BLASTX nr result
ID: Rheum21_contig00014857
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00014857
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI19889.3| unnamed protein product [Vitis vinifera] 65 7e-09
ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 65 7e-09
gb|EOY15058.1| DEA(D/H)-box RNA helicase family protein isoform ... 64 3e-08
gb|EOY15057.1| DEA(D/H)-box RNA helicase family protein isoform ... 64 3e-08
gb|EOY15056.1| DEA(D/H)-box RNA helicase family protein isoform ... 64 3e-08
ref|XP_002306942.1| hypothetical protein POPTR_0005s26280g [Popu... 62 8e-08
ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 61 2e-07
ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 61 2e-07
ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putativ... 60 3e-07
ref|XP_006473677.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 4e-07
ref|XP_006473676.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 60 4e-07
gb|EPS70742.1| hypothetical protein M569_04012, partial [Genlise... 59 7e-07
ref|XP_006435200.1| hypothetical protein CICLE_v10000409mg [Citr... 59 9e-07
ref|XP_006435199.1| hypothetical protein CICLE_v10000409mg [Citr... 59 9e-07
ref|XP_006435198.1| hypothetical protein CICLE_v10000409mg [Citr... 59 9e-07
ref|XP_006342065.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 58 1e-06
ref|XP_004238369.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 58 1e-06
ref|XP_004292941.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 57 2e-06
ref|XP_004500137.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 57 3e-06
gb|EMJ26429.1| hypothetical protein PRUPE_ppa001893mg [Prunus pe... 57 3e-06
>emb|CBI19889.3| unnamed protein product [Vitis vinifera]
Length = 875
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKLQSPWDFSTFSRSVAEEHSIRN 254
MDSSFVFE PSDEEP+ E + QSPWDF+++S +VAEEH+ R+
Sbjct: 1 MDSSFVFEVPSDEEPEYEPDEDEEEEEGEGEGAAQTAS-QSPWDFASYSETVAEEHARRS 59
Query: 255 TTSIDEKIYK 284
TTS+D KI K
Sbjct: 60 TTSVDFKISK 69
>ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
vinifera]
Length = 732
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/70 (50%), Positives = 44/70 (62%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKLQSPWDFSTFSRSVAEEHSIRN 254
MDSSFVFE PSDEEP+ E + QSPWDF+++S +VAEEH+ R+
Sbjct: 1 MDSSFVFEVPSDEEPEYEPDEDEEEEEGEGEGAAQTAS-QSPWDFASYSETVAEEHARRS 59
Query: 255 TTSIDEKIYK 284
TTS+D KI K
Sbjct: 60 TTSVDFKISK 69
>gb|EOY15058.1| DEA(D/H)-box RNA helicase family protein isoform 3 [Theobroma
cacao]
Length = 644
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAE--------KLQSPWDFSTFSRSV 230
M SF+FE PSDEEP+ E AE K QSPWDF+++S SV
Sbjct: 1 MAPSFIFEAPSDEEPEFEESEEEDNEEAEEEEGAEAEEKPSKPKRKSQSPWDFASYSESV 60
Query: 231 AEEHSIRNTTSIDEKIYK 284
AEEH+ R TTS+D KI K
Sbjct: 61 AEEHARRGTTSVDFKISK 78
>gb|EOY15057.1| DEA(D/H)-box RNA helicase family protein isoform 2 [Theobroma
cacao]
Length = 768
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAE--------KLQSPWDFSTFSRSV 230
M SF+FE PSDEEP+ E AE K QSPWDF+++S SV
Sbjct: 1 MAPSFIFEAPSDEEPEFEESEEEDNEEAEEEEGAEAEEKPSKPKRKSQSPWDFASYSESV 60
Query: 231 AEEHSIRNTTSIDEKIYK 284
AEEH+ R TTS+D KI K
Sbjct: 61 AEEHARRGTTSVDFKISK 78
>gb|EOY15056.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma
cacao]
Length = 738
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/78 (46%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAE--------KLQSPWDFSTFSRSV 230
M SF+FE PSDEEP+ E AE K QSPWDF+++S SV
Sbjct: 1 MAPSFIFEAPSDEEPEFEESEEEDNEEAEEEEGAEAEEKPSKPKRKSQSPWDFASYSESV 60
Query: 231 AEEHSIRNTTSIDEKIYK 284
AEEH+ R TTS+D KI K
Sbjct: 61 AEEHARRGTTSVDFKISK 78
>ref|XP_002306942.1| hypothetical protein POPTR_0005s26280g [Populus trichocarpa]
gi|222856391|gb|EEE93938.1| hypothetical protein
POPTR_0005s26280g [Populus trichocarpa]
Length = 744
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/74 (48%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDL----ELQXXXXXXXXXXXIE--TRAEKLQSPWDFSTFSRSVAE 236
M SFVFE PSDEE +L EL+ E ++ + QSPWDF+++S SVAE
Sbjct: 1 MAPSFVFEPPSDEEVELSEAEELEDEEEEAEGEGEEEKPSKRRQKQSPWDFASYSESVAE 60
Query: 237 EHSIRNTTSIDEKI 278
EH+ R+TTSID+KI
Sbjct: 61 EHARRSTTSIDDKI 74
>ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKL-----QSPWDFSTFSRSVAEE 239
M SFVFE PSDEE DL + E E L +SPWDF+++S SVA+E
Sbjct: 1 MALSFVFEPPSDEEIDLSEEEEQQEQADQGGEEEEDEPLSRHRTESPWDFASYSESVADE 60
Query: 240 HSIRNTTSIDEKIYK 284
H+ R+TTS+D KI K
Sbjct: 61 HARRSTTSVDFKISK 75
>ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 60.8 bits (146), Expect = 2e-07
Identities = 35/75 (46%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKL-----QSPWDFSTFSRSVAEE 239
M SFVFE PSDEE DL + E E L +SPWDF+++S SVA+E
Sbjct: 1 MALSFVFEPPSDEEIDLSEEEQQQEQADQGGEEEEDEPLSRHRTESPWDFASYSESVADE 60
Query: 240 HSIRNTTSIDEKIYK 284
H+ R+TTS+D KI K
Sbjct: 61 HARRSTTSVDFKISK 75
>ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 783
Score = 60.1 bits (144), Expect = 3e-07
Identities = 36/87 (41%), Positives = 44/87 (50%), Gaps = 17/87 (19%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAE-----------------KLQSPW 203
M + FVFE PSDEEP L + E E K QSPW
Sbjct: 1 MATGFVFEPPSDEEPGLSHEEEEEEEDEQEEREEEEEDGDEEEEKEAEKKASNRKSQSPW 60
Query: 204 DFSTFSRSVAEEHSIRNTTSIDEKIYK 284
DF+++S SVAEEH+ R+TTS+D KI K
Sbjct: 61 DFASYSESVAEEHARRSTTSVDYKISK 87
>ref|XP_006473677.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform X2
[Citrus sinensis]
Length = 678
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 75 MDSSFVFEQPSDEE---PDLELQXXXXXXXXXXXIETRAEKLQSPWDFSTFSRSVAEEHS 245
MDS F+FE PSDEE P E + RA+ QSPWDF+ +S SV++EH
Sbjct: 1 MDSGFIFEPPSDEEIEEPQSEYEEDQGEEVDVEKPSKRAK--QSPWDFAAYSESVSDEHF 58
Query: 246 IRNTTSIDEKIYK 284
R TTS+D KI K
Sbjct: 59 RRRTTSVDFKITK 71
>ref|XP_006473676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like isoform X1
[Citrus sinensis]
Length = 729
Score = 59.7 bits (143), Expect = 4e-07
Identities = 34/73 (46%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Frame = +3
Query: 75 MDSSFVFEQPSDEE---PDLELQXXXXXXXXXXXIETRAEKLQSPWDFSTFSRSVAEEHS 245
MDS F+FE PSDEE P E + RA+ QSPWDF+ +S SV++EH
Sbjct: 1 MDSGFIFEPPSDEEIEEPQSEYEEDQGEEVDVEKPSKRAK--QSPWDFAAYSESVSDEHF 58
Query: 246 IRNTTSIDEKIYK 284
R TTS+D KI K
Sbjct: 59 RRRTTSVDFKITK 71
>gb|EPS70742.1| hypothetical protein M569_04012, partial [Genlisea aurea]
Length = 717
Score = 58.9 bits (141), Expect = 7e-07
Identities = 34/74 (45%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 81 SSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAE------KLQSPWDFSTFSRSVAEEH 242
S F FE PSDEE + E + E+ + K QSPWDFS++S SVA EH
Sbjct: 1 SRFFFEPPSDEEVEQETEIEGDRENEEDAEESDMKEEKTPNKSQSPWDFSSYSESVAVEH 60
Query: 243 SIRNTTSIDEKIYK 284
S R+TTS+D KI K
Sbjct: 61 SKRSTTSVDHKIAK 74
>ref|XP_006435200.1| hypothetical protein CICLE_v10000409mg [Citrus clementina]
gi|557537322|gb|ESR48440.1| hypothetical protein
CICLE_v10000409mg [Citrus clementina]
Length = 729
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKL-QSPWDFSTFSRSVAEEHSIR 251
MDS F+FE PSDEE + +E +++ QSPWDF+ +S SV++EH R
Sbjct: 1 MDSGFIFEPPSDEEIEELQSEYEEDQGEEVDVEKPSKRAKQSPWDFAAYSESVSDEHFRR 60
Query: 252 NTTSIDEKIYK 284
TTS+D KI K
Sbjct: 61 RTTSVDFKITK 71
>ref|XP_006435199.1| hypothetical protein CICLE_v10000409mg [Citrus clementina]
gi|557537321|gb|ESR48439.1| hypothetical protein
CICLE_v10000409mg [Citrus clementina]
Length = 678
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKL-QSPWDFSTFSRSVAEEHSIR 251
MDS F+FE PSDEE + +E +++ QSPWDF+ +S SV++EH R
Sbjct: 1 MDSGFIFEPPSDEEIEELQSEYEEDQGEEVDVEKPSKRAKQSPWDFAAYSESVSDEHFRR 60
Query: 252 NTTSIDEKIYK 284
TTS+D KI K
Sbjct: 61 RTTSVDFKITK 71
>ref|XP_006435198.1| hypothetical protein CICLE_v10000409mg [Citrus clementina]
gi|557537320|gb|ESR48438.1| hypothetical protein
CICLE_v10000409mg [Citrus clementina]
Length = 643
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRAEKL-QSPWDFSTFSRSVAEEHSIR 251
MDS F+FE PSDEE + +E +++ QSPWDF+ +S SV++EH R
Sbjct: 1 MDSGFIFEPPSDEEIEELQSEYEEDQGEEVDVEKPSKRAKQSPWDFAAYSESVSDEHFRR 60
Query: 252 NTTSIDEKIYK 284
TTS+D KI K
Sbjct: 61 RTTSVDFKITK 71
>ref|XP_006342065.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Solanum
tuberosum]
Length = 745
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRA--------EKLQSPWDFSTFSRSV 230
M + F FEQPSDEE + E + +K QSPWDFS++S SV
Sbjct: 1 MATDFSFEQPSDEEVEYEENDDSEEEEHEVDEDNEDADPKPRTNKKPQSPWDFSSYSESV 60
Query: 231 AEEHSIRNTTSIDEKIYK 284
A+EHS R TTSID KI K
Sbjct: 61 ADEHSHRRTTSIDFKISK 78
>ref|XP_004238369.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Solanum
lycopersicum]
Length = 744
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Frame = +3
Query: 75 MDSSFVFEQPSDEEPDLELQXXXXXXXXXXXIETRA--------EKLQSPWDFSTFSRSV 230
M + F FEQPSDEE + E + +K QSPWDFS++S SV
Sbjct: 1 MATDFSFEQPSDEEVEYEENDDSEEEEHEVDEDNEDADPKPRTNKKPQSPWDFSSYSESV 60
Query: 231 AEEHSIRNTTSIDEKIYK 284
A+EHS R TTSID KI K
Sbjct: 61 ADEHSHRRTTSIDFKISK 78
>ref|XP_004292941.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Fragaria
vesca subsp. vesca]
Length = 749
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +3
Query: 75 MDSSFVFEQPSDEE---------PDLELQXXXXXXXXXXXIETRAEKLQSPWDFSTFSRS 227
M SFVFE PSDEE D E + QSPWDF+ +S +
Sbjct: 1 MAPSFVFEPPSDEEYSEPEEQDYSDAEDEDEEEQEEASLKPSRPPRTSQSPWDFAAYSET 60
Query: 228 VAEEHSIRNTTSIDEKIYK 284
VAEEH+ R+TTS+DEKI K
Sbjct: 61 VAEEHARRSTTSVDEKISK 79
>ref|XP_004500137.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cicer
arietinum]
Length = 768
Score = 56.6 bits (135), Expect = 3e-06
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 26/95 (27%)
Frame = +3
Query: 75 MDSSFVFEQPSDEE--------------------PDLELQXXXXXXXXXXXIETRAE--- 185
M SF+F+ PSDEE P+LE + E E
Sbjct: 1 MSPSFLFDPPSDEEIEHSEIEDEEENNEEEEESEPELESEEEGEEGEEGEEGEEPKEPKV 60
Query: 186 ---KLQSPWDFSTFSRSVAEEHSIRNTTSIDEKIY 281
K QSPWDF+ +S SVAEEH+ R+TTS+D+KIY
Sbjct: 61 SKKKTQSPWDFTKYSESVAEEHARRSTTSVDDKIY 95
>gb|EMJ26429.1| hypothetical protein PRUPE_ppa001893mg [Prunus persica]
Length = 745
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/78 (43%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Frame = +3
Query: 75 MDSSFVFEQPSDEE--------PDLELQXXXXXXXXXXXIETRAEKLQSPWDFSTFSRSV 230
M SFVFE PSDEE E Q +R QSPWDF+ +S +V
Sbjct: 1 MAPSFVFEPPSDEEYSDAEEEEQQEEQQEEEEDEQQEGVKPSRPRHSQSPWDFAAYSETV 60
Query: 231 AEEHSIRNTTSIDEKIYK 284
AEEH+ R+TTS+D KI K
Sbjct: 61 AEEHARRSTTSVDFKISK 78