BLASTX nr result

ID: Rheum21_contig00012880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012880
         (440 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY22041.1| Leo1-like family protein isoform 1 [Theobroma cac...    68   1e-09
ref|XP_002318586.2| hypothetical protein POPTR_0012s06710g [Popu...    65   9e-09
ref|XP_006440725.1| hypothetical protein CICLE_v10019267mg [Citr...    64   2e-08
ref|XP_006440724.1| hypothetical protein CICLE_v10019267mg [Citr...    64   2e-08
ref|XP_006477649.1| PREDICTED: RNA polymerase-associated protein...    63   4e-08
ref|XP_006477648.1| PREDICTED: RNA polymerase-associated protein...    63   4e-08
ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248...    57   2e-06
emb|CBI15135.3| unnamed protein product [Vitis vinifera]               57   2e-06

>gb|EOY22041.1| Leo1-like family protein isoform 1 [Theobroma cacao]
           gi|508774786|gb|EOY22042.1| Leo1-like family protein
           isoform 1 [Theobroma cacao] gi|508774787|gb|EOY22043.1|
           Leo1-like family protein isoform 1 [Theobroma cacao]
          Length = 630

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 46/129 (35%), Positives = 56/129 (43%)
 Frame = -3

Query: 387 EEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISDXXXXXXXXXXXXXXXXXXXXX 208
           EEKRHQMMQNLFG                   HPNY SD                     
Sbjct: 3   EEKRHQMMQNLFGDQSEEEEEIDSEHESNP--HPNYASDEAEGAMEPEGEGEAEVEGHDE 60

Query: 207 XXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYAQGGATSR 28
              ES+G++ +VE    +SE                  S+A++TDSD K EY Q   TSR
Sbjct: 61  AEVESDGDIRDVEPDPGESEGEREQSSQEVDIGDQREESEAKDTDSDDKEEYGQRVVTSR 120

Query: 27  RRDVVDSGS 1
           RRDV++SGS
Sbjct: 121 RRDVIESGS 129


>ref|XP_002318586.2| hypothetical protein POPTR_0012s06710g [Populus trichocarpa]
           gi|550326522|gb|EEE96806.2| hypothetical protein
           POPTR_0012s06710g [Populus trichocarpa]
          Length = 620

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 49/131 (37%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
 Frame = -3

Query: 387 EEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISD--XXXXXXXXXXXXXXXXXXX 214
           EEKRHQMMQNLFG                    PNY SD                     
Sbjct: 3   EEKRHQMMQNLFGDQSEEEEEIDSEHESNP--QPNYASDEAEGELRNDGEGEGEGEVDGQ 60

Query: 213 XXXXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYAQGGAT 34
                ESEGEM EVE    +SE                  SDA+++DSD+K EY    AT
Sbjct: 61  EDVHVESEGEMREVEPDPGESEGEREQSSQEVDIGDQRDESDAKDSDSDAKEEYGHRVAT 120

Query: 33  SRRRDVVDSGS 1
           SRRRDV++SGS
Sbjct: 121 SRRRDVIESGS 131


>ref|XP_006440725.1| hypothetical protein CICLE_v10019267mg [Citrus clementina]
           gi|557542987|gb|ESR53965.1| hypothetical protein
           CICLE_v10019267mg [Citrus clementina]
          Length = 639

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 49/136 (36%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
 Frame = -3

Query: 396 MKKEEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISD----XXXXXXXXXXXXXX 229
           M  EEKRHQMMQNLFG                  + PNY SD                  
Sbjct: 1   MGGEEKRHQMMQNLFGDQSEEEEEEIDSEHESNPQ-PNYASDEAEGGLEAEVEVEGEGEG 59

Query: 228 XXXXXXXXXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYA 49
                     ESEGEMH+ E    +SE                  S+A+ TDSD K EY 
Sbjct: 60  EVEGHGEAEVESEGEMHDAEPDPGESEGERDQSSQEVDVVDQREESEAKYTDSDEKEEYG 119

Query: 48  QGGATSRRRDVVDSGS 1
           Q  ATSRRR+V++SGS
Sbjct: 120 QRVATSRRREVIESGS 135


>ref|XP_006440724.1| hypothetical protein CICLE_v10019267mg [Citrus clementina]
           gi|557542986|gb|ESR53964.1| hypothetical protein
           CICLE_v10019267mg [Citrus clementina]
          Length = 638

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 49/136 (36%), Positives = 57/136 (41%), Gaps = 4/136 (2%)
 Frame = -3

Query: 396 MKKEEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISD----XXXXXXXXXXXXXX 229
           M  EEKRHQMMQNLFG                  + PNY SD                  
Sbjct: 1   MGGEEKRHQMMQNLFGDQSEEEEEEIDSEHESNPQ-PNYASDEAEGGLEAEVEVEGEGEG 59

Query: 228 XXXXXXXXXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYA 49
                     ESEGEMH+ E    +SE                  S+A+ TDSD K EY 
Sbjct: 60  EVEGHGEAEVESEGEMHDAEPDPGESEGERDQSSQEVDVVDQREESEAKYTDSDEKEEYG 119

Query: 48  QGGATSRRRDVVDSGS 1
           Q  ATSRRR+V++SGS
Sbjct: 120 QRVATSRRREVIESGS 135


>ref|XP_006477649.1| PREDICTED: RNA polymerase-associated protein LEO1-like isoform X2
           [Citrus sinensis]
          Length = 638

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 49/136 (36%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
 Frame = -3

Query: 396 MKKEEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISD----XXXXXXXXXXXXXX 229
           M  EEKRHQMMQNLFG                  + PNY SD                  
Sbjct: 1   MGGEEKRHQMMQNLFGDQSEEEEEEIDSEHESNPQ-PNYASDEAEGGLEAEVEVEGEGEG 59

Query: 228 XXXXXXXXXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYA 49
                     ESEGEMH+ E     SE                  S+A+ TDSD K EY 
Sbjct: 60  EVEGHGEAEVESEGEMHDAEPDPGQSEGERDQSSQEVDVVDQREESEAKYTDSDEKEEYG 119

Query: 48  QGGATSRRRDVVDSGS 1
           Q  ATSRRR+V++SGS
Sbjct: 120 QRVATSRRREVIESGS 135


>ref|XP_006477648.1| PREDICTED: RNA polymerase-associated protein LEO1-like isoform X1
           [Citrus sinensis]
          Length = 639

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 49/136 (36%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
 Frame = -3

Query: 396 MKKEEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISD----XXXXXXXXXXXXXX 229
           M  EEKRHQMMQNLFG                  + PNY SD                  
Sbjct: 1   MGGEEKRHQMMQNLFGDQSEEEEEEIDSEHESNPQ-PNYASDEAEGGLEAEVEVEGEGEG 59

Query: 228 XXXXXXXXXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYA 49
                     ESEGEMH+ E     SE                  S+A+ TDSD K EY 
Sbjct: 60  EVEGHGEAEVESEGEMHDAEPDPGQSEGERDQSSQEVDVVDQREESEAKYTDSDEKEEYG 119

Query: 48  QGGATSRRRDVVDSGS 1
           Q  ATSRRR+V++SGS
Sbjct: 120 QRVATSRRREVIESGS 135


>ref|XP_002280975.2| PREDICTED: uncharacterized protein LOC100248444 [Vitis vinifera]
          Length = 623

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/129 (34%), Positives = 52/129 (40%)
 Frame = -3

Query: 387 EEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISDXXXXXXXXXXXXXXXXXXXXX 208
           E KRHQMMQNLFG                  + P YISD                     
Sbjct: 3   EHKRHQMMQNLFGDQSEEEEEEIDSEHESNPQ-PGYISDEGEGGPEPEGEGEIEGQGEAE 61

Query: 207 XXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYAQGGATSR 28
               SEGE+ +V+    +SEA                 S+ RET SD K  Y Q   TSR
Sbjct: 62  VE--SEGELRDVDPDPGESEAERDQSSEDVEVGDQREESEGRETGSDEKEGYGQRVVTSR 119

Query: 27  RRDVVDSGS 1
           RRDV++SGS
Sbjct: 120 RRDVIESGS 128


>emb|CBI15135.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 44/129 (34%), Positives = 52/129 (40%)
 Frame = -3

Query: 387 EEKRHQMMQNLFGXXXXXXXXXXXXXXXXXSRHPNYISDXXXXXXXXXXXXXXXXXXXXX 208
           E KRHQMMQNLFG                  + P YISD                     
Sbjct: 3   EHKRHQMMQNLFGDQSEEEEEEIDSEHESNPQ-PGYISDEGEGGPEPEGEGEIEGQGEAE 61

Query: 207 XXXESEGEMHEVEQQAVDSEAXXXXXXXXXXXXXXXXXSDARETDSDSKGEYAQGGATSR 28
               SEGE+ +V+    +SEA                 S+ RET SD K  Y Q   TSR
Sbjct: 62  VE--SEGELRDVDPDPGESEAERDQSSEDVEVGDQREESEGRETGSDEKEGYGQRVVTSR 119

Query: 27  RRDVVDSGS 1
           RRDV++SGS
Sbjct: 120 RRDVIESGS 128


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