BLASTX nr result
ID: Rheum21_contig00015109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00015109
(616 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group] 200 7e-56
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group... 201 9e-56
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum] 187 2e-55
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S... 184 4e-54
gb|ABA93844.2| retrotransposon protein, putative, unclassified [... 189 1e-53
ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 ... 182 1e-53
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp... 187 2e-53
ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766... 182 3e-53
ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [S... 183 1e-52
ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 ... 182 1e-52
ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [S... 182 1e-52
ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [S... 182 1e-52
gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subc... 184 1e-52
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group] 179 2e-52
ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group] g... 179 2e-52
ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 ... 185 3e-52
emb|CAE04646.2| OSJNBa0061G20.2 [Oryza sativa Japonica Group] 183 4e-52
ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [S... 179 6e-52
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja... 177 7e-52
gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group] 177 7e-52
>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
Length = 811
Score = 200 bits (508), Expect(2) = 7e-56
Identities = 93/147 (63%), Positives = 114/147 (77%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F+M DLG+LH+F G+S+ R AGL L Q QY +IL++ M+DC PC TPVDTTAKLS
Sbjct: 525 FSMKDLGALHHFLGVSVTRNSAGLVLSQRQYCIDILERAGMADCKPCNTPVDTTAKLSSS 584
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
GPPV DPT +RSLAGALQYLTFTRPDISYAVQ CL MHD R+ H+ A+KRIL Y++G+
Sbjct: 585 DGPPVADPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREPHLAALKRILRYIRGS 644
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++LGL + + S +L YSDADWAGCP
Sbjct: 645 MDLGLHIQRSSACDLAVYSDADWAGCP 671
Score = 43.9 bits (102), Expect(2) = 7e-56
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
A ++ + F + SD S+F+ + +LL+YV+DIVLTASS LH I+A+
Sbjct: 468 ATFLQSIGFVEAKSDTSLFILHRGNDTVYLLLYVDDIVLTASSRTLLHWTISAL 521
>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 1679
Score = 201 bits (511), Expect(2) = 9e-56
Identities = 93/147 (63%), Positives = 114/147 (77%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F+M DLG+LH+F G+S+ R AGL L Q QY +IL++ M+DC PC TPVDTTAKLS
Sbjct: 1393 FSMKDLGALHHFLGVSVTRNSAGLVLSQRQYCIDILERAGMADCKPCNTPVDTTAKLSSS 1452
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
GPPV DPT +RSLAGALQYLTFTRPDISYAVQ CL MHD R+ H+ A+KRIL Y++G+
Sbjct: 1453 DGPPVADPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPREPHLAALKRILHYIRGS 1512
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++LGL + + S +L YSDADWAGCP
Sbjct: 1513 VDLGLHIQRSSACDLAVYSDADWAGCP 1539
Score = 42.4 bits (98), Expect(2) = 9e-56
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = -3
Query: 605 YIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
++ + F + SD S+F+ + +LL+YV+DIVLTASS LH I+A+
Sbjct: 1338 FLQSIGFVEAKSDTSLFILHRGNDTVYLLLYVDDIVLTASSRTLLHWTISAL 1389
>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
Length = 534
Score = 187 bits (474), Expect(2) = 2e-55
Identities = 89/147 (60%), Positives = 110/147 (74%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M D+G LH+F GIS+ R+ G+ L Q QY +IL++ MS C PC TPVD +KLS+D
Sbjct: 245 FAMTDMGQLHHFLGISVTRSAKGMFLSQRQYTLDILERAGMSACKPCSTPVDLHSKLSED 304
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
GPPV D T YRSLAGALQYLTFTRPDI+YAVQ CL+MHD R+ H+ A+KRIL Y++GT
Sbjct: 305 -GPPVGDATQYRSLAGALQYLTFTRPDIAYAVQQICLYMHDPREPHLAALKRILRYLQGT 363
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
LGL + + S +EL Y+DADWAGCP
Sbjct: 364 TTLGLTMCRSSPTELVVYTDADWAGCP 390
Score = 55.8 bits (133), Expect(2) = 2e-55
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAMIR 444
A+Y+ + F + SD S+F++R S A+LL+YV+DIVLTASS FL Q+I A+ R
Sbjct: 188 ASYLSSIGFVETKSDSSLFIYRRGSDTAYLLLYVDDIVLTASSAQFLRQVIVALQR 243
>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
gi|241937618|gb|EES10763.1| hypothetical protein
SORBIDRAFT_06g016046 [Sorghum bicolor]
Length = 856
Score = 184 bits (468), Expect(2) = 4e-54
Identities = 88/147 (59%), Positives = 110/147 (74%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F G++++R L L Q QY +IL + MSDC PC TPVDT AK+S D
Sbjct: 574 FAMKDLGPLHHFLGVAVQRHKDQLTLSQRQYTLDILARHGMSDCKPCTTPVDTCAKVSAD 633
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
AGP V DPT YRSLAGALQYLTFTRPDI+YAVQ CL MHD R+ H++A KRIL Y++GT
Sbjct: 634 AGPAVADPTAYRSLAGALQYLTFTRPDIAYAVQQICLHMHDPREAHLVAAKRILRYLQGT 693
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++ GL + + + ++L Y+DADWAGCP
Sbjct: 694 LHFGLIIPRSAPTQLVVYTDADWAGCP 720
Score = 53.5 bits (127), Expect(2) = 4e-54
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
A++++ L F + SD S+F++R + +LL+YV+DIVLTASS LH++I A+
Sbjct: 517 ASFLLSLGFSEAKSDTSLFIYRRGTETVYLLLYVDDIVLTASSIQLLHRVIAAL 570
>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1099
Score = 189 bits (481), Expect(2) = 1e-53
Identities = 91/147 (61%), Positives = 110/147 (74%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F+M DLG+LH+F GI++ +GL L Q QY+ EIL++ MSDC PC TPVDT AKLS
Sbjct: 813 FSMKDLGTLHHFLGITVTSDSSGLLLSQRQYSIEILERAGMSDCKPCSTPVDTNAKLSST 872
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DPT YRSLA ALQYLTFTRPDISY VQ CL MHD RD H+ +KRIL YV+GT
Sbjct: 873 DGSPVLDPTDYRSLASALQYLTFTRPDISYVVQQVCLHMHDPRDSHLATLKRILRYVRGT 932
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++LGL + +++L AYSDA+WAGCP
Sbjct: 933 LDLGLHIRHSPSTDLVAYSDANWAGCP 959
Score = 47.0 bits (110), Expect(2) = 1e-53
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
A+Y++ L F + SD S+F++ S +LL+YV+DIVLTASS L I A+
Sbjct: 756 ASYLLTLGFTKAKSDTSLFIYHRGSDLVYLLLYVDDIVLTASSAGLLRWAIQAL 809
>ref|XP_002489126.1| hypothetical protein SORBIDRAFT_0019s003280 [Sorghum bicolor]
gi|241947225|gb|EES20370.1| hypothetical protein
SORBIDRAFT_0019s003280 [Sorghum bicolor]
Length = 761
Score = 182 bits (463), Expect(2) = 1e-53
Identities = 88/147 (59%), Positives = 107/147 (72%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F G+ +++ L L Q QY +I+ + MSDC PC TPVDT AK+S
Sbjct: 465 FAMKDLGPLHHFLGMHVEQQGNSLFLSQRQYTLDIITRNGMSDCKPCSTPVDTCAKVSAS 524
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
GP V DPT YRSLAGALQYLTFTRPDI+YAVQ CL MHD R+ H+ A KRIL Y+KGT
Sbjct: 525 DGPSVTDPTAYRSLAGALQYLTFTRPDIAYAVQQICLHMHDPRESHLTAAKRILRYLKGT 584
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++ GL + + S S+LT Y+DADWAGCP
Sbjct: 585 LDYGLVIPRSSPSQLTVYTDADWAGCP 611
Score = 53.9 bits (128), Expect(2) = 1e-53
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
A++++ L F + SD S+F+F + A+LL+YV+DIVLTASS LH++I A+
Sbjct: 408 ASHLLSLGFSEARSDTSLFIFHRGTETAYLLLYVDDIVLTASSQQLLHRVIEAL 461
>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 1296
Score = 187 bits (475), Expect(2) = 2e-53
Identities = 90/147 (61%), Positives = 110/147 (74%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M D G LH+F GI+++R + L L Q YA +IL + M++CNPC TPVD KL+ D
Sbjct: 1014 FEMSDQGPLHHFLGITVQRDKSSLFLHQHNYAADILHRANMTNCNPCLTPVDMKQKLAAD 1073
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
PPV DPT YRSLAGALQYLTFTRPDIS+AVQ CLFMHD R+ H+ A+K IL Y+KGT
Sbjct: 1074 GSPPVADPTFYRSLAGALQYLTFTRPDISFAVQQICLFMHDPREAHLNALKIILRYIKGT 1133
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
I+ G+ +TK ++ ELT YSDADWAGCP
Sbjct: 1134 ISHGIHMTKPTSFELTTYSDADWAGCP 1160
Score = 48.1 bits (113), Expect(2) = 2e-53
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
A + RL FK S SD S+FV + S A+LL+YV+DI+LTASS A L +I ++
Sbjct: 957 ATFARRLGFKQSLSDNSLFVLCNGSDLAYLLLYVDDIILTASSPALLQRITKSL 1010
>ref|XP_004966833.1| PREDICTED: uncharacterized protein LOC101766505 [Setaria italica]
Length = 943
Score = 182 bits (462), Expect(2) = 3e-53
Identities = 87/147 (59%), Positives = 110/147 (74%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F+M D+G+LH+F G+S+ R L L Q+QY +IL + M DC PC TPVDT AKL D
Sbjct: 743 FSMTDMGALHHFLGVSVDRRSDELFLSQKQYMLDILDRAGMRDCKPCSTPVDTHAKLPAD 802
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV D +HYRS+AGALQYLTFTRPDI+YAVQ CL+MHD R+ H+ A+KRIL Y++G+
Sbjct: 803 -GVPVADSSHYRSIAGALQYLTFTRPDIAYAVQQVCLYMHDPREPHLAAMKRILRYIQGS 861
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+ LG L + S ++LT YSDADWAGCP
Sbjct: 862 LELGFHLHRTSPTDLTVYSDADWAGCP 888
Score = 52.8 bits (125), Expect(2) = 3e-53
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAMIR 444
A++I L F S +D S+F++R + A LL+YV+DIVLTASS +FL +II A+ R
Sbjct: 686 ASHITSLGFVESKADTSLFIYRRGADTAFLLLYVDDIVLTASSQSFLQRIIAALQR 741
>ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
gi|241943826|gb|EES16971.1| hypothetical protein
SORBIDRAFT_08g010840 [Sorghum bicolor]
Length = 725
Score = 183 bits (465), Expect(2) = 1e-52
Identities = 89/147 (60%), Positives = 108/147 (73%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GIS+ R+ GL L Q QYA ++LQK M++C+ TPVD+ AKLS
Sbjct: 525 FAMTDLGELHHFLGISVTRSSDGLFLSQRQYAVDLLQKAGMAECHSTSTPVDSRAKLSAT 584
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DP+ YRSLAG+LQYLT TRPD++YAVQ CLFMHD R+ H+ IKRIL YVKGT
Sbjct: 585 EGAPVADPSAYRSLAGSLQYLTLTRPDLAYAVQQVCLFMHDPREAHLALIKRILRYVKGT 644
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++ GL + G +L AYSDADWAGCP
Sbjct: 645 LSAGLHIGTGPVDKLIAYSDADWAGCP 671
Score = 49.7 bits (117), Expect(2) = 1e-52
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQII 459
A Y+ +L F S +D S+FV+ + A+LL+YV+DIVLTASS A L II
Sbjct: 468 ATYVRQLGFVASATDTSLFVYTEGGASAYLLLYVDDIVLTASSDALLRCII 518
>ref|XP_002489074.1| hypothetical protein SORBIDRAFT_0139s002040 [Sorghum bicolor]
gi|241947124|gb|EES20269.1| hypothetical protein
SORBIDRAFT_0139s002040 [Sorghum bicolor]
Length = 1822
Score = 182 bits (463), Expect(2) = 1e-52
Identities = 88/148 (59%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F G++++ AGL L Q QY +IL++ M+DC PC TPVDT KLS+
Sbjct: 1533 FAMKDLGQLHHFLGVTVEPHPAGLLLHQRQYTLDILERAGMTDCKPCSTPVDTQGKLSEA 1592
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DPT YRSLAGALQYLTFTRPDI+YAVQ CL MHD R+ H+ A+KRIL Y++G+
Sbjct: 1593 EGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHMHDPREPHLTALKRILRYLRGS 1652
Query: 81 INLGLQL-TKGSTSELTAYSDADWAGCP 1
++ GL L + S++EL Y+DADWAGCP
Sbjct: 1653 VDFGLLLHRRSSSTELVVYTDADWAGCP 1680
Score = 50.1 bits (118), Expect(2) = 1e-52
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
AA+++ L F + SD S+F++ + A+LL+YV+DIVLTASS + L +II ++
Sbjct: 1476 AAFLLTLGFVEAKSDTSLFIYHYGAETAYLLLYVDDIVLTASSESLLRRIIASL 1529
>ref|XP_002460196.1| hypothetical protein SORBIDRAFT_02g024427 [Sorghum bicolor]
gi|241923573|gb|EER96717.1| hypothetical protein
SORBIDRAFT_02g024427 [Sorghum bicolor]
Length = 1575
Score = 182 bits (463), Expect(2) = 1e-52
Identities = 88/148 (59%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F G++++ AGL L Q QY +IL++ M+DC PC TPVDT KLS+
Sbjct: 1286 FAMKDLGQLHHFLGVTVEPHPAGLLLHQRQYTLDILERAGMTDCKPCSTPVDTQGKLSEA 1345
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DPT YRSLAGALQYLTFTRPDI+YAVQ CL MHD R+ H+ A+KRIL Y++G+
Sbjct: 1346 EGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHMHDPREPHLTALKRILRYLRGS 1405
Query: 81 INLGLQL-TKGSTSELTAYSDADWAGCP 1
++ GL L + S++EL Y+DADWAGCP
Sbjct: 1406 VDFGLLLHRRSSSTELVVYTDADWAGCP 1433
Score = 50.1 bits (118), Expect(2) = 1e-52
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
AA+++ L F + SD S+F++ + A+LL+YV+DIVLTASS + L +II ++
Sbjct: 1229 AAFLLTLGFVEAKSDTSLFIYHYGAETAYLLLYVDDIVLTASSESLLRRIIASL 1282
>ref|XP_002456118.1| hypothetical protein SORBIDRAFT_03g030787 [Sorghum bicolor]
gi|241928093|gb|EES01238.1| hypothetical protein
SORBIDRAFT_03g030787 [Sorghum bicolor]
Length = 1567
Score = 182 bits (463), Expect(2) = 1e-52
Identities = 88/148 (59%), Positives = 111/148 (75%), Gaps = 1/148 (0%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F G++++ AGL L Q QY +IL++ M+DC PC TPVDT KLS+
Sbjct: 1278 FAMKDLGQLHHFLGVTVEPHPAGLLLHQRQYTLDILERAGMTDCKPCSTPVDTQGKLSEA 1337
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DPT YRSLAGALQYLTFTRPDI+YAVQ CL MHD R+ H+ A+KRIL Y++G+
Sbjct: 1338 EGTPVTDPTAYRSLAGALQYLTFTRPDITYAVQQICLHMHDPREPHLTALKRILRYLRGS 1397
Query: 81 INLGLQL-TKGSTSELTAYSDADWAGCP 1
++ GL L + S++EL Y+DADWAGCP
Sbjct: 1398 VDFGLLLHRRSSSTELVVYTDADWAGCP 1425
Score = 50.1 bits (118), Expect(2) = 1e-52
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
AA+++ L F + SD S+F++ + A+LL+YV+DIVLTASS + L +II ++
Sbjct: 1221 AAFLLTLGFVEAKSDTSLFIYHYGAETAYLLLYVDDIVLTASSESLLRRIIASL 1274
>gb|ABF95666.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 976
Score = 184 bits (468), Expect(2) = 1e-52
Identities = 88/147 (59%), Positives = 109/147 (74%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F+M DLG L++F GI++ GL L Q QY EIL++ MSDC PC TPVDT+AK S +
Sbjct: 680 FSMKDLGPLNHFLGINVTPHSGGLLLTQRQYCLEILERAGMSDCKPCLTPVDTSAKFSTE 739
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
P V DPT +RSLAGALQYLTFTRPDISYAVQ CL MHD R+ H+ A+KRIL Y++GT
Sbjct: 740 GSPSVSDPTDFRSLAGALQYLTFTRPDISYAVQQVCLHMHDPRESHLTALKRILRYIRGT 799
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+ GL + + S+ +L AYSDA+WAGCP
Sbjct: 800 LEYGLHIQRSSSFDLMAYSDANWAGCP 826
Score = 48.1 bits (113), Expect(2) = 1e-52
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
A +++ + F + SD S+FV+R S +LL+YV+DIVLTASS+ L IT++
Sbjct: 623 AMFLLSIGFTEAKSDTSLFVYRHGSDTVYLLLYVDDIVLTASSSNILRWTITSL 676
>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1480
Score = 179 bits (455), Expect(2) = 2e-52
Identities = 86/147 (58%), Positives = 105/147 (71%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GIS+ R+ GL L Q QY ++L++ MS+C+ TPVD +KLS
Sbjct: 1184 FAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDLLKRAGMSECHSTATPVDARSKLSAT 1243
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DPT YRSL GALQYLT TRP+++YAVQ CLFMHD R+ H+ IKRIL Y+KGT
Sbjct: 1244 DGAPVSDPTEYRSLVGALQYLTLTRPELAYAVQQVCLFMHDPREPHLALIKRILRYIKGT 1303
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+++GL L LTAYSDADWAGCP
Sbjct: 1304 LHIGLHLGTTPVDSLTAYSDADWAGCP 1330
Score = 52.8 bits (125), Expect(2) = 2e-52
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQI 462
A YI +L F S S+ S+FV++D A+LL+YV+DI+LTASS LH I
Sbjct: 1127 ATYIRQLGFTSSASNTSLFVYKDGDNIAYLLLYVDDIILTASSATLLHHI 1176
>ref|NP_001174286.1| Os05g0235100 [Oryza sativa Japonica Group]
gi|255676152|dbj|BAH93014.1| Os05g0235100, partial
[Oryza sativa Japonica Group]
Length = 841
Score = 179 bits (455), Expect(2) = 2e-52
Identities = 86/147 (58%), Positives = 105/147 (71%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GIS+ R+ GL L Q QY ++L++ MS+C+ TPVD +KLS
Sbjct: 545 FAMTDLGDLHFFLGISVTRSSDGLFLSQRQYVVDLLKRAGMSECHSTATPVDARSKLSAT 604
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DPT YRSL GALQYLT TRP+++YAVQ CLFMHD R+ H+ IKRIL Y+KGT
Sbjct: 605 DGAPVSDPTEYRSLVGALQYLTLTRPELAYAVQQVCLFMHDPREPHLALIKRILRYIKGT 664
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+++GL L LTAYSDADWAGCP
Sbjct: 665 LHIGLHLGTTPVDSLTAYSDADWAGCP 691
Score = 52.8 bits (125), Expect(2) = 2e-52
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQI 462
A YI +L F S S+ S+FV++D A+LL+YV+DI+LTASS LH I
Sbjct: 488 ATYIRQLGFTSSASNTSLFVYKDGDNIAYLLLYVDDIILTASSATLLHHI 537
>ref|XP_002489193.1| hypothetical protein SORBIDRAFT_0013s009070 [Sorghum bicolor]
gi|241947143|gb|EES20288.1| hypothetical protein
SORBIDRAFT_0013s009070 [Sorghum bicolor]
Length = 1219
Score = 185 bits (470), Expect(2) = 3e-52
Identities = 90/147 (61%), Positives = 106/147 (72%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GI++ RT GL L Q QYA E+LQ M++C+ TPVDT AKLS
Sbjct: 484 FAMTDLGDLHHFLGIAVTRTTGGLFLSQRQYAVELLQHAGMAECHSTATPVDTRAKLSAT 543
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV D T YRSLAGALQYLT TRPD++YAVQ CLFMHD R+ H+ +KR+L YVKGT
Sbjct: 544 DGAPVADATQYRSLAGALQYLTLTRPDLAYAVQQVCLFMHDPREPHLAMLKRVLRYVKGT 603
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++ GL + G LTAYSDADWAGCP
Sbjct: 604 LSTGLHIGVGGLDTLTAYSDADWAGCP 630
Score = 46.6 bits (109), Expect(2) = 3e-52
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = -3
Query: 608 AYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQI 462
+++ + F S SD S+FV+++ + A+LL+YV+DI+LTASS A L +I
Sbjct: 428 SFVQQSGFTASTSDSSLFVYKEGADTAYLLLYVDDIILTASSPALLRRI 476
>emb|CAE04646.2| OSJNBa0061G20.2 [Oryza sativa Japonica Group]
Length = 542
Score = 183 bits (464), Expect(2) = 4e-52
Identities = 86/147 (58%), Positives = 103/147 (70%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG +H+F GI ++RT G L QEQYA ++L + ++DC P TP+DT AK+S
Sbjct: 244 FAMKDLGPVHFFLGIQVRRTADGFFLSQEQYAGDVLDRAGLADCKPAPTPIDTKAKVSST 303
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G P DPT YRS+ GALQYLT TRPD+SYAVQ CL MH RD H +KRIL YV+GT
Sbjct: 304 TGQPYSDPTFYRSIVGALQYLTLTRPDLSYAVQQVCLHMHSPRDVHWTLVKRILRYVRGT 363
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+ GLQL + ST LTAYSD DWAGCP
Sbjct: 364 THKGLQLRRSSTPSLTAYSDVDWAGCP 390
Score = 48.1 bits (113), Expect(2) = 4e-52
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = -3
Query: 605 YIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQIITAM 450
++ L F S SD S+FV R + EAHLL+YV+DIVL ASS L II +
Sbjct: 189 HLHHLGFVSSKSDNSLFVLRRGTDEAHLLLYVDDIVLAASSQRLLQHIINQL 240
>ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
gi|241935390|gb|EES08535.1| hypothetical protein
SORBIDRAFT_05g018930 [Sorghum bicolor]
Length = 619
Score = 179 bits (455), Expect(2) = 6e-52
Identities = 88/147 (59%), Positives = 107/147 (72%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GIS+ R+ GL L Q QYA ++LQK M++C+ TPVD+ AKLS
Sbjct: 324 FAMTDLGELHHFLGISVTRSSDGLFLSQRQYAVDLLQKAGMAECHLTSTPVDSRAKLSAT 383
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DP+ YRSLAG+LQYLT TRPD++YAVQ CLFMHD R+ H+ IKRIL YVKGT
Sbjct: 384 EGTPVADPSAYRSLAGSLQYLTLTRPDLAYAVQQVCLFMHDPREAHLALIKRILRYVKGT 443
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
++ GL + G +L AYSDADWA CP
Sbjct: 444 LSAGLHIGTGPVDKLIAYSDADWARCP 470
Score = 51.2 bits (121), Expect(2) = 6e-52
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQII 459
A Y+ +L F S +D S+FV+ + A+LL+YV+DIVLTASS A L +II
Sbjct: 267 ATYVRQLGFVASATDSSLFVYTEGGASAYLLLYVDDIVLTASSDALLRRII 317
>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
Length = 1250
Score = 177 bits (449), Expect(2) = 7e-52
Identities = 84/147 (57%), Positives = 104/147 (70%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GIS+ R+ GL L Q QYA ++L++ MS+C+P TPVD KLS
Sbjct: 1054 FAMTDLGDLHFFLGISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVDARCKLSAT 1113
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DP YRSLAGALQYLT TRP+I+YA+Q CLFMHD R+ H+ +KRIL Y+KGT
Sbjct: 1114 DGAPVSDPMEYRSLAGALQYLTLTRPEIAYAIQQVCLFMHDPREPHLALVKRILRYIKGT 1173
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+++ L + LTAYSDADW GCP
Sbjct: 1174 LHICLHIGTAPVDSLTAYSDADWVGCP 1200
Score = 53.1 bits (126), Expect(2) = 7e-52
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQI 462
A YI +L F S SD S+F+++D A+LL+YV+DI+LTASST+ L I
Sbjct: 997 ATYIRQLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHI 1046
>gb|AAN34944.1| Putative retroelement [Oryza sativa Japonica Group]
Length = 1146
Score = 177 bits (449), Expect(2) = 7e-52
Identities = 84/147 (57%), Positives = 104/147 (70%)
Frame = -2
Query: 441 FTMMDLGSLHYFPGISIKRTIAGLHLCQEQYAKEILQKVAMSDCNPCRTPVDTTAKLSQD 262
F M DLG LH+F GIS+ R+ GL L Q QYA ++L++ MS+C+P TPVD KLS
Sbjct: 950 FAMTDLGDLHFFLGISVTRSADGLFLSQWQYAVDLLRRAGMSECHPTATPVDARCKLSAT 1009
Query: 261 AGPPVPDPTHYRSLAGALQYLTFTRPDISYAVQ**CLFMHDLRDKHMMAIKRILWYVKGT 82
G PV DP YRSLAGALQYLT TRP+I+YA+Q CLFMHD R+ H+ +KRIL Y+KGT
Sbjct: 1010 DGAPVSDPMEYRSLAGALQYLTLTRPEIAYAIQQVCLFMHDPREPHLALVKRILRYIKGT 1069
Query: 81 INLGLQLTKGSTSELTAYSDADWAGCP 1
+++ L + LTAYSDADW GCP
Sbjct: 1070 LHICLHIGTAPVDSLTAYSDADWVGCP 1096
Score = 53.1 bits (126), Expect(2) = 7e-52
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = -3
Query: 611 AAYIIRLDFKGSHSDPSMFVFRDCSREAHLLVYVNDIVLTASSTAFLHQI 462
A YI +L F S SD S+F+++D A+LL+YV+DI+LTASST+ L I
Sbjct: 893 ATYIRQLGFTSSASDTSLFIYKDGDNVAYLLLYVDDILLTASSTSLLQHI 942