QSLL S +V E LW R+
Sbjct: 90 RFGLNPPPEIQSLLKSGNVQTESLWGDRI 118
>ref|XP_003524773.1| PREDICTED: DNA polymerase delta subunit 4-like [Glycine max]
Length = 112
Score = 115 bits (289), Expect = 2e-23
Identities = 52/80 (65%), Positives = 59/80 (73%)
Frame = -3
Query: 557 AQPPACVSHGGSLDLQDEYDGKERILRQFDMNMTYGPCLGMTRTMRWERADRLGLNPPED 378
AQ PA +SHGG DL+DEY E LRQFD+NM YGPCLGMTR RWERA RLGLNPP++
Sbjct: 33 AQSPALISHGGKPDLEDEYKESEVALRQFDLNMAYGPCLGMTRLARWERAQRLGLNPPQE 92
Query: 377 VQSLLTSSDVNAECLWDGRV 318
+ LL S V E LWDGR+
Sbjct: 93 IDRLLKSGKVQTESLWDGRI 112
>ref|XP_002265281.1| PREDICTED: uncharacterized protein LOC100263057 [Vitis vinifera]
Length = 122
Score = 115 bits (289), Expect = 2e-23
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQD-EYDGKERILRQFDMNMTYGPCLGMTRTMRWERA 408
H AT GSDV QP +H +LQD EYDG E +LRQFDMNM YGPCLGM+R RWERA
Sbjct: 37 HVATLGSDVVQPSTLSAH----NLQDDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERA 92
Query: 407 DRLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLGLNPP+++++LL A+CLWDG V
Sbjct: 93 QRLGLNPPKEIETLLKQGKARADCLWDGCV 122
>emb|CBI26425.3| unnamed protein product [Vitis vinifera]
Length = 117
Score = 115 bits (289), Expect = 2e-23
Identities = 55/90 (61%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
Frame = -3
Query: 584 HSATFGSDVAQPPACVSHGGSLDLQD-EYDGKERILRQFDMNMTYGPCLGMTRTMRWERA 408
H AT GSDV QP +H +LQD EYDG E +LRQFDMNM YGPCLGM+R RWERA
Sbjct: 32 HVATLGSDVVQPSTLSAH----NLQDDEYDGNETVLRQFDMNMAYGPCLGMSRLARWERA 87
Query: 407 DRLGLNPPEDVQSLLTSSDVNAECLWDGRV 318
RLGLNPP+++++LL A+CLWDG V
Sbjct: 88 QRLGLNPPKEIETLLKQGKARADCLWDGCV 117