BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012901
         (400 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding pro...    82   7e-14
ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO larg...    74   2e-11
ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding pro...    74   2e-11
ref|XP_002523404.1| rubisco subunit binding-protein beta subunit...    72   8e-11
ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding pro...    70   2e-10
ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidop...    69   8e-10
ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Caps...    67   2e-09
gb|EMJ09509.1| hypothetical protein PRUPE_ppa003093mg [Prunus pe...    67   3e-09
ref|XP_002297617.1| hypothetical protein POPTR_0001s03980g [Popu...    67   3e-09
ref|XP_006407212.1| hypothetical protein EUTSA_v10020346mg [Eutr...    65   7e-09
ref|XP_002303983.1| chaperonin precursor family protein [Populus...    65   9e-09
gb|EXB94815.1| Chaperonin 60 subunit beta 2 [Morus notabilis]          64   3e-08
gb|EOY32236.1| TCP-1/cpn60 chaperonin family protein [Theobroma ...    63   4e-08
gb|EXB55869.1| RuBisCO large subunit-binding protein subunit bet...    63   5e-08
ref|NP_001275097.1| chaperonin-60 beta subunit [Solanum tuberosu...    62   1e-07
emb|CAJ19275.1| beta chaperonin 60 [Solanum commersonii]               62   1e-07
gb|EOY26885.1| TCP-1/cpn60 chaperonin family protein [Theobroma ...    60   2e-07
ref|XP_004228946.1| PREDICTED: ruBisCO large subunit-binding pro...    60   2e-07
ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding pro...    60   2e-07
dbj|BAB11583.1| RuBisCO subunit binding-protein beta subunit pre...    60   3e-07

>ref|XP_002285746.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Vitis vinifera]
           gi|297746501|emb|CBI16557.3| unnamed protein product
           [Vitis vinifera]
          Length = 608

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 50/85 (58%), Positives = 57/85 (67%), Gaps = 13/85 (15%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP-------------EKLSSFTSICSNLPARTQNVTVRRNRMRSS 323
           M SAFT+  SVGSLAAP             ++LSSF SI S+   R QNV +RR R  S 
Sbjct: 1   MASAFTTMSSVGSLAAPGGRGMDKKLATSSDRLSSFASISSSSFGRRQNVVLRRTR--SP 58

Query: 324 RINAMAKELYFNKDGSAIRKLQNGV 398
           RINAMAK+LYFNKDGSAI+KLQ GV
Sbjct: 59  RINAMAKDLYFNKDGSAIKKLQTGV 83


>ref|XP_004159350.1| PREDICTED: LOW QUALITY PROTEIN: ruBisCO large subunit-binding
           protein subunit beta, chloroplastic-like [Cucumis
           sativus]
          Length = 608

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 13/85 (15%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP-------------EKLSSFTSICSNLPARTQNVTVRRNRMRSS 323
           M S FT+  S+G+LAAP             +KL+S TSI S    + Q+V +RRNR  SS
Sbjct: 1   MASTFTAMSSIGTLAAPGSRAMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNR--SS 58

Query: 324 RINAMAKELYFNKDGSAIRKLQNGV 398
           +I+AMAKEL+FN+DGSAI+KLQNGV
Sbjct: 59  KISAMAKELHFNQDGSAIKKLQNGV 83


>ref|XP_004144069.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Cucumis sativus]
          Length = 608

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 13/85 (15%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP-------------EKLSSFTSICSNLPARTQNVTVRRNRMRSS 323
           M S FT+  S+G+LAAP             +KL+S TSI S    + Q+V +RRNR  SS
Sbjct: 1   MASTFTAMSSIGTLAAPGSRVMDKKLLSSSDKLTSRTSISSFALPKRQSVVLRRNR--SS 58

Query: 324 RINAMAKELYFNKDGSAIRKLQNGV 398
           +I+AMAKEL+FN+DGSAI+KLQNGV
Sbjct: 59  KISAMAKELHFNQDGSAIKKLQNGV 83


>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 605

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 10/82 (12%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE----------KLSSFTSICSNLPARTQNVTVRRNRMRSSRIN 332
           M S FT+  SVGSL AP           +LSSF SI  +   R QNV +RR+R  S +I 
Sbjct: 1   MASTFTAMSSVGSLVAPNVDKKFASTSNRLSSFASISGSAFGRRQNVVLRRSR--SPKIC 58

Query: 333 AMAKELYFNKDGSAIRKLQNGV 398
           AMAK+L+FNKDGSAI+KLQ GV
Sbjct: 59  AMAKDLHFNKDGSAIKKLQTGV 80


>ref|XP_004294947.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 601

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 44/78 (56%), Positives = 53/78 (67%), Gaps = 6/78 (7%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP------EKLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAK 344
           M S F +  SVGSLAAP      +KLSS  SI S   ++  NV +RR R  S R++AMAK
Sbjct: 1   MASTFAAMTSVGSLAAPSGRVADKKLSSRASIASFSFSKRPNVALRRTR--SPRVSAMAK 58

Query: 345 ELYFNKDGSAIRKLQNGV 398
           EL+FNKDGSAI+KLQ GV
Sbjct: 59  ELHFNKDGSAIKKLQAGV 76


>ref|NP_187956.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
           gi|75311214|sp|Q9LJE4.1|CPNB2_ARATH RecName:
           Full=Chaperonin 60 subunit beta 2, chloroplastic;
           Short=CPN-60 beta 2; Flags: Precursor
           gi|9280299|dbj|BAB01754.1| GloEL protein; chaperonin, 60
           kDa [Arabidopsis thaliana] gi|332641841|gb|AEE75362.1|
           TCP-1/cpn60 chaperonin family protein [Arabidopsis
           thaliana]
          Length = 596

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE--KLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKELYF 356
           M S FT+T S+GSL AP   KLSS TSI S+   R  NV VRR+R     I   AKEL+F
Sbjct: 1   MASTFTATSSLGSLLAPNAIKLSSATSISSSSFGRRHNVCVRRSR---PAIVCAAKELHF 57

Query: 357 NKDGSAIRKLQNGV 398
           NKDG+ IRKLQ GV
Sbjct: 58  NKDGTTIRKLQTGV 71


>ref|XP_006297271.1| hypothetical protein CARUB_v10013285mg [Capsella rubella]
           gi|482565980|gb|EOA30169.1| hypothetical protein
           CARUB_v10013285mg [Capsella rubella]
          Length = 596

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE--KLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKELYF 356
           M SAFT+T S+GSL AP   KLSS TS+ S+   R QN+ +RR+R     I   AK+L+F
Sbjct: 1   MASAFTATSSLGSLVAPNAIKLSSATSLSSSSFGRRQNLCLRRSR---PAIVCAAKDLHF 57

Query: 357 NKDGSAIRKLQNGV 398
           NKDG+ IRKLQ GV
Sbjct: 58  NKDGTTIRKLQAGV 71


>gb|EMJ09509.1| hypothetical protein PRUPE_ppa003093mg [Prunus persica]
          Length = 605

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 44/81 (54%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP---------EKLSSFTSICSNLPARTQNVTVRRNRMRSSRINA 335
           M S F +  SVGSLAAP         + LSS  SI     +R  NV +RR R  S RI A
Sbjct: 1   MASTFAAMTSVGSLAAPSSRVIDRKFDNLSSRASISPFSFSRRHNVVLRRTR--SPRICA 58

Query: 336 MAKELYFNKDGSAIRKLQNGV 398
           MAKEL+FNKDGSAI+KLQ GV
Sbjct: 59  MAKELHFNKDGSAIKKLQTGV 79


>ref|XP_002297617.1| hypothetical protein POPTR_0001s03980g [Populus trichocarpa]
           gi|118486341|gb|ABK95011.1| unknown [Populus
           trichocarpa] gi|222844875|gb|EEE82422.1| hypothetical
           protein POPTR_0001s03980g [Populus trichocarpa]
          Length = 607

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 13/85 (15%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE-------------KLSSFTSICSNLPARTQNVTVRRNRMRSS 323
           M S FT+  S G+LAAP              KLSSF SI ++   R QNV + R+R  S 
Sbjct: 1   MASTFTAMSSAGTLAAPNARALDKKFAFSSNKLSSFASISASRFGRPQNVVLPRSR--SL 58

Query: 324 RINAMAKELYFNKDGSAIRKLQNGV 398
           ++NA AKEL+FNKDGSAIRKLQ GV
Sbjct: 59  KVNA-AKELHFNKDGSAIRKLQTGV 82


>ref|XP_006407212.1| hypothetical protein EUTSA_v10020346mg [Eutrema salsugineum]
           gi|557108358|gb|ESQ48665.1| hypothetical protein
           EUTSA_v10020346mg [Eutrema salsugineum]
          Length = 596

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 41/74 (55%), Positives = 48/74 (64%), Gaps = 2/74 (2%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE--KLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKELYF 356
           M S FT+T S+GSL AP   KLSS  SI S+   R QNV  RR+R     I   AKEL+F
Sbjct: 1   MASTFTATSSLGSLVAPNAHKLSSANSISSSSFGRRQNVCPRRSR---PAIVCAAKELHF 57

Query: 357 NKDGSAIRKLQNGV 398
           NKDG+ I+KLQ GV
Sbjct: 58  NKDGTTIKKLQTGV 71


>ref|XP_002303983.1| chaperonin precursor family protein [Populus trichocarpa]
           gi|222841415|gb|EEE78962.1| chaperonin precursor family
           protein [Populus trichocarpa]
          Length = 607

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 43/85 (50%), Positives = 53/85 (62%), Gaps = 13/85 (15%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE-------------KLSSFTSICSNLPARTQNVTVRRNRMRSS 323
           M S FT+  SVG+LAAP              KLSSF SI ++   R QNV + R+R    
Sbjct: 1   MASTFTAMSSVGTLAAPNGRVMDKKFVFSSNKLSSFASISASRFGRPQNVVLPRSR--PL 58

Query: 324 RINAMAKELYFNKDGSAIRKLQNGV 398
           ++NA AKEL+FNKDGSAI+KLQ GV
Sbjct: 59  KVNA-AKELHFNKDGSAIKKLQTGV 82


>gb|EXB94815.1| Chaperonin 60 subunit beta 2 [Morus notabilis]
          Length = 603

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 42/81 (51%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP---------EKLSSFTSICSNLPARTQNVTVRRNRMRSSRINA 335
           M S F +  S GSLAAP         +KLSS +SI S    R QN      R  S RI+A
Sbjct: 1   MASTFAAMSSAGSLAAPSSRVTDMKFQKLSSSSSISSCSFVRRQNFV---RRTPSPRISA 57

Query: 336 MAKELYFNKDGSAIRKLQNGV 398
           MAKEL+FNKDGS I+KLQ GV
Sbjct: 58  MAKELHFNKDGSTIKKLQTGV 78


>gb|EOY32236.1| TCP-1/cpn60 chaperonin family protein [Theobroma cacao]
          Length = 607

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE-------------KLSSFTSICSNLPARTQNVTVRRNRMRSS 323
           M S FT+  SVGS  AP              +LSSF SI S      QNV +RR R+   
Sbjct: 1   MASTFTAMSSVGSFVAPNGRVMDKKLASSSNRLSSFASISSTAFGMRQNVVLRRTRL--P 58

Query: 324 RINAMAKELYFNKDGSAIRKLQNGV 398
           +I+A AKEL+FNKDGSAI+KLQ GV
Sbjct: 59  KISA-AKELHFNKDGSAIKKLQTGV 82


>gb|EXB55869.1| RuBisCO large subunit-binding protein subunit beta [Morus
           notabilis]
          Length = 769

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 41/81 (50%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP---------EKLSSFTSICSNLPARTQNVTVRRNRMRSSRINA 335
           M S F +  S GSLAAP         +KLSS +SI S    + +NV     R    RI+A
Sbjct: 1   MASTFAAMSSAGSLAAPSGRVADIKFQKLSSSSSISSCSFVKRRNVV---RRTAPPRISA 57

Query: 336 MAKELYFNKDGSAIRKLQNGV 398
           MAKEL+FNKDGSAI+KLQ GV
Sbjct: 58  MAKELHFNKDGSAIKKLQTGV 78


>ref|NP_001275097.1| chaperonin-60 beta subunit [Solanum tuberosum]
           gi|1762130|gb|AAB39827.1| chaperonin-60 beta subunit
           [Solanum tuberosum]
          Length = 599

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE----KLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKEL 350
           M S F    S G LAAP     KLSS  +I S      +NV +R++R  +  I A AKEL
Sbjct: 1   MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALRKSRRPT--ILAAAKEL 58

Query: 351 YFNKDGSAIRKLQNGV 398
           +FNKDGSAI+KLQNGV
Sbjct: 59  HFNKDGSAIKKLQNGV 74


>emb|CAJ19275.1| beta chaperonin 60 [Solanum commersonii]
          Length = 600

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/76 (51%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE----KLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKEL 350
           M S F    S G LAAP     KLSS  +I S      +NV +R++R  +  I A AKEL
Sbjct: 1   MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALRKSRRLT--ILAAAKEL 58

Query: 351 YFNKDGSAIRKLQNGV 398
           +FNKDGSAI+KLQNGV
Sbjct: 59  HFNKDGSAIKKLQNGV 74


>gb|EOY26885.1| TCP-1/cpn60 chaperonin family protein [Theobroma cacao]
          Length = 608

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +3

Query: 174 LLSMTSAF--TSTFSVGSLAAPEKLSSFTSICSN-LPARTQNVTVRRNRMRSSRINAMAK 344
           LL  + AF  + T     L++  +LSSF SI S+ +  R QNV +RR    SS+I AMAK
Sbjct: 8   LLYSSPAFPCSRTMDKKFLSSSGRLSSFDSISSSAIVGRKQNVILRRGH--SSKIWAMAK 65

Query: 345 ELYFNKDGSAIRKLQNGV 398
           EL+FNKDGSAI+KLQ GV
Sbjct: 66  ELHFNKDGSAIKKLQTGV 83


>ref|XP_004228946.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Solanum lycopersicum]
          Length = 599

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAPE----KLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKEL 350
           M S F    S G LAAP     KLSS  +I S      +NV ++++R  +  I A AKEL
Sbjct: 1   MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALKKSRRPT--ILAAAKEL 58

Query: 351 YFNKDGSAIRKLQNGV 398
           +FNKDGSAI+KLQNGV
Sbjct: 59  HFNKDGSAIKKLQNGV 74


>ref|XP_003531529.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic [Glycine max]
          Length = 592

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 192 AFTSTFSVGSLAAPEKLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKELYFNKDGS 371
           A +STF+  S     KLSS  +I S    R  N  V   R R++R++AMAKEL+FNKDG+
Sbjct: 2   ASSSTFTAMSAC---KLSSSAAISSFPSRRRSNAVVLSRRSRAARVSAMAKELHFNKDGT 58

Query: 372 AIRKLQNGV 398
           AI+KLQ+GV
Sbjct: 59  AIKKLQSGV 67


>dbj|BAB11583.1| RuBisCO subunit binding-protein beta subunit precursor; chaperonin,
           60 kDa [Arabidopsis thaliana]
          Length = 596

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = +3

Query: 183 MTSAFTSTFSVGSLAAP--EKLSSFTSICSNLPARTQNVTVRRNRMRSSRINAMAKELYF 356
           M S F++T S+GS  AP   +LSSF SI S+   RTQ++  R+ R    +I A AK+L+F
Sbjct: 1   MASTFSATSSMGSSLAPPSNRLSSFVSISSSSFGRTQSIAQRKARF--PKIYA-AKQLHF 57

Query: 357 NKDGSAIRKLQNGV 398
           NKDG+AI+KLQ GV
Sbjct: 58  NKDGTAIKKLQAGV 71