BLASTX nr result
ID: Rheum21_contig00013235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00013235
(532 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004253204.1| PREDICTED: high mobility group B protein 9-l... 88 1e-15
gb|EMJ24408.1| hypothetical protein PRUPE_ppa009338mg [Prunus pe... 87 2e-15
ref|XP_006342557.1| PREDICTED: high mobility group B protein 9-l... 87 3e-15
ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-l... 87 3e-15
gb|ADN34129.1| high mobility group family [Cucumis melo subsp. m... 87 3e-15
ref|XP_004292927.1| PREDICTED: high mobility group B protein 9-l... 84 2e-14
gb|EOY15159.1| High mobility group family isoform 2 [Theobroma c... 84 2e-14
gb|EOY15158.1| High mobility group family isoform 1 [Theobroma c... 84 2e-14
ref|XP_002510615.1| transcription factor, putative [Ricinus comm... 84 2e-14
ref|XP_002307758.1| hypothetical protein POPTR_0005s26800g [Popu... 84 3e-14
gb|ABK95398.1| unknown [Populus trichocarpa] 84 3e-14
gb|EPS62946.1| high mobility group family, partial [Genlisea aurea] 83 4e-14
gb|EXB88223.1| High mobility group B protein 9 [Morus notabilis] 82 6e-14
ref|XP_006473735.1| PREDICTED: high mobility group B protein 9-l... 82 6e-14
ref|XP_006435276.1| hypothetical protein CICLE_v10001816mg [Citr... 82 6e-14
ref|XP_002889059.1| high mobility group family protein [Arabidop... 82 6e-14
ref|NP_177738.1| high mobility group B protein 9 [Arabidopsis th... 82 1e-13
ref|XP_006390237.1| hypothetical protein EUTSA_v10018826mg [Eutr... 81 1e-13
gb|ESW08127.1| hypothetical protein PHAVU_009G020700g [Phaseolus... 80 2e-13
ref|XP_006300534.1| hypothetical protein CARUB_v10020597mg [Caps... 80 2e-13
>ref|XP_004253204.1| PREDICTED: high mobility group B protein 9-like [Solanum
lycopersicum]
Length = 285
Score = 88.2 bits (217), Expect = 1e-15
Identities = 38/56 (67%), Positives = 50/56 (89%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+HA++KS+HP+REREF KMIGE+WNNL E++VYQ+ G+ DKER+QRELK+YKE
Sbjct: 221 EKHAMLKSLHPHREREFTKMIGESWNNLSPEEKMVYQEYGVKDKERYQRELKEYKE 276
>gb|EMJ24408.1| hypothetical protein PRUPE_ppa009338mg [Prunus persica]
Length = 296
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/56 (69%), Positives = 49/56 (87%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+W+NL A ERLVYQ IGL DKER+++ELK+YKE
Sbjct: 226 EKHYKLKSLYPNREREFTKMIGESWSNLTAEERLVYQNIGLQDKERYKKELKEYKE 281
>ref|XP_006342557.1| PREDICTED: high mobility group B protein 9-like [Solanum tuberosum]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/56 (66%), Positives = 50/56 (89%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H+++KSIHP+REREF KMIGE+WNNL E++VYQ+ G+ DKER+QR+LK+YKE
Sbjct: 227 EKHSMLKSIHPHREREFTKMIGESWNNLSPEEKMVYQEYGVKDKERYQRQLKEYKE 282
>ref|XP_004145526.1| PREDICTED: high mobility group B protein 9-like [Cucumis sativus]
gi|449519744|ref|XP_004166894.1| PREDICTED: high
mobility group B protein 9-like [Cucumis sativus]
Length = 324
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+WNNL ER+VYQ IGL DKER++RELK+YKE
Sbjct: 251 EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKE 306
>gb|ADN34129.1| high mobility group family [Cucumis melo subsp. melo]
Length = 324
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+WNNL ER+VYQ IGL DKER++RELK+YKE
Sbjct: 251 EKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRELKEYKE 306
>ref|XP_004292927.1| PREDICTED: high mobility group B protein 9-like [Fragaria vesca
subsp. vesca]
Length = 346
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/58 (63%), Positives = 48/58 (82%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKEIR 449
E+H KS++PNREREF KMIGE+W NL A ER+VYQ IG+ DKER++REL++YKE +
Sbjct: 266 EKHCKFKSLYPNREREFTKMIGESWTNLTAEERMVYQNIGVKDKERYKRELEEYKETK 323
>gb|EOY15159.1| High mobility group family isoform 2 [Theobroma cacao]
Length = 330
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/56 (67%), Positives = 48/56 (85%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+WN+L ER+VYQ IGL DKER++RELK+YKE
Sbjct: 260 EKHYKLKSLYPNREREFTKMIGESWNSLGPEERMVYQNIGLKDKERYKRELKEYKE 315
>gb|EOY15158.1| High mobility group family isoform 1 [Theobroma cacao]
Length = 336
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/56 (67%), Positives = 48/56 (85%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+WN+L ER+VYQ IGL DKER++RELK+YKE
Sbjct: 266 EKHYKLKSLYPNREREFTKMIGESWNSLGPEERMVYQNIGLKDKERYKRELKEYKE 321
>ref|XP_002510615.1| transcription factor, putative [Ricinus communis]
gi|223551316|gb|EEF52802.1| transcription factor,
putative [Ricinus communis]
Length = 338
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/56 (66%), Positives = 49/56 (87%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF K+IG++W+NL A ER+VYQ IGL DKER++RELK+YKE
Sbjct: 263 EKHYKLKSLYPNREREFTKIIGQSWSNLSAEERMVYQNIGLKDKERYKRELKEYKE 318
>ref|XP_002307758.1| hypothetical protein POPTR_0005s26800g [Populus trichocarpa]
gi|222857207|gb|EEE94754.1| hypothetical protein
POPTR_0005s26800g [Populus trichocarpa]
Length = 329
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/56 (66%), Positives = 49/56 (87%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIG++W++L A ER+VYQ IGL DKER++RELK+YKE
Sbjct: 253 EKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKE 308
>gb|ABK95398.1| unknown [Populus trichocarpa]
Length = 317
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/56 (66%), Positives = 49/56 (87%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIG++W++L A ER+VYQ IGL DKER++RELK+YKE
Sbjct: 241 EKHYKLKSLYPNREREFTKMIGQSWSSLSAEERMVYQNIGLKDKERYKRELKEYKE 296
>gb|EPS62946.1| high mobility group family, partial [Genlisea aurea]
Length = 278
Score = 82.8 bits (203), Expect = 4e-14
Identities = 35/56 (62%), Positives = 48/56 (85%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H+ +KS++PNREREF KMIGE+WN+L ER+VYQ GL DKER+Q+E+K+Y+E
Sbjct: 220 EKHSTLKSLYPNREREFTKMIGESWNSLSPEERVVYQNYGLKDKERYQKEMKEYRE 275
>gb|EXB88223.1| High mobility group B protein 9 [Morus notabilis]
Length = 277
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/56 (66%), Positives = 47/56 (83%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +K++ PNREREF KMIGE+W+NL ER+VYQ IGL DKER++RELK+YKE
Sbjct: 207 EKHYKLKALFPNREREFTKMIGESWSNLSPEERMVYQNIGLKDKERYRRELKEYKE 262
>ref|XP_006473735.1| PREDICTED: high mobility group B protein 9-like isoform X2 [Citrus
sinensis]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+W NL ER VYQ IGL DKER+ RELK+YKE
Sbjct: 260 EKHYKLKSLYPNREREFTKMIGESWTNLSPEERKVYQNIGLKDKERYNRELKEYKE 315
>ref|XP_006435276.1| hypothetical protein CICLE_v10001816mg [Citrus clementina]
gi|568839528|ref|XP_006473734.1| PREDICTED: high
mobility group B protein 9-like isoform X1 [Citrus
sinensis] gi|557537398|gb|ESR48516.1| hypothetical
protein CICLE_v10001816mg [Citrus clementina]
Length = 328
Score = 82.4 bits (202), Expect = 6e-14
Identities = 38/56 (67%), Positives = 45/56 (80%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PNREREF KMIGE+W NL ER VYQ IGL DKER+ RELK+YKE
Sbjct: 261 EKHYKLKSLYPNREREFTKMIGESWTNLSPEERKVYQNIGLKDKERYNRELKEYKE 316
>ref|XP_002889059.1| high mobility group family protein [Arabidopsis lyrata subsp.
lyrata] gi|297334900|gb|EFH65318.1| high mobility group
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 338
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKEIRGS 455
E+H +KS++PN+EREF K+IGE+W+NL ER+VYQ IGL DKER+QREL +Y+E
Sbjct: 268 EKHCKLKSLYPNKEREFTKIIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLRL 327
Query: 456 *DNNL 470
D N+
Sbjct: 328 RDGNM 332
>ref|NP_177738.1| high mobility group B protein 9 [Arabidopsis thaliana]
gi|75265821|sp|Q9SGS2.1|HMGB9_ARATH RecName: Full=High
mobility group B protein 9; AltName:
Full=Nucleosome/chromatin assembly factor group D 09;
Short=Nucleosome/chromatin assembly factor group D 9
gi|6573729|gb|AAF17649.1|AC009978_25 T23E18.4
[Arabidopsis thaliana] gi|20466328|gb|AAM20481.1|
unknown protein [Arabidopsis thaliana]
gi|31711812|gb|AAP68262.1| At1g76110 [Arabidopsis
thaliana] gi|332197676|gb|AEE35797.1| high mobility
group B protein 9 [Arabidopsis thaliana]
Length = 338
Score = 81.6 bits (200), Expect = 1e-13
Identities = 35/56 (62%), Positives = 47/56 (83%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PN+EREF K+IGE+W+NL ER+VYQ IGL DKER+QREL +Y+E
Sbjct: 268 EKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRE 323
>ref|XP_006390237.1| hypothetical protein EUTSA_v10018826mg [Eutrema salsugineum]
gi|557086671|gb|ESQ27523.1| hypothetical protein
EUTSA_v10018826mg [Eutrema salsugineum]
Length = 338
Score = 81.3 bits (199), Expect = 1e-13
Identities = 35/56 (62%), Positives = 47/56 (83%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PN+EREF K+IGE+W+NL ER+VYQ IGL DKER+QREL +Y+E
Sbjct: 268 EKHCKLKSLYPNKEREFTKIIGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRE 323
>gb|ESW08127.1| hypothetical protein PHAVU_009G020700g [Phaseolus vulgaris]
gi|561009221|gb|ESW08128.1| hypothetical protein
PHAVU_009G020700g [Phaseolus vulgaris]
Length = 323
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 207 RNEGKFKASM*QSKARGRRIGAEERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQ 386
RN+ ++ + + G E+H +K+++PNREREF KMIG++WN+L ER+VYQ
Sbjct: 232 RNKRRWDPNYPKPNRSGYNFFFAEKHYSLKALYPNREREFTKMIGQSWNSLNPEERMVYQ 291
Query: 387 KIGLDDKERHQRELKQYKE 443
IGL DKER++REL +YKE
Sbjct: 292 NIGLRDKERYKRELTEYKE 310
>ref|XP_006300534.1| hypothetical protein CARUB_v10020597mg [Capsella rubella]
gi|482569244|gb|EOA33432.1| hypothetical protein
CARUB_v10020597mg [Capsella rubella]
Length = 342
Score = 80.5 bits (197), Expect = 2e-13
Identities = 35/56 (62%), Positives = 46/56 (82%)
Frame = +3
Query: 276 ERHAVVKSIHPNREREFIKMIGEAWNNLIAIERLVYQKIGLDDKERHQRELKQYKE 443
E+H +KS++PN+EREF K+IGE+W+NL ER VYQ IGL DKER+QREL +Y+E
Sbjct: 272 EKHCKLKSLYPNKEREFTKIIGESWSNLSTEERTVYQNIGLKDKERYQRELNEYRE 327