BLASTX nr result

ID: Rheum21_contig00015192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00015192
         (301 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              56   4e-06
ref|XP_006826164.1| hypothetical protein AMTR_s05090p00005430, p...    56   6e-06
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]              55   7e-06

>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = +2

Query: 14  DSEEFLEWSRHMAYYFSQRDYDEVEQCDIAIDCLRDYAWDWWCRDEDQRSRRAWQPVETW 193
           D E +LEW   +   F+  +Y  +E+  +A    ++YA  WW +    R R A +P++TW
Sbjct: 84  DPEAYLEWETKLEQIFNCHNYSNLEKVQVASIEFKEYALVWWDQLTKDRRRYAERPIDTW 143

Query: 194 EQLVYLMTRHFSPQVDPRAYAN 259
           E++  +M R F P    R   N
Sbjct: 144 EEMKRIMRRRFVPSYYHRELHN 165


>ref|XP_006826164.1| hypothetical protein AMTR_s05090p00005430, partial [Amborella
           trichopoda] gi|548830328|gb|ERM93401.1| hypothetical
           protein AMTR_s05090p00005430, partial [Amborella
           trichopoda]
          Length = 235

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/86 (33%), Positives = 44/86 (51%)
 Frame = +2

Query: 14  DSEEFLEWSRHMAYYFSQRDYDEVEQCDIAIDCLRDYAWDWWCRDEDQRSRRAWQPVETW 193
           D E +LEW + M   F   +Y ++++  +A     DYA  WW +    R R   +P+ETW
Sbjct: 117 DPEAYLEWEKKMELVFDCHNYSDMKKVKLAAIEFTDYAIVWWDQLCTNRRRSGDRPIETW 176

Query: 194 EQLVYLMTRHFSPQVDPRAYANLSVK 271
           E +  +M R F P   P  Y +L +K
Sbjct: 177 EAMKRVMRRRFVP---PHYYRDLYLK 199


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = +2

Query: 14  DSEEFLEWSRHMAYYFSQRDYDEVEQCDIAIDCLRDYAWDWWCRDEDQRSRRAWQPVETW 193
           D E +LEW   +   F+  +Y  +E+  +A    ++YA  WW +    R R A +P++TW
Sbjct: 84  DPEAYLEWETKLEQIFNCHNYSNLEKVQVASIEFKEYALVWWDQLIKDRRRYAERPIDTW 143

Query: 194 EQLVYLMTRHFSPQVDPRAYAN 259
           E++  +M R F P    R   N
Sbjct: 144 EEMKRIMRRRFVPSYYHRELHN 165


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