BLASTX nr result
ID: Rheum21_contig00014945
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00014945
(1223 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006413865.1| hypothetical protein EUTSA_v10026002mg [Eutr... 163 2e-37
ref|NP_193777.1| small nuclear ribonucleoprotein associated prot... 163 2e-37
ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arab... 163 2e-37
ref|XP_006280941.1| hypothetical protein CARUB_v10026942mg, part... 162 3e-37
ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a... 162 3e-37
ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated p... 162 3e-37
ref|XP_006284390.1| hypothetical protein CARUB_v10005560mg [Caps... 161 4e-37
ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|5... 161 4e-37
ref|XP_006377906.1| hypothetical protein POPTR_0011s15920g [Popu... 161 6e-37
ref|XP_006377905.1| small nuclear ribonucleoprotein associated p... 161 6e-37
ref|XP_002317685.1| predicted protein [Populus trichocarpa] 161 6e-37
gb|ABK93409.1| unknown [Populus trichocarpa] 161 6e-37
ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a... 161 6e-37
gb|EMJ10638.1| hypothetical protein PRUPE_ppa009615mg [Prunus pe... 160 8e-37
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p... 160 1e-36
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p... 160 1e-36
ref|XP_004298981.1| PREDICTED: small nuclear ribonucleoprotein-a... 159 2e-36
dbj|BAD43836.1| unknown protein [Arabidopsis thaliana] 159 2e-36
gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana] 159 2e-36
ref|NP_199263.1| small nuclear ribonucleoprotein family protein ... 159 3e-36
>ref|XP_006413865.1| hypothetical protein EUTSA_v10026002mg [Eutrema salsugineum]
gi|557115035|gb|ESQ55318.1| hypothetical protein
EUTSA_v10026002mg [Eutrema salsugineum]
Length = 263
Score = 163 bits (412), Expect = 2e-37
Identities = 92/151 (60%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E G+PT P
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
L+QAQPGLS GMMQPQISRPP
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRPP 151
>ref|NP_193777.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|30685110|ref|NP_849414.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|79325195|ref|NP_001031682.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|238480869|ref|NP_001154258.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|5262167|emb|CAB45810.1| putative snRNP
protein [Arabidopsis thaliana] gi|7268840|emb|CAB79044.1|
putative snRNP protein [Arabidopsis thaliana]
gi|28393634|gb|AAO42236.1| putative snRNP protein
[Arabidopsis thaliana] gi|28827492|gb|AAO50590.1|
putative snRNP protein [Arabidopsis thaliana]
gi|222423490|dbj|BAH19715.1| AT4G20440 [Arabidopsis
thaliana] gi|332658930|gb|AEE84330.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|332658931|gb|AEE84331.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|332658932|gb|AEE84332.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana] gi|332658933|gb|AEE84333.1| small nuclear
ribonucleoprotein associated protein B [Arabidopsis
thaliana]
Length = 257
Score = 163 bits (412), Expect = 2e-37
Identities = 92/151 (60%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E G+PT P
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
L+QAQPGLS GMMQPQISRPP
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRPP 151
>ref|XP_002867880.1| hypothetical protein ARALYDRAFT_492815 [Arabidopsis lyrata subsp.
lyrata] gi|297313716|gb|EFH44139.1| hypothetical protein
ARALYDRAFT_492815 [Arabidopsis lyrata subsp. lyrata]
Length = 258
Score = 163 bits (412), Expect = 2e-37
Identities = 92/151 (60%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E G+PT P
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
L+QAQPGLS GMMQPQISRPP
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRPP 151
>ref|XP_006280941.1| hypothetical protein CARUB_v10026942mg, partial [Capsella rubella]
gi|482549645|gb|EOA13839.1| hypothetical protein
CARUB_v10026942mg, partial [Capsella rubella]
Length = 275
Score = 162 bits (410), Expect = 3e-37
Identities = 93/154 (60%), Positives = 99/154 (64%), Gaps = 2/154 (1%)
Frame = -2
Query: 1111 AKMLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAK-GK 935
AKM +SKSSKMLQFINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAK GK
Sbjct: 22 AKMSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGGK 81
Query: 934 KPTXXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIP 758
K EV+SMTVEGPPPP+E G+P
Sbjct: 82 KTNEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSATAVAGPGIGRAAGRGVP 141
Query: 757 TAPLIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
T PL+QAQPGLS GMMQPQISRPP
Sbjct: 142 TGPLVQAQPGLSGPVRGIGGPAPGMMQPQISRPP 175
>ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
[Cucumis sativus] gi|449490639|ref|XP_004158663.1|
PREDICTED: small nuclear ribonucleoprotein-associated
protein B'-like [Cucumis sativus]
Length = 284
Score = 162 bits (409), Expect = 3e-37
Identities = 92/152 (60%), Positives = 98/152 (64%), Gaps = 1/152 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPP +E GIPTAP
Sbjct: 61 EERDERRTLGLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
L+QAQPGL+ GMMQPQISRPPV
Sbjct: 121 LVQAQPGLAGPVRGVGGPAPGMMQPQISRPPV 152
>ref|XP_003617477.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
truncatula] gi|355518812|gb|AET00436.1| Small nuclear
ribonucleoprotein-associated protein B [Medicago
truncatula]
Length = 394
Score = 162 bits (409), Expect = 3e-37
Identities = 94/155 (60%), Positives = 100/155 (64%), Gaps = 2/155 (1%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK T
Sbjct: 1 MSLSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTT 60
Query: 925 -XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTA 752
EV+SM VEGPPPP+E GIP A
Sbjct: 61 DGDREDRRTLGLVLLRGEEVISMAVEGPPPPEESRSKAVNAAAMAGPGIGRAAGRGIPPA 120
Query: 751 PLIQAQPGLSXXXXXXXXXXXGMMQPQISRPPVSY 647
P+IQAQPGL+ GMMQPQISRPPVSY
Sbjct: 121 PVIQAQPGLAGPVRGVGGPAPGMMQPQISRPPVSY 155
>ref|XP_006284390.1| hypothetical protein CARUB_v10005560mg [Capsella rubella]
gi|565445302|ref|XP_006284391.1| hypothetical protein
CARUB_v10005560mg [Capsella rubella]
gi|482553095|gb|EOA17288.1| hypothetical protein
CARUB_v10005560mg [Capsella rubella]
gi|482553096|gb|EOA17289.1| hypothetical protein
CARUB_v10005560mg [Capsella rubella]
Length = 254
Score = 161 bits (408), Expect = 4e-37
Identities = 91/151 (60%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQFIN+RMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQFINFRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKIN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E G+PT P
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAGSAAAVAGPGIGRAAGRGVPTGP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
L+QAQPGLS GMMQPQISRPP
Sbjct: 121 LVQAQPGLSGPVRGVGGPAPGMMQPQISRPP 151
>ref|XP_002332199.1| predicted protein [Populus trichocarpa]
gi|566154475|ref|XP_006370475.1| hypothetical protein
POPTR_0001s43060g [Populus trichocarpa]
gi|566154477|ref|XP_006370476.1| hypothetical protein
POPTR_0001s43060g [Populus trichocarpa]
gi|550349668|gb|ERP67044.1| hypothetical protein
POPTR_0001s43060g [Populus trichocarpa]
gi|550349669|gb|ERP67045.1| hypothetical protein
POPTR_0001s43060g [Populus trichocarpa]
Length = 289
Score = 161 bits (408), Expect = 4e-37
Identities = 92/152 (60%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
LIQAQPGL+ GMMQPQ RPPV
Sbjct: 121 LIQAQPGLAGPVRGVGGPSPGMMQPQFMRPPV 152
>ref|XP_006377906.1| hypothetical protein POPTR_0011s15920g [Populus trichocarpa]
gi|566195739|ref|XP_006377907.1| hypothetical protein
POPTR_0011s15920g [Populus trichocarpa]
gi|550328500|gb|ERP55703.1| hypothetical protein
POPTR_0011s15920g [Populus trichocarpa]
gi|550328501|gb|ERP55704.1| hypothetical protein
POPTR_0011s15920g [Populus trichocarpa]
Length = 286
Score = 161 bits (407), Expect = 6e-37
Identities = 91/153 (59%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPVS 650
L+QAQPGL+ GMMQPQ+SRP +S
Sbjct: 121 LVQAQPGLAGPVRGVGGPSPGMMQPQLSRPQLS 153
>ref|XP_006377905.1| small nuclear ribonucleoprotein associated protein B [Populus
trichocarpa] gi|550328499|gb|ERP55702.1| small nuclear
ribonucleoprotein associated protein B [Populus
trichocarpa]
Length = 250
Score = 161 bits (407), Expect = 6e-37
Identities = 91/153 (59%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPVS 650
L+QAQPGL+ GMMQPQ+SRP +S
Sbjct: 121 LVQAQPGLAGPVRGVGGPSPGMMQPQLSRPQLS 153
>ref|XP_002317685.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 161 bits (407), Expect = 6e-37
Identities = 91/153 (59%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPVS 650
L+QAQPGL+ GMMQPQ+SRP +S
Sbjct: 121 LVQAQPGLAGPVRGVGGPSPGMMQPQLSRPQLS 153
>gb|ABK93409.1| unknown [Populus trichocarpa]
Length = 286
Score = 161 bits (407), Expect = 6e-37
Identities = 91/153 (59%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAVAGPGLGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPVS 650
L+QAQPGL+ GMMQPQ+SRP +S
Sbjct: 121 LVQAQPGLAGPVRGVGGPSPGMMQPQLSRPQLS 153
>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
[Vitis vinifera] gi|147774905|emb|CAN61706.1|
hypothetical protein VITISV_001610 [Vitis vinifera]
Length = 276
Score = 161 bits (407), Expect = 6e-37
Identities = 94/152 (61%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK-N 59
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPPP+E GIPTAP
Sbjct: 60 EEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAP 119
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
LIQAQPGL+ GMMQPQISRPPV
Sbjct: 120 LIQAQPGLAGPVRGVGGPAPGMMQPQISRPPV 151
>gb|EMJ10638.1| hypothetical protein PRUPE_ppa009615mg [Prunus persica]
Length = 285
Score = 160 bits (406), Expect = 8e-37
Identities = 93/152 (61%), Positives = 96/152 (63%), Gaps = 1/152 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP KGKK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPLKGKKSN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPP +E GIPTAP
Sbjct: 61 EERDDRRTLGLVLLRGEEVISMTVEGPPPQEESRAKAASAAALAGPGLGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
L QAQPGLS GMMQPQISRPPV
Sbjct: 121 LAQAQPGLSGPVRGVGGPAPGMMQPQISRPPV 152
>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
communis] gi|223530625|gb|EEF32501.1| small nuclear
ribonucleoprotein-associated protein, putative [Ricinus
communis]
Length = 275
Score = 160 bits (405), Expect = 1e-36
Identities = 93/152 (61%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPP +E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
LIQAQPGL+ GMMQPQISRPPV
Sbjct: 121 LIQAQPGLAGPVRGVGGPAPGMMQPQISRPPV 152
>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
communis] gi|223530623|gb|EEF32499.1| small nuclear
ribonucleoprotein-associated protein, putative [Ricinus
communis]
Length = 275
Score = 160 bits (405), Expect = 1e-36
Identities = 93/152 (61%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQ INYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKK
Sbjct: 1 MSMSKSSKMLQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTAP 749
EV+SMTVEGPPP +E GIPTAP
Sbjct: 61 EEREDRRTLGLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAP 120
Query: 748 LIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
LIQAQPGL+ GMMQPQISRPPV
Sbjct: 121 LIQAQPGLAGPVRGVGGPAPGMMQPQISRPPV 152
>ref|XP_004298981.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
isoform 1 [Fragaria vesca subsp. vesca]
gi|470125997|ref|XP_004298982.1| PREDICTED: small nuclear
ribonucleoprotein-associated protein B'-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 263
Score = 159 bits (403), Expect = 2e-36
Identities = 90/153 (58%), Positives = 95/153 (62%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKPT 926
M +SKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPP+KGKK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPSKGKKNN 60
Query: 925 XXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDEXXXXXXXXXXXXXXXXXXXXXGIPTAPL 746
EVVSMTVEGPPP +E APL
Sbjct: 61 EEREDRRTLGMVLLRGEEVVSMTVEGPPPQEESRAKASSAAAMAGPGIGRGAGRGVVAPL 120
Query: 745 IQAQPGLSXXXXXXXXXXXGMMQPQISRPPVSY 647
QAQPGLS GMMQPQISRPP++Y
Sbjct: 121 AQAQPGLSGPVRGVGGPAPGMMQPQISRPPMNY 153
>dbj|BAD43836.1| unknown protein [Arabidopsis thaliana]
Length = 254
Score = 159 bits (402), Expect = 2e-36
Identities = 91/153 (59%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP 929
M +SKSSKMLQFINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKG KK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60
Query: 928 TXXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTA 752
EV+SMTVEGPPPP+E G+PT
Sbjct: 61 NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120
Query: 751 PLIQAQPGLSXXXXXXXXXXXGMMQPQISRPPV 653
PL+QAQPGLS GMMQPQISRPP+
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQISRPPL 153
>gb|AAM61039.1| putative snRNP protein [Arabidopsis thaliana]
Length = 254
Score = 159 bits (402), Expect = 2e-36
Identities = 91/152 (59%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP 929
M +SKSSKMLQFINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKG KK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60
Query: 928 TXXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTA 752
+ EV+SMTVEGPPPP+E G+PT
Sbjct: 61 SEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120
Query: 751 PLIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
PL+QAQPGLS GMMQPQISRPP
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQISRPP 152
>ref|NP_199263.1| small nuclear ribonucleoprotein family protein [Arabidopsis thaliana]
gi|79329893|ref|NP_001032011.1| small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
gi|9758703|dbj|BAB09157.1| unnamed protein product
[Arabidopsis thaliana] gi|14596137|gb|AAK68796.1| Unknown
protein [Arabidopsis thaliana] gi|18377438|gb|AAL66885.1|
unknown protein [Arabidopsis thaliana]
gi|51971895|dbj|BAD44612.1| unknown protein [Arabidopsis
thaliana] gi|62320496|dbj|BAD95039.1| hypothetical
protein [Arabidopsis thaliana]
gi|332007733|gb|AED95116.1| small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
gi|332007734|gb|AED95117.1| small nuclear
ribonucleoprotein family protein [Arabidopsis thaliana]
Length = 254
Score = 159 bits (401), Expect = 3e-36
Identities = 91/152 (59%), Positives = 97/152 (63%), Gaps = 2/152 (1%)
Frame = -2
Query: 1105 MLISKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKP 929
M +SKSSKMLQFINYRMRVTIQDGRQL+GKFMAFDRHMNLVLGDCEEFRKLPPAKG KK
Sbjct: 1 MSMSKSSKMLQFINYRMRVTIQDGRQLIGKFMAFDRHMNLVLGDCEEFRKLPPAKGNKKT 60
Query: 928 TXXXXXXXXXXXXXXXXXEVVSMTVEGPPPPDE-XXXXXXXXXXXXXXXXXXXXXGIPTA 752
EV+SMTVEGPPPP+E G+PT
Sbjct: 61 NEEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGSVTAVAGPGIGRAAGRGVPTG 120
Query: 751 PLIQAQPGLSXXXXXXXXXXXGMMQPQISRPP 656
PL+QAQPGLS GMMQPQISRPP
Sbjct: 121 PLVQAQPGLSGPVRGIGGPAPGMMQPQISRPP 152