BLASTX nr result
ID: Rheum21_contig00013362
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00013362
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 115 8e-24
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 94 1e-17
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 94 1e-17
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 94 1e-17
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 87 2e-15
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 87 3e-15
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 86 4e-15
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 85 1e-14
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 83 4e-14
gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [... 79 6e-13
ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296... 78 1e-12
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 78 1e-12
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t... 77 2e-12
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 77 2e-12
gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [... 76 5e-12
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 75 9e-12
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 75 1e-11
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana] 75 1e-11
ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 ... 74 2e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 74 2e-11
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 115 bits (287), Expect = 8e-24
Identities = 58/102 (56%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G PIIN RV TFA +++ T +QL KWKANSLSQAGRT LI++NLAS+ +F MQSF LP
Sbjct: 768 GCPIINSRVTKETFAGVISKTVQQLPKWKANSLSQAGRTVLIQSNLASKASFQMQSFTLP 827
Query: 181 TNTHNELDKLNRSFFWNKDNNYKP--LIGWDKICKPTQQGGL 300
LD R+FFWNKD K IGW+KIC+P GG+
Sbjct: 828 KKVLTTLDTTYRNFFWNKDPAAKSANFIGWNKICQPKSVGGV 869
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ RV+ NTF ++ + +L+ WKA+SL+ AGR L++A+LA+ P + MQ LP
Sbjct: 1288 GIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALP 1347
Query: 181 TNTHNELDKLNRSFFWNKDNNYKPL--IGWDKICKPTQQGGL 300
+T NE+DK R+F W D N + L + W +ICKP +GGL
Sbjct: 1348 VSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGL 1389
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ RV+ NTF ++ + +L+ WKA+SL+ AGR L++A+LA+ P + MQ LP
Sbjct: 756 GIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALP 815
Query: 181 TNTHNELDKLNRSFFWNKDNNYKPL--IGWDKICKPTQQGGL 300
+T NE+DK R+F W D N + L + W +ICKP +GGL
Sbjct: 816 VSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGL 857
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/102 (43%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ RV+ NTF ++ + +L+ WKA+SL+ AGR L++A+LA+ P + MQ LP
Sbjct: 756 GIPMLKERVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALP 815
Query: 181 TNTHNELDKLNRSFFWNKDNNYKPL--IGWDKICKPTQQGGL 300
+T NE+DK R+F W D N + L + W +ICKP +GGL
Sbjct: 816 VSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICKPRNEGGL 857
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 87.0 bits (214), Expect = 2e-15
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ R+N +TF D+L +L WK LS AGR TL KA L+S P M + LP
Sbjct: 277 GMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALP 336
Query: 181 TNTHNELDKLNRSFFWNKD--NNYKPLIGWDKICKPTQQGGL 300
+T + LDK++RSF W + LI W ++CKP +GGL
Sbjct: 337 KSTLDGLDKVSRSFLWGSSVTQRKQHLISWKRVCKPRSEGGL 378
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ R+N +TF ++L +L+ WK+ SLS AGR TL KA L S P M S +LP
Sbjct: 550 GMPVLQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLP 609
Query: 181 TNTHNELDKLNRSFFWNK--DNNYKPLIGWDKICKPTQQGGL 300
+ +LDK++R+F W + + L+ W K+C+P GGL
Sbjct: 610 ASLLEQLDKVSRNFLWGSTVEKRKQHLLSWKKVCRPKAAGGL 651
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G PI+ R+N TF ++L +L WK SLS AGR TL KA L+S P +M + +LP
Sbjct: 615 GMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLP 674
Query: 181 TNTHNELDKLNRSFFWNK--DNNYKPLIGWDKICKPTQQGGL 300
+T + LD+ +R+F W + + L+ W KICKP +GG+
Sbjct: 675 VSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGI 716
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P+I+ RVN +T+ + Q +L+ WK+ LS AGR TLI++ ++ PN+ MQ+ P
Sbjct: 15 GMPLIHSRVNKHTYDGIFDQVQSRLSSWKSKVLSMAGRLTLIQSVSSAIPNYAMQTAKFP 74
Query: 181 TNTHNELDKLNRSFFWNKDNNYKP--LIGWDKICKPTQQGGL 300
+ LDKLNR+F W K L+ WD +C+P Q G +
Sbjct: 75 VSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQPKQLGDI 116
>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
Length = 620
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
Frame = +1
Query: 7 PIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLPTN 186
P++ R+N +TF ++L +++ W+ +LS AGR TL KA L+S P M + +LP +
Sbjct: 2 PVLQKRINKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQS 61
Query: 187 THNELDKLNRSFFWNK--DNNYKPLIGWDKICKPTQQGGL 300
N LD+L+R+F W + + L+ W K+C P ++GGL
Sbjct: 62 ILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGL 101
>gb|EMJ28309.1| hypothetical protein PRUPE_ppa026753mg, partial [Prunus persica]
Length = 172
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ GRV T+ +L Q +L+ WK+ LS AGR TLI++ +S P + MQ LP
Sbjct: 40 GVPLVQGRVTKATYKGVLVKVQAKLSAWKSQLLSMAGRITLIQSVASSIPQYTMQMAKLP 99
Query: 181 TNTHNELDKLNRSFFW-NKDNNYKPLIG-WDKICKPTQQGGL 300
+LDK ++SF W + + ++K +G WD +C P GGL
Sbjct: 100 QALCEDLDKSSKSFLWESSETHHKTHLGKWDTVCLPKPLGGL 141
>ref|XP_004305437.1| PREDICTED: uncharacterized protein LOC101296313 [Fragaria vesca
subsp. vesca]
Length = 449
Score = 78.2 bits (191), Expect = 1e-12
Identities = 42/102 (41%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P+I RVN T+A L QK+L WK+ LS GR TL+++ ++ P + MQ+
Sbjct: 321 GMPLIYDRVNKCTYAGLFDKVQKRLFSWKSKVLSFVGRLTLVQSVTSAIPMYAMQTAKFH 380
Query: 181 TNTHNELDKLNRSFFWNKDNNYK--PLIGWDKICKPTQQGGL 300
N ++LDKLNR F + N K L+ WD IC+P GGL
Sbjct: 381 VNLCDKLDKLNRDFILSDVENKKRVHLVNWDTICQPKYLGGL 422
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 77.8 bits (190), Expect = 1e-12
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G I+ ++ + LL + + W+A L+ AGR TLIK+ ++S P + MQS +LP
Sbjct: 755 GCNILPNKLRRGDYDGLLEKVKSAINGWQAKYLNMAGRCTLIKSVVSSFPVYGMQSSLLP 814
Query: 181 TNTHNELDKLNRSFFWNK--DNNYKPLIGWDKICKPTQQGGL 300
+ NE++K R F WNK ++Y + WD+IC PT +GGL
Sbjct: 815 VSVMNEIEKDCRKFLWNKMDKSHYLARMSWDRICSPTGKGGL 856
>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
protein [Theobroma cacao]
Length = 620
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P+++GR ++ + L+ + +L WKA+SLS GR TL+++ L S P + MQ+ +P
Sbjct: 329 GVPLLHGRKTAHIYKSLIDKVRSRLCAWKASSLSSTGRLTLVQSVLTSIPLYTMQTISIP 388
Query: 181 TNTHNELDKLNRSFFWNKDNNYKP--LIGWDKICKPTQQGG 297
+++ L R+F W+ D K L+ W +CKP QGG
Sbjct: 389 LEICKKIELLCRNFLWHGDGQSKKVHLLRWSTLCKPKAQGG 429
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/102 (40%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G PI+ R+N +TF ++L +L WK SLS AGR TL K+ L+ P M + LP
Sbjct: 429 GMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLP 488
Query: 181 TNTHNELDKLNRSFFWNKDNNYKP--LIGWDKICKPTQQGGL 300
+T LDKL R F K L+ WD++C P +GGL
Sbjct: 489 QSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPKSEGGL 530
>gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
Length = 887
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P + GR S F+ L K+L WK LS AG+ L+KA + + P + M F+LP
Sbjct: 333 GMPTLVGRRRSACFSYLKERIMKRLHGWKGKLLSGAGKEILLKAVVQAIPLYSMSYFLLP 392
Query: 181 TNTHNELDKLNRSFFWNKDNNYKPL--IGWDKICKPTQQGGL 300
+++L+KL F+WN N + + I W+K+CKP +GG+
Sbjct: 393 RGFYDDLNKLMAGFWWNNSNGDRKIHWISWEKLCKPKDEGGM 434
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P INGR + + L+ +L WK +LS AGR TLI++ +S P + MQS LP
Sbjct: 758 GVPTINGRSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLP 817
Query: 181 TNTHNELDKLNRSFFWNKDNNYK--PLIGWDKICKPTQQGGL 300
+T +++D+ +RSF W + + L+ W+ I K ++GGL
Sbjct: 818 RSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISKSKKEGGL 859
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P+++ RV+ T+ +L T ++L W A+ LS AGR TL ++ L + P + MQ+ LP
Sbjct: 182 GMPLLHSRVSQQTYQGILDKTDQKLLGWAASQLSLAGRITLTQSVLQAVPIYAMQTTNLP 241
Query: 181 TNTHNELDKLNRSFFWNKDNNYK--PLIGWDKICKPTQQGGL 300
+ +LD++ R F W+ ++ + L+ W IC+P GGL
Sbjct: 242 GSIKTKLDQICRRFLWSGNDELRKMSLVSWHNICQPKMAGGL 283
>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
Length = 382
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ R+ S + LL +K++ W A LS AGR +LI + L S NF + +F LP
Sbjct: 190 GLPLVTKRLTSTDYRSLLEQIKKKIGSWTARYLSYAGRLSLITSVLWSTCNFWLSAFRLP 249
Query: 181 TNTHNELDKLNRSFFWNKD--NNYKPLIGWDKICKPTQQGGL 300
E++KL +F W+ N +K + W +CKP Q+GGL
Sbjct: 250 RGCIKEIEKLCSAFLWSGPDLNPHKAKLSWVDVCKPKQEGGL 291
>ref|XP_002489165.1| hypothetical protein SORBIDRAFT_0015s007030 [Sorghum bicolor]
gi|241947177|gb|EES20322.1| hypothetical protein
SORBIDRAFT_0015s007030 [Sorghum bicolor]
Length = 933
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P+ R++ + ++ ++L WK NSLS GR TLI + L++ P + + ++LP
Sbjct: 763 GVPVSPSRIHVRDWLPIVEKAYRKLDVWKGNSLSIPGRKTLIDSTLSNAPLYQISIYLLP 822
Query: 181 TNTHNELDKLNRSFFWNKDNNYKP--LIGWDKICKPTQQGGL 300
+LDK+ R+FFW + K LI W KICK ++GGL
Sbjct: 823 KTITYKLDKIRRTFFWQGGDTKKKYHLIKWTKICKSKKKGGL 864
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 73.9 bits (180), Expect = 2e-11
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Frame = +1
Query: 1 GSPIINGRVNSNTFADLLTSTQKQLTKWKANSLSQAGRTTLIKANLASRPNFLMQSFMLP 180
G P++ R+ S ++ LL +K++ W S AGR LIK+ L S NF + +F LP
Sbjct: 420 GLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLP 479
Query: 181 TNTHNELDKLNRSFFW--NKDNNYKPLIGWDKICKPTQQGGL 300
E+DKL SF W ++ +++K I WD +CKP +GGL
Sbjct: 480 RQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGL 521