BLASTX nr result

ID: Rheum21_contig00013227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00013227
         (298 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL58900.1|AF462806_1 AT3g06940/F17A9_9 [Arabidopsis thaliana...    57   2e-06
dbj|BAD95065.1| putative mudrA protein [Arabidopsis thaliana]          57   2e-06
gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsis tha...    57   2e-06
ref|XP_006297045.1| hypothetical protein CARUB_v10013043mg [Caps...    57   3e-06
ref|XP_006407888.1| hypothetical protein EUTSA_v10020138mg [Eutr...    56   4e-06
ref|XP_004241483.1| PREDICTED: uncharacterized protein LOC101249...    56   6e-06
ref|XP_006347383.1| PREDICTED: uncharacterized protein LOC102599...    55   1e-05

>gb|AAL58900.1|AF462806_1 AT3g06940/F17A9_9 [Arabidopsis thaliana] gi|17380908|gb|AAL36266.1|
           putative mudrA protein [Arabidopsis thaliana]
           gi|20855902|gb|AAM26637.1| AT3g06940/F17A9_9
           [Arabidopsis thaliana] gi|28393919|gb|AAO42367.1|
           putative mudrA protein [Arabidopsis thaliana]
          Length = 749

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = -2

Query: 264 VLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKAT 127
           V PP + R   + K+K+++PLD  KR + C++C G GHNKKTCKAT
Sbjct: 704 VTPPPTRRTPGRPKIKKVEPLDMMKRQLQCSKCKGLGHNKKTCKAT 749


>dbj|BAD95065.1| putative mudrA protein [Arabidopsis thaliana]
          Length = 177

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = -2

Query: 264 VLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKAT 127
           V PP + R   + K+K+++PLD  KR + C++C G GHNKKTCKAT
Sbjct: 132 VTPPPTRRTPGRPKIKKVEPLDMMKRQLQCSKCKGLGHNKKTCKAT 177


>gb|AAF26998.1|AC016827_9 putative mudrA protein [Arabidopsis thaliana]
          Length = 609

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = -2

Query: 264 VLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKAT 127
           V PP + R   + K+K+++PLD  KR + C++C G GHNKKTCKAT
Sbjct: 564 VTPPPTRRTPGRPKIKKVEPLDMMKRQLQCSKCKGLGHNKKTCKAT 609


>ref|XP_006297045.1| hypothetical protein CARUB_v10013043mg [Capsella rubella]
           gi|565478812|ref|XP_006297046.1| hypothetical protein
           CARUB_v10013043mg [Capsella rubella]
           gi|482565754|gb|EOA29943.1| hypothetical protein
           CARUB_v10013043mg [Capsella rubella]
           gi|482565755|gb|EOA29944.1| hypothetical protein
           CARUB_v10013043mg [Capsella rubella]
          Length = 748

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%)
 Frame = -2

Query: 264 VLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKAT 127
           V PP + R   + K+K+++PLD  KR + C++C G GHNKKTCKAT
Sbjct: 703 VTPPPTRRTPGRPKMKKVEPLDMIKRQLQCSQCKGLGHNKKTCKAT 748


>ref|XP_006407888.1| hypothetical protein EUTSA_v10020138mg [Eutrema salsugineum]
           gi|557109034|gb|ESQ49341.1| hypothetical protein
           EUTSA_v10020138mg [Eutrema salsugineum]
          Length = 749

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = -2

Query: 270 VEVLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKA 130
           V V PP + R   + K+K+++PLD  KR + C++C G GHNKKTCKA
Sbjct: 702 VAVTPPPTRRTPGRPKMKRVEPLDMIKRQLQCSKCKGLGHNKKTCKA 748


>ref|XP_004241483.1| PREDICTED: uncharacterized protein LOC101249650 [Solanum
           lycopersicum]
          Length = 887

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = -2

Query: 279 SKEVEVLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKATL 124
           S   +VLPP       ++K +Q K +DP KRTV C++C   GHNK +CKATL
Sbjct: 836 SDTADVLPPCPPELPIEEKPEQTKTMDPDKRTVTCSKCKEPGHNKASCKATL 887


>ref|XP_006347383.1| PREDICTED: uncharacterized protein LOC102599808 [Solanum tuberosum]
          Length = 888

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/52 (46%), Positives = 33/52 (63%)
 Frame = -2

Query: 279 SKEVEVLPPSSSRRSEQDKLKQIKPLDPSKRTVICTRCLGAGHNKKTCKATL 124
           S   +VLPP       ++K ++ K +DP KRTV C++C   GHNK +CKATL
Sbjct: 837 SDTADVLPPCPPESPIEEKPEETKTIDPDKRTVTCSKCKEPGHNKASCKATL 888


Top