BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00015379
         (446 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB54574.1| Signal recognition particle 54 kDa protein [Morus...    76   5e-12
gb|EMJ05521.1| hypothetical protein PRUPE_ppa003448mg [Prunus pe...    75   9e-12
ref|XP_002322825.2| hypothetical protein POPTR_0016s07950g [Popu...    74   2e-11
gb|EOY08281.1| Chloroplast signal recognition particle 54 kDa su...    74   2e-11
ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...    72   8e-11
ref|XP_006381979.1| hypothetical protein POPTR_0006s22810g [Popu...    70   4e-10
ref|XP_002308469.2| signal recognition particle 54 kDa subunit p...    70   4e-10
ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kD...    68   1e-09
ref|XP_006341101.1| PREDICTED: signal recognition particle 54 kD...    67   2e-09
ref|XP_004303548.1| PREDICTED: signal recognition particle 54 kD...    67   2e-09
ref|XP_002530328.1| signal recognition particle protein, putativ...    66   5e-09
ref|XP_006430176.1| hypothetical protein CICLE_v10011285mg [Citr...    64   2e-08
ref|XP_004246504.1| PREDICTED: signal recognition particle 54 kD...    62   6e-08
ref|XP_004246503.1| PREDICTED: signal recognition particle 54 kD...    62   6e-08
ref|XP_006481752.1| PREDICTED: signal recognition particle 54 kD...    61   2e-07
emb|CCH47177.1| similar to signal recognition particle 54 kDa pr...    60   2e-07
ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kD...    58   1e-06

>gb|EXB54574.1| Signal recognition particle 54 kDa protein [Morus notabilis]
          Length = 572

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 42/97 (43%), Positives = 63/97 (64%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME+IQF  V+SRHFS +V+ S   ++ +++    S+   +     F S W+G  +++ LS
Sbjct: 1   MEAIQFQAVASRHFSSSVASSP--SLSTTKTLCNSKTSPR-----FSSAWSGRHLSTTLS 53

Query: 335 SKGSFASELWRVVNAKAVTVRRETRGVIRAEMFGQLT 445
           S+  F  E+W  VN+K V+ ++E RGVIRAEMFGQLT
Sbjct: 54  SRNLFTREIWSWVNSKHVSNKKEMRGVIRAEMFGQLT 90


>gb|EMJ05521.1| hypothetical protein PRUPE_ppa003448mg [Prunus persica]
          Length = 574

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME++ F TV+SRHFS         ++ ++R   +S+  +++  +   S WT S   + L+
Sbjct: 1   MEAVHFSTVASRHFSTTSH-----SVSTNRGFYDSKYAARSSTAKLGSSWTASRTPAWLT 55

Query: 335 SKGSFASELWRVVNAKAVTV-RRETRGVIRAEMFGQLT 445
           S+  F  E+W  VN+K VT+ R+E RG++RAEMFGQLT
Sbjct: 56  SRNLFTREIWGWVNSKQVTITRKELRGIVRAEMFGQLT 93


>ref|XP_002322825.2| hypothetical protein POPTR_0016s07950g [Populus trichocarpa]
           gi|550321078|gb|EEF04586.2| hypothetical protein
           POPTR_0016s07950g [Populus trichocarpa]
          Length = 599

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 51/104 (49%), Positives = 63/104 (60%), Gaps = 5/104 (4%)
 Frame = +2

Query: 149 LPMESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVS--AFFSPWTGSA-V 319
           L ME++QF TVSSRHFS        T   S  N + S   S+ R S  +F S WTGS+  
Sbjct: 22  LAMEAVQFSTVSSRHFS--------TRSLSRNNKTLSYYSSRPRYSTKSFCSSWTGSSNN 73

Query: 320 ASGLSSKGSFASELWRVVNAKA-VTVRRET-RGVIRAEMFGQLT 445
            + LSS+ SF  E+WR V  K+ VT RRE   GV++AEMFGQLT
Sbjct: 74  VTSLSSRNSFTKEMWRWVTCKSVVTFRREMGGGVVKAEMFGQLT 117


>gb|EOY08281.1| Chloroplast signal recognition particle 54 kDa subunit [Theobroma
           cacao]
          Length = 571

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 45/98 (45%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWT-GSAVASGL 331
           ME++ F TV+SRHFS   +   FT  R   N       S  + +   S W+ GS+  + L
Sbjct: 1   MEAMHFPTVASRHFS--ATSGSFTTNRKFYN-------SPRKTTLLGSTWSIGSSDFTSL 51

Query: 332 SSKGSFASELWRVVNAKAVTVRRETRGVIRAEMFGQLT 445
           SS+  F  E+W  VN+K VT+RRE RGV+RAEMFGQLT
Sbjct: 52  SSRNLFTREIWGWVNSKTVTLRREMRGVVRAEMFGQLT 89


>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Vitis vinifera]
           gi|297740127|emb|CBI30309.3| unnamed protein product
           [Vitis vinifera]
          Length = 567

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 43/97 (44%), Positives = 58/97 (59%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME++ F TV+SR FS + SPS  T    SR ++ +R             WT S +   LS
Sbjct: 1   MEAVPFSTVASRPFS-STSPSLSTPKSLSRRSTNTRCS-----------WTASKLPLPLS 48

Query: 335 SKGSFASELWRVVNAKAVTVRRETRGVIRAEMFGQLT 445
           S+  F  E+W +V +K+V+VRR+  GVIRAEMFGQLT
Sbjct: 49  SRNPFTREVWSLVKSKSVSVRRQMPGVIRAEMFGQLT 85


>ref|XP_006381979.1| hypothetical protein POPTR_0006s22810g [Populus trichocarpa]
           gi|550336890|gb|ERP59776.1| hypothetical protein
           POPTR_0006s22810g [Populus trichocarpa]
          Length = 576

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAV-ASGL 331
           ME++QF TV+SRHFS   +PS F     S +   S  ++ AR S   S WTGS+   + L
Sbjct: 1   MEAVQFSTVASRHFS---TPS-FARNNKSFSYYSSCSRNSARSSC--SSWTGSSNNVTSL 54

Query: 332 SSKGSFASELWRVVNAKA-VTVRRET-RGVIRAEMFGQLT 445
           SS+ SF  E+WR VN K+ VT+ RE   GVI+AEMFGQLT
Sbjct: 55  SSRNSFTREIWRWVNCKSVVTLGREMGGGVIKAEMFGQLT 94


>ref|XP_002308469.2| signal recognition particle 54 kDa subunit precursor family protein
           [Populus trichocarpa] gi|550336889|gb|EEE91992.2| signal
           recognition particle 54 kDa subunit precursor family
           protein [Populus trichocarpa]
          Length = 559

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAV-ASGL 331
           ME++QF TV+SRHFS   +PS F     S +   S  ++ AR S   S WTGS+   + L
Sbjct: 1   MEAVQFSTVASRHFS---TPS-FARNNKSFSYYSSCSRNSARSSC--SSWTGSSNNVTSL 54

Query: 332 SSKGSFASELWRVVNAKA-VTVRRET-RGVIRAEMFGQLT 445
           SS+ SF  E+WR VN K+ VT+ RE   GVI+AEMFGQLT
Sbjct: 55  SSRNSFTREIWRWVNCKSVVTLGREMGGGVIKAEMFGQLT 94


>ref|XP_004143384.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Cucumis sativus]
           gi|449482550|ref|XP_004156318.1| PREDICTED: signal
           recognition particle 54 kDa protein, chloroplastic-like
           [Cucumis sativus]
          Length = 572

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 40/97 (41%), Positives = 54/97 (55%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME +Q  TV+SRH +   +     A R   + S    K+    S+  S W GS+    LS
Sbjct: 1   MEGLQISTVASRHLTS--NSQSHCASRGLCHGSNCARKT----SSISSSWLGSSNLKSLS 54

Query: 335 SKGSFASELWRVVNAKAVTVRRETRGVIRAEMFGQLT 445
           S+  F  E+W  ++AK V  RR+ RGV+RAEMFGQLT
Sbjct: 55  SRNLFTREIWGWLHAKTVNTRRDMRGVVRAEMFGQLT 91


>ref|XP_006341101.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Solanum tuberosum]
          Length = 569

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 41/91 (45%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +2

Query: 176 TVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLSSKGSFAS 355
           T++S HF P           S    S S+L      S   S W G   +   SS+ SF  
Sbjct: 10  TMASHHFFPL----------SKATLSTSKLNPTCNSS---SSWIGCTHSLSFSSRNSFTR 56

Query: 356 ELWRVVNAK-AVTVRRETRGVIRAEMFGQLT 445
           + WRV+N+K  VT+RRETRGVIRAEMFGQLT
Sbjct: 57  DTWRVINSKNVVTIRRETRGVIRAEMFGQLT 87


>ref|XP_004303548.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 569

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASG-- 328
           ME++   TVSSRHFSP  + +     R S +    +         F S WT +A  S   
Sbjct: 1   MEAVHLPTVSSRHFSPTTAAT----FRDSNHIPAPK---------FGSSWTAAASRSPTR 47

Query: 329 LSSKGSFASELWRVVNAKAVTV-RRETRGVIRAEMFGQLT 445
           LSS+  F  E+W  VNAK VT  R+E RGV+RAEMFGQLT
Sbjct: 48  LSSRNLFTREIWGWVNAKKVTSGRKELRGVVRAEMFGQLT 87


>ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
           gi|223530132|gb|EEF32044.1| signal recognition particle
           protein, putative [Ricinus communis]
          Length = 572

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTG-SAVASGL 331
           ME++Q  TV+SRHFS        T++  +   +  +L +    + F S WTG S   + L
Sbjct: 1   MEAVQLSTVASRHFST-------TSLTLANTTTNLKLSN---CNKFRSSWTGCSGTVASL 50

Query: 332 SSKGSFASELWRVVNAKA--VTVRRETRGVIRAEMFGQLT 445
           SS+  F  E+WR VN K+  VT+RR+    ++AEMFGQLT
Sbjct: 51  SSRNLFTREIWRWVNCKSSVVTLRRDFHSAVKAEMFGQLT 90


>ref|XP_006430176.1| hypothetical protein CICLE_v10011285mg [Citrus clementina]
           gi|557532233|gb|ESR43416.1| hypothetical protein
           CICLE_v10011285mg [Citrus clementina]
          Length = 630

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/101 (39%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME++QF TV+SRH+S            +S+    SR+ S  + + F S W  S+  + LS
Sbjct: 60  MEAVQFSTVASRHYSA-----------TSKTFYNSRI-SAGKSAKFVSSWAASSDPARLS 107

Query: 335 S--KGSFASELWRVVNAKAVTVRRETRG--VIRAEMFGQLT 445
           S  +  F  E W ++N+K+VT+RR  R   ++RAEMFGQLT
Sbjct: 108 STSRNLFTRETWGLINSKSVTIRRNGRRRLIVRAEMFGQLT 148


>ref|XP_004246504.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like isoform 2 [Solanum lycopersicum]
          Length = 541

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/90 (44%), Positives = 48/90 (53%)
 Frame = +2

Query: 176 TVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLSSKGSFAS 355
           T++S HF P           S    S S+L      S   S W GS  +   SS+ SF  
Sbjct: 10  TMASHHFFPL----------SKATLSSSKLNPTCNSS---SSWIGSTHSLSFSSRNSFTR 56

Query: 356 ELWRVVNAKAVTVRRETRGVIRAEMFGQLT 445
           + WRV+N+K V VRRE  GVIRAEMFGQLT
Sbjct: 57  DTWRVINSKNV-VRREMSGVIRAEMFGQLT 85


>ref|XP_004246503.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like isoform 1 [Solanum lycopersicum]
          Length = 567

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 40/90 (44%), Positives = 48/90 (53%)
 Frame = +2

Query: 176 TVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLSSKGSFAS 355
           T++S HF P           S    S S+L      S   S W GS  +   SS+ SF  
Sbjct: 10  TMASHHFFPL----------SKATLSSSKLNPTCNSS---SSWIGSTHSLSFSSRNSFTR 56

Query: 356 ELWRVVNAKAVTVRRETRGVIRAEMFGQLT 445
           + WRV+N+K V VRRE  GVIRAEMFGQLT
Sbjct: 57  DTWRVINSKNV-VRREMSGVIRAEMFGQLT 85


>ref|XP_006481752.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Citrus sinensis]
          Length = 571

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME++QF TV+SRH+S            + +    SR+ S  + + F S W  S+  + LS
Sbjct: 1   MEAVQFSTVASRHYSA-----------TGKTFYNSRI-SAGKSTKFVSSWAASSDPTRLS 48

Query: 335 S--KGSFASELWRVVNAKAVTVRRETRG--VIRAEMFGQLT 445
           S  +  F  E W ++++K+VT+RR  R   V+RAEMFGQLT
Sbjct: 49  STSRNLFTRETWGLIDSKSVTIRRNGRRRLVVRAEMFGQLT 89


>emb|CCH47177.1| similar to signal recognition particle 54 kDa protein [Lupinus
           angustifolius]
          Length = 731

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 3/100 (3%)
 Frame = +2

Query: 155 MESIQFCTVSSRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLS 334
           ME++ F TV+SRHFS ++S ++  +  +      ++L S          WTGS+ +S  S
Sbjct: 1   MEALHFSTVASRHFSISLSHNRTFSSSAYSTHKPTKLSSS---------WTGSSFSS--S 49

Query: 335 SKGSFASELWRVVNAKAVTVRR---ETRGVIRAEMFGQLT 445
               F +E+W  VN+K+V++RR      G++RAEMFGQLT
Sbjct: 50  RNNLFTNEIWGWVNSKSVSLRRCRDILPGMVRAEMFGQLT 89


>ref|XP_003554443.1| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Glycine max]
          Length = 565

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/90 (44%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
 Frame = +2

Query: 185 SRHFSPAVSPSQFTAIRSSRNASESRLKSKARVSAFFSPWTGSAVASGLSSKGSFASELW 364
           SRHFS    P  F+  ++ R++S   +K         SPWT ++    L+S   FA E+W
Sbjct: 7   SRHFSTL--PLSFSQNKTLRSSSAKSIKLS-------SPWTNAS----LTSPNCFAKEVW 53

Query: 365 RVVNA--KAVTVRRETRG-VIRAEMFGQLT 445
             VN+  K V VRR+TRG V+RAEMFGQLT
Sbjct: 54  GWVNSNSKGVAVRRDTRGVVVRAEMFGQLT 83