BLASTX nr result

ID: Rheum21_contig00015070 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00015070
         (370 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006467897.1| PREDICTED: F-box protein At1g61340-like [Cit...    62   8e-08
ref|XP_006449212.1| hypothetical protein CICLE_v10016832mg [Citr...    62   8e-08
gb|EXB51823.1| F-box protein SKIP27 [Morus notabilis]                  57   3e-06
emb|CBI23311.3| unnamed protein product [Vitis vinifera]               57   3e-06
ref|XP_004248377.1| PREDICTED: F-box protein SKIP27-like isoform...    55   7e-06

>ref|XP_006467897.1| PREDICTED: F-box protein At1g61340-like [Citrus sinensis]
          Length = 189

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = -1

Query: 196 SDFDFDCKAEMPMKKLCGEGGDAFQCTDKSVLESLPLDVLIRIISGVNHEDLNQLFEVSE 17
           S FD   K+   +K+ C E    F C +KS LE+LP D+LIRI+ GVNHEDL QLF VS 
Sbjct: 48  SSFDSATKSSS-LKRQCSEKMIDFNCDEKSRLEALPQDILIRILCGVNHEDLKQLFHVSR 106

Query: 16  IICQA 2
            I +A
Sbjct: 107 PIREA 111


>ref|XP_006449212.1| hypothetical protein CICLE_v10016832mg [Citrus clementina]
           gi|557551823|gb|ESR62452.1| hypothetical protein
           CICLE_v10016832mg [Citrus clementina]
          Length = 190

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = -1

Query: 196 SDFDFDCKAEMPMKKLCGEGGDAFQCTDKSVLESLPLDVLIRIISGVNHEDLNQLFEVSE 17
           S FD   K+   +K+ C E    F C +KS LE+LP D+LIRI+ GVNHEDL QLF VS 
Sbjct: 48  SSFDSATKSSS-LKRQCSEKMIDFNCDEKSRLEALPQDILIRILCGVNHEDLKQLFHVSR 106

Query: 16  IICQA 2
            I +A
Sbjct: 107 PIREA 111


>gb|EXB51823.1| F-box protein SKIP27 [Morus notabilis]
          Length = 174

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/65 (46%), Positives = 40/65 (61%)
 Frame = -1

Query: 196 SDFDFDCKAEMPMKKLCGEGGDAFQCTDKSVLESLPLDVLIRIISGVNHEDLNQLFEVSE 17
           S+   D   + P KK CG         ++S LE+LP DVL+RI+ GV+HEDLNQL  VS+
Sbjct: 44  SNLSGDSSPKTPTKKRCGGMNTVVMDLERSPLEALPNDVLVRILCGVDHEDLNQLSHVSK 103

Query: 16  IICQA 2
            I +A
Sbjct: 104 SIREA 108


>emb|CBI23311.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = -1

Query: 175 KAEMPMKKLCGEGGDAFQCTDKSVLESLPLDVLIRIISGVNHEDLNQLFEVSEIICQA 2
           K+  P+K+ CGE  +  +  +KS+LE++P D+LIRI+ GV+H+DL QLF VS  I  A
Sbjct: 306 KSRTPLKRRCGEMVE--EKAEKSMLEAMPQDILIRILCGVDHDDLKQLFHVSNTIRDA 361


>ref|XP_004248377.1| PREDICTED: F-box protein SKIP27-like isoform 1 [Solanum
           lycopersicum] gi|460405832|ref|XP_004248378.1|
           PREDICTED: F-box protein SKIP27-like isoform 2 [Solanum
           lycopersicum]
          Length = 177

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 30/62 (48%), Positives = 40/62 (64%)
 Frame = -1

Query: 187 DFDCKAEMPMKKLCGEGGDAFQCTDKSVLESLPLDVLIRIISGVNHEDLNQLFEVSEIIC 8
           D D  +  P KK+C    ++F    KS LE+LP D+LIRI+ GV HEDL +LF VS+ I 
Sbjct: 33  DLDFISTTPTKKICRN--NSFSTCVKSPLEALPQDILIRIVCGVEHEDLKRLFHVSKPIR 90

Query: 7   QA 2
           +A
Sbjct: 91  EA 92


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