BLASTX nr result

ID: Rheum21_contig00015006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00015006
         (218 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525301.1| amino acid binding protein, putative [Ricinu...    57   1e-06
ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264...    55   2e-06

>ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
           gi|223535459|gb|EEF37129.1| amino acid binding protein,
           putative [Ricinus communis]
          Length = 477

 Score = 57.0 bits (136), Expect(2) = 1e-06
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = +1

Query: 100 ILLEMVQALSDLDLIISKSYICSNGGWFMN 189
           ILLEMVQ L+DLDL+ISKSYICS+GGWFM+
Sbjct: 48  ILLEMVQVLTDLDLVISKSYICSDGGWFMD 77



 Score = 20.8 bits (42), Expect(2) = 1e-06
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 36 CFSDVALQYTFLS*VDSANKH 98
          C  + A Q   +  VDSANKH
Sbjct: 26 CIDNEACQDCTVVKVDSANKH 46


>ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
           gi|296085715|emb|CBI29515.3| unnamed protein product
           [Vitis vinifera]
          Length = 468

 Score = 55.5 bits (132), Expect(2) = 2e-06
 Identities = 24/30 (80%), Positives = 29/30 (96%)
 Frame = +1

Query: 100 ILLEMVQALSDLDLIISKSYICSNGGWFMN 189
           ILLEMVQ L+DL+L+ISKSYICS+GGWFM+
Sbjct: 48  ILLEMVQVLTDLELVISKSYICSDGGWFMD 77



 Score = 21.6 bits (44), Expect(2) = 2e-06
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 36 CFSDVALQYTFLS*VDSANKH 98
          C  + A Q   L  VDSANKH
Sbjct: 26 CIDNDACQDCTLVKVDSANKH 46


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