BLASTX nr result
ID: Rheum21_contig00015078
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00015078
(307 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343594.1| PREDICTED: uncharacterized protein LOC102598... 84 3e-20
ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251... 84 5e-20
emb|CAN66178.1| hypothetical protein VITISV_017836 [Vitis vinifera] 82 2e-19
ref|XP_004242624.1| PREDICTED: uncharacterized protein LOC101252... 84 2e-19
dbj|BAO49743.1| nuclear pore complex protein Nup43a [Nicotiana b... 83 7e-19
ref|XP_006474055.1| PREDICTED: nucleoporin Nup43-like [Citrus si... 81 9e-18
ref|XP_006453551.1| hypothetical protein CICLE_v10008825mg [Citr... 81 1e-17
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795... 80 1e-17
ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyr... 81 2e-17
ref|XP_002528391.1| conserved hypothetical protein [Ricinus comm... 82 2e-17
ref|NP_567858.1| transducin/WD40 domain-containing protein [Arab... 81 3e-17
gb|AAM63718.1| unknown [Arabidopsis thaliana] 81 3e-17
ref|XP_006412663.1| hypothetical protein EUTSA_v10025548mg [Eutr... 81 4e-17
ref|XP_006285253.1| hypothetical protein CARUB_v10006618mg [Caps... 81 6e-17
ref|XP_002309368.2| WD-40 repeat family protein [Populus trichoc... 81 1e-16
gb|ESW26850.1| hypothetical protein PHAVU_003G153400g [Phaseolus... 78 1e-16
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3... 79 2e-16
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max] 80 3e-16
gb|EMJ23426.1| hypothetical protein PRUPE_ppa007862mg [Prunus pe... 80 5e-16
ref|XP_003573628.1| PREDICTED: uncharacterized protein LOC100834... 75 2e-15
>ref|XP_006343594.1| PREDICTED: uncharacterized protein LOC102598589 [Solanum tuberosum]
Length = 358
Score = 84.0 bits (206), Expect(2) = 3e-20
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAVIE+G EP+ELLAEPCAINS DID+QNPS+I+C LEWES+A
Sbjct: 308 DGILAVIEQGEEPVELLAEPCAINSFDIDRQNPSDIVCSLEWESIA 353
Score = 40.0 bits (92), Expect(2) = 3e-20
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYDXXXXXXXXXXXXXSRTLPVMM 173
SGVG ++ SPSES+VWEVQYD SR LP M+
Sbjct: 260 SGVGTSDLSALSPSESDVWEVQYDNYTTSSNYRNVSESRVLPAMI 304
>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
gi|297743697|emb|CBI36580.3| unnamed protein product
[Vitis vinifera]
Length = 357
Score = 84.0 bits (206), Expect(2) = 5e-20
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAV+E+G EPIELLAEPCAINS DID+QNPS++IC LEWES+A
Sbjct: 307 DGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDVICSLEWESIA 352
Score = 39.3 bits (90), Expect(2) = 5e-20
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYDXXXXXXXXXXXXXSRTLPVMM 173
SGVG +E SP ESEVWEV+YD SR LP M+
Sbjct: 259 SGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAML 303
>emb|CAN66178.1| hypothetical protein VITISV_017836 [Vitis vinifera]
Length = 405
Score = 82.0 bits (201), Expect(2) = 2e-19
Identities = 36/46 (78%), Positives = 42/46 (91%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAV+E+G EPIELLAEPCAINS DID+QNP ++IC LEWES+A
Sbjct: 355 DGILAVVEQGEEPIELLAEPCAINSFDIDRQNPXDVICSLEWESIA 400
Score = 39.3 bits (90), Expect(2) = 2e-19
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYDXXXXXXXXXXXXXSRTLPVMM 173
SGVG +E SP ESEVWEV+YD SR LP M+
Sbjct: 307 SGVGTSEVATHSPCESEVWEVKYDPYMRTSNFGNMSSSRILPAML 351
>ref|XP_004242624.1| PREDICTED: uncharacterized protein LOC101252300 [Solanum
lycopersicum]
Length = 358
Score = 83.6 bits (205), Expect(2) = 2e-19
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAVIE+G EP+ELLAEPCAINS DID+QNPS I+C LEWES+A
Sbjct: 308 DGILAVIEQGEEPVELLAEPCAINSFDIDRQNPSEIVCSLEWESIA 353
Score = 37.7 bits (86), Expect(2) = 2e-19
Identities = 20/45 (44%), Positives = 24/45 (53%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYDXXXXXXXXXXXXXSRTLPVMM 173
SGVG ++ SP ES+VWEVQYD SR LP M+
Sbjct: 260 SGVGTSDLSALSPLESDVWEVQYDNYTTSSNYRNMSESRVLPAMI 304
>dbj|BAO49743.1| nuclear pore complex protein Nup43a [Nicotiana benthamiana]
Length = 362
Score = 82.8 bits (203), Expect(2) = 7e-19
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAVIE+G EP ELLAEPCAINS DID+QNPS+IIC LEWES+A
Sbjct: 312 DGILAVIEQGEEPCELLAEPCAINSFDIDRQNPSDIICSLEWESIA 357
Score = 36.6 bits (83), Expect(2) = 7e-19
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYDXXXXXXXXXXXXXSRTLPVMM 173
+GVG ++ SPSES+VWEV YD SR LP M+
Sbjct: 264 AGVGTSDFSALSPSESDVWEVHYDNYTTSSNCRSISESRVLPAMI 308
>ref|XP_006474055.1| PREDICTED: nucleoporin Nup43-like [Citrus sinensis]
Length = 373
Score = 81.3 bits (199), Expect(2) = 9e-18
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAV+E+G EP ELLAEPCAINS DID QNPS++IC LEWES+A
Sbjct: 323 DGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIA 368
Score = 34.3 bits (77), Expect(2) = 9e-18
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG E S SESEVWEVQYD
Sbjct: 278 SGVGTGEAVTHSLSESEVWEVQYD 301
>ref|XP_006453551.1| hypothetical protein CICLE_v10008825mg [Citrus clementina]
gi|557556777|gb|ESR66791.1| hypothetical protein
CICLE_v10008825mg [Citrus clementina]
Length = 343
Score = 81.3 bits (199), Expect(2) = 1e-17
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAV+E+G EP ELLAEPCAINS DID QNPS++IC LEWES+A
Sbjct: 293 DGILAVVEQGEEPFELLAEPCAINSFDIDPQNPSDVICSLEWESIA 338
Score = 34.3 bits (77), Expect(2) = 1e-17
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG E S SESEVWEVQYD
Sbjct: 248 SGVGTGEAVTHSLSESEVWEVQYD 271
>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
Length = 346
Score = 80.1 bits (196), Expect(2) = 1e-17
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL VIE+G EPIELLAEPCAINS DID+ NPS++IC LEWE+VA
Sbjct: 296 DGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVA 341
Score = 35.0 bits (79), Expect(2) = 1e-17
Identities = 16/24 (66%), Positives = 16/24 (66%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SG G QS SESEVWEVQYD
Sbjct: 252 SGAGAANTAVQSISESEVWEVQYD 275
>ref|XP_002867327.1| WD-40 repeat protein family [Arabidopsis lyrata subsp. lyrata]
gi|297313163|gb|EFH43586.1| WD-40 repeat protein family
[Arabidopsis lyrata subsp. lyrata]
Length = 362
Score = 81.3 bits (199), Expect(2) = 2e-17
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL VIE+G EPIELLAEPCAINS DID+QNP ++IC LEWES+A
Sbjct: 312 DGILGVIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIA 357
Score = 33.1 bits (74), Expect(2) = 2e-17
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG +E SESEVWEVQYD
Sbjct: 267 SGVGASENINNPLSESEVWEVQYD 290
>ref|XP_002528391.1| conserved hypothetical protein [Ricinus communis]
gi|223532179|gb|EEF33984.1| conserved hypothetical
protein [Ricinus communis]
Length = 354
Score = 82.4 bits (202), Expect(2) = 2e-17
Identities = 38/46 (82%), Positives = 42/46 (91%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAVIE+G EPIELLAEPCAINS DID QNPS++IC LEWES+A
Sbjct: 304 DGILAVIEQGEEPIELLAEPCAINSFDIDCQNPSDVICSLEWESIA 349
Score = 32.0 bits (71), Expect(2) = 2e-17
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGV + + S SES+VWEVQYD
Sbjct: 257 SGVELNDTATHSLSESDVWEVQYD 280
>ref|NP_567858.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|90093296|gb|ABD85161.1| At4g30840 [Arabidopsis
thaliana] gi|332660417|gb|AEE85817.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 361
Score = 80.9 bits (198), Expect(2) = 3e-17
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL +IE+G EPIELLAEPCAINS DID+QNP ++IC LEWES+A
Sbjct: 311 DGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIA 356
Score = 33.1 bits (74), Expect(2) = 3e-17
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG +E SESEVWEVQYD
Sbjct: 267 SGVGASENINNPLSESEVWEVQYD 290
>gb|AAM63718.1| unknown [Arabidopsis thaliana]
Length = 358
Score = 80.9 bits (198), Expect(2) = 3e-17
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL +IE+G EPIELLAEPCAINS DID+QNP ++IC LEWES+A
Sbjct: 308 DGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIA 353
Score = 33.1 bits (74), Expect(2) = 3e-17
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG +E SESEVWEVQYD
Sbjct: 264 SGVGASENINNPLSESEVWEVQYD 287
>ref|XP_006412663.1| hypothetical protein EUTSA_v10025548mg [Eutrema salsugineum]
gi|557113833|gb|ESQ54116.1| hypothetical protein
EUTSA_v10025548mg [Eutrema salsugineum]
Length = 360
Score = 80.9 bits (198), Expect(2) = 4e-17
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL +IE+G EPIELLAEPCAINS DID+QNP ++IC LEWES+A
Sbjct: 310 DGILGIIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIA 355
Score = 32.7 bits (73), Expect(2) = 4e-17
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG +E SESEVWEVQYD
Sbjct: 266 SGVGSSESVNNPLSESEVWEVQYD 289
>ref|XP_006285253.1| hypothetical protein CARUB_v10006618mg [Capsella rubella]
gi|482553958|gb|EOA18151.1| hypothetical protein
CARUB_v10006618mg [Capsella rubella]
Length = 358
Score = 81.3 bits (199), Expect(2) = 6e-17
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL VIE+G EPIELLAEPCAINS DID+QNP ++IC LEWES+A
Sbjct: 308 DGILGVIEQGEEPIELLAEPCAINSFDIDRQNPQDVICSLEWESIA 353
Score = 31.6 bits (70), Expect(2) = 6e-17
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG +E SESEVWEV+YD
Sbjct: 264 SGVGASENINNPLSESEVWEVKYD 287
>ref|XP_002309368.2| WD-40 repeat family protein [Populus trichocarpa]
gi|550336653|gb|EEE92891.2| WD-40 repeat family protein
[Populus trichocarpa]
Length = 360
Score = 80.9 bits (198), Expect(2) = 1e-16
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESV 6
DGILAVIE+G EP ELLAEPCAINS DID+QNPS++IC LEWES+
Sbjct: 310 DGILAVIEQGEEPTELLAEPCAINSFDIDRQNPSDVICSLEWESI 354
Score = 31.2 bits (69), Expect(2) = 1e-16
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
S +G ++ Q SESEVWEVQYD
Sbjct: 263 SSIGSSDTMTQPLSESEVWEVQYD 286
>gb|ESW26850.1| hypothetical protein PHAVU_003G153400g [Phaseolus vulgaris]
Length = 348
Score = 78.2 bits (191), Expect(2) = 1e-16
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAVIE+G EP+ELLAE CAINS DID+ NPS++IC LEWE+VA
Sbjct: 298 DGILAVIEQGEEPVELLAEACAINSFDIDRHNPSDVICSLEWEAVA 343
Score = 33.5 bits (75), Expect(2) = 1e-16
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
+G G+ QS SESEVWEVQYD
Sbjct: 254 AGTGVGNSMVQSISESEVWEVQYD 277
>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
Nucleoporin Nup43 [Medicago truncatula]
Length = 351
Score = 79.0 bits (193), Expect(2) = 2e-16
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL VIE+G EPIELLAEPCAINS DID+ NP ++IC LEWESVA
Sbjct: 301 DGILGVIEQGEEPIELLAEPCAINSFDIDRHNPLDVICSLEWESVA 346
Score = 32.0 bits (71), Expect(2) = 2e-16
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
+G G QS SESEVWEVQYD
Sbjct: 257 AGDGAGNTAVQSISESEVWEVQYD 280
>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
Length = 347
Score = 80.1 bits (196), Expect(2) = 3e-16
Identities = 36/46 (78%), Positives = 41/46 (89%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGIL VIE+G EPIELLAEPCAINS DID+ NPS++IC LEWE+VA
Sbjct: 297 DGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDVICSLEWEAVA 342
Score = 30.4 bits (67), Expect(2) = 3e-16
Identities = 17/27 (62%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = -1
Query: 307 SGVGITERG---FQSPSESEVWEVQYD 236
SG G G QS SESEVWEVQYD
Sbjct: 250 SGAGAGAGGNTAVQSISESEVWEVQYD 276
>gb|EMJ23426.1| hypothetical protein PRUPE_ppa007862mg [Prunus persica]
Length = 353
Score = 80.5 bits (197), Expect(2) = 5e-16
Identities = 35/46 (76%), Positives = 42/46 (91%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESVA 3
DGILAV+E+G EP+ELLAEPCAINS DID+Q PS++IC LEWES+A
Sbjct: 303 DGILAVVEQGEEPVELLAEPCAINSFDIDRQYPSDVICSLEWESIA 348
Score = 29.3 bits (64), Expect(2) = 5e-16
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYD 236
SGVG E SP ESEVWEV +D
Sbjct: 257 SGVGAGETT-HSPCESEVWEVHFD 279
>ref|XP_003573628.1| PREDICTED: uncharacterized protein LOC100834630 [Brachypodium
distachyon]
Length = 343
Score = 75.1 bits (183), Expect(2) = 2e-15
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = -3
Query: 140 DGILAVIEKGMEPIELLAEPCAINSLDIDKQNPSNIICGLEWESV 6
DGILA++E+ P+ELLAEPCAINS DID QNPS+++C LEWES+
Sbjct: 286 DGILAIVEQDERPLELLAEPCAINSFDIDPQNPSDVVCALEWESI 330
Score = 32.3 bits (72), Expect(2) = 2e-15
Identities = 20/45 (44%), Positives = 23/45 (51%)
Frame = -1
Query: 307 SGVGITERGFQSPSESEVWEVQYDXXXXXXXXXXXXXSRTLPVMM 173
SGVG+ QS ESEVWEV +D +R LPVMM
Sbjct: 239 SGVGLDGTA-QSVCESEVWEVLFDNYTQSSDIISSASTRMLPVMM 282