BLASTX nr result
ID: Rheum21_contig00012875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012875
(426 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB37123.1| 50S ribosomal protein L27 [Morus notabilis] 81 1e-13
ref|XP_004513077.1| PREDICTED: 50S ribosomal protein L27-like is... 81 1e-13
ref|XP_004498686.1| PREDICTED: 50S ribosomal protein L27-like [C... 81 1e-13
ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatu... 81 2e-13
gb|ESW20909.1| hypothetical protein PHAVU_005G024900g [Phaseolus... 80 3e-13
ref|XP_006434993.1| hypothetical protein CICLE_v10002763mg [Citr... 78 1e-12
ref|XP_006288834.1| hypothetical protein CARUB_v10002175mg [Caps... 78 1e-12
ref|XP_002873715.1| ribosomal protein L27 family protein [Arabid... 78 1e-12
ref|NP_001240083.1| uncharacterized protein LOC100782419 [Glycin... 78 1e-12
ref|XP_004245259.1| PREDICTED: 50S ribosomal protein L27-like [S... 78 1e-12
emb|CAB89332.1| ribosomal protein L27-like [Arabidopsis thaliana] 77 2e-12
ref|NP_568310.1| large subunit ribosomal protein L27 [Arabidopsi... 77 2e-12
ref|NP_565398.1| ribosomal protein L27 family protein [Arabidops... 77 2e-12
ref|XP_006590942.1| PREDICTED: probable 39S ribosomal protein L2... 77 3e-12
gb|ACU24525.1| unknown [Glycine max] 77 3e-12
ref|XP_006356646.1| PREDICTED: probable 39S ribosomal protein L2... 76 4e-12
ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [C... 75 7e-12
ref|XP_006398167.1| hypothetical protein EUTSA_v10001060mg [Eutr... 75 1e-11
gb|ADR71247.1| Mitochondrial 50S ribosomal protein L27 [Hevea br... 75 1e-11
ref|XP_006402016.1| hypothetical protein EUTSA_v10014899mg [Eutr... 74 2e-11
>gb|EXB37123.1| 50S ribosomal protein L27 [Morus notabilis]
Length = 179
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/59 (62%), Positives = 45/59 (76%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
I++MNF AS+ R+NL++L+ PVYS TD SG G L+ RRWATKKT GSTKNGRDS
Sbjct: 30 INIMNFTASICNRLNLKQLVSNPPVYSSATDVSGEGLSLIFRRWATKKTAGSTKNGRDS 88
>ref|XP_004513077.1| PREDICTED: 50S ribosomal protein L27-like isoform X1 [Cicer
arietinum] gi|502164196|ref|XP_004513078.1| PREDICTED:
50S ribosomal protein L27-like isoform X2 [Cicer
arietinum]
Length = 146
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFAASL +R+N++EL+ VPVY T D SG G L+ RRWATKKT GSTKNGRDS
Sbjct: 1 MNFAASLCRRLNIKELVTNVPVYRSTGDVSGEGLSLVFRRWATKKTAGSTKNGRDS 56
>ref|XP_004498686.1| PREDICTED: 50S ribosomal protein L27-like [Cicer arietinum]
Length = 146
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/56 (67%), Positives = 44/56 (78%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFAASL +R+N++EL+ VPVY T D SG G L+ RRWATKKT GSTKNGRDS
Sbjct: 1 MNFAASLCRRLNIKELVTNVPVYRSTGDVSGEGLSLVFRRWATKKTAGSTKNGRDS 56
>ref|XP_003598463.1| 50S ribosomal protein L27 [Medicago truncatula]
gi|217071060|gb|ACJ83890.1| unknown [Medicago
truncatula] gi|355487511|gb|AES68714.1| 50S ribosomal
protein L27 [Medicago truncatula]
gi|388495594|gb|AFK35863.1| unknown [Medicago
truncatula] gi|388500166|gb|AFK38149.1| unknown
[Medicago truncatula]
Length = 148
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFA+SL +R+N++EL+ VPVY T D SG G L+ RRWATKKT GSTKNGRDS
Sbjct: 1 MNFASSLCRRLNIKELVTNVPVYRSTADVSGEGLSLVFRRWATKKTAGSTKNGRDS 56
>gb|ESW20909.1| hypothetical protein PHAVU_005G024900g [Phaseolus vulgaris]
Length = 146
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/56 (64%), Positives = 44/56 (78%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFAAS +R+N++EL+ VPVY T+D SG G ++ RRWATKKT GSTKNGRDS
Sbjct: 1 MNFAASFCRRLNIKELVTNVPVYRSTSDVSGEGLSMVFRRWATKKTAGSTKNGRDS 56
>ref|XP_006434993.1| hypothetical protein CICLE_v10002763mg [Citrus clementina]
gi|568839036|ref|XP_006473501.1| PREDICTED: probable 39S
ribosomal protein L27, mitochondrial-like isoform X1
[Citrus sinensis] gi|557537115|gb|ESR48233.1|
hypothetical protein CICLE_v10002763mg [Citrus
clementina]
Length = 153
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/59 (61%), Positives = 43/59 (72%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
+SM NFA +L KR+N++EL+ V VY D S GG L+ RRWATKKT GSTKNGRDS
Sbjct: 1 MSMFNFANTLCKRLNVKELVSNVSVYGSVADGSAGGLSLMFRRWATKKTAGSTKNGRDS 59
>ref|XP_006288834.1| hypothetical protein CARUB_v10002175mg [Capsella rubella]
gi|482557540|gb|EOA21732.1| hypothetical protein
CARUB_v10002175mg [Capsella rubella]
Length = 156
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/62 (61%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ N AASL +RV+LREL+ EVP YSG++ D S G L+++RWATKKT GSTKNGRD
Sbjct: 1 MNFFNSAASLCRRVSLRELITEVPAYSGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 420 SN 425
SN
Sbjct: 61 SN 62
>ref|XP_002873715.1| ribosomal protein L27 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297319552|gb|EFH49974.1| ribosomal protein
L27 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 154
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/62 (59%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ +N AAS+ +RV+LREL+ EVP YSG++ D S G L+++RWATKKT GSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 420 SN 425
SN
Sbjct: 61 SN 62
>ref|NP_001240083.1| uncharacterized protein LOC100782419 [Glycine max]
gi|571448350|ref|XP_006577802.1| PREDICTED:
uncharacterized protein LOC100782419 isoform X1 [Glycine
max] gi|255638454|gb|ACU19536.1| unknown [Glycine max]
gi|255638528|gb|ACU19572.1| unknown [Glycine max]
Length = 147
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/56 (64%), Positives = 42/56 (75%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFAASL +R+N++EL VPVY T+D SG G RRWA+KKT GSTKNGRDS
Sbjct: 1 MNFAASLCRRLNIKELATNVPVYKSTSDVSGEGLSFTFRRWASKKTAGSTKNGRDS 56
>ref|XP_004245259.1| PREDICTED: 50S ribosomal protein L27-like [Solanum lycopersicum]
Length = 147
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/57 (63%), Positives = 42/57 (73%)
Frame = +3
Query: 252 MMNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MMN A SL +R+N+REL+ P Y+ TD SG G L+ RRWATKKT GSTKNGRDS
Sbjct: 1 MMNAATSLFRRLNIRELVTSTPAYNTATDVSGDGLSLMFRRWATKKTAGSTKNGRDS 57
>emb|CAB89332.1| ribosomal protein L27-like [Arabidopsis thaliana]
Length = 162
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ +N AAS+ +RV+LREL+ EVP YSG++ D S G L+ +RWATKKT GSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVFKRWATKKTAGSTKNGRD 60
Query: 420 SN 425
SN
Sbjct: 61 SN 62
>ref|NP_568310.1| large subunit ribosomal protein L27 [Arabidopsis thaliana]
gi|15081777|gb|AAK82543.1| AT5g15220/F8M21_110
[Arabidopsis thaliana] gi|18958058|gb|AAL79602.1|
AT5g15220/F8M21_110 [Arabidopsis thaliana]
gi|332004748|gb|AED92131.1| large subunit ribosomal
protein L27 [Arabidopsis thaliana]
Length = 154
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/62 (59%), Positives = 48/62 (77%), Gaps = 2/62 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ +N AAS+ +RV+LREL+ EVP YSG++ D S G L+ +RWATKKT GSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYSGSSISDGSSSGLSLVFKRWATKKTAGSTKNGRD 60
Query: 420 SN 425
SN
Sbjct: 61 SN 62
>ref|NP_565398.1| ribosomal protein L27 family protein [Arabidopsis thaliana]
gi|30679813|ref|NP_849961.1| ribosomal protein L27
family protein [Arabidopsis thaliana]
gi|145328738|ref|NP_001077904.1| ribosomal protein L27
family protein [Arabidopsis thaliana]
gi|20197282|gb|AAC64229.2| 50S ribosomal protein L27
[Arabidopsis thaliana] gi|26452172|dbj|BAC43174.1|
putative 50S ribosomal protein L27 [Arabidopsis
thaliana] gi|28372840|gb|AAO39902.1| At2g16930
[Arabidopsis thaliana] gi|330251461|gb|AEC06555.1|
ribosomal protein L27 family protein [Arabidopsis
thaliana] gi|330251462|gb|AEC06556.1| ribosomal protein
L27 family protein [Arabidopsis thaliana]
gi|330251463|gb|AEC06557.1| ribosomal protein L27 family
protein [Arabidopsis thaliana]
Length = 154
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 2/62 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ +N AAS+ +RV+LREL+ EVP Y+G++ D S G L+++RWATKKT GSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 420 SN 425
SN
Sbjct: 61 SN 62
>ref|XP_006590942.1| PREDICTED: probable 39S ribosomal protein L27, mitochondrial-like
[Glycine max]
Length = 147
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFAASL +R+N++EL+ VPVY T+ SG G L RRWA+KKT GSTKNGRDS
Sbjct: 1 MNFAASLCRRLNIKELVTYVPVYRSTSGVSGEGLNLAFRRWASKKTAGSTKNGRDS 56
>gb|ACU24525.1| unknown [Glycine max]
Length = 147
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/56 (64%), Positives = 43/56 (76%)
Frame = +3
Query: 255 MNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MNFAASL +R+N++EL+ VPVY T+ SG G L RRWA+KKT GSTKNGRDS
Sbjct: 1 MNFAASLCRRLNIKELVTYVPVYRSTSGVSGEGLNLAFRRWASKKTAGSTKNGRDS 56
>ref|XP_006356646.1| PREDICTED: probable 39S ribosomal protein L27, mitochondrial-like
[Solanum tuberosum]
Length = 147
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +3
Query: 252 MMNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
MMN A SL +R+N+REL+ P Y+ +D SG G L+ RRWATKKT GSTKNGRDS
Sbjct: 1 MMNAATSLFRRLNIRELVTSTPAYNTASDVSGDGLSLMFRRWATKKTAGSTKNGRDS 57
>ref|XP_004139171.1| PREDICTED: 50S ribosomal protein L27-like [Cucumis sativus]
gi|449482828|ref|XP_004156416.1| PREDICTED: 50S
ribosomal protein L27-like [Cucumis sativus]
Length = 148
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 252 MMNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDSN 425
M+N A + KR+N+++L+ VPVYS +D + G LL RRWATKKT GSTKNGRDSN
Sbjct: 1 MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSN 58
>ref|XP_006398167.1| hypothetical protein EUTSA_v10001060mg [Eutrema salsugineum]
gi|557099256|gb|ESQ39620.1| hypothetical protein
EUTSA_v10001060mg [Eutrema salsugineum]
Length = 152
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ +N AAS+ +RV+LREL+ EVP Y+G++ D S G L+++RWATKKT GSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELITEVPAYTGSSISDGSSSGLSLVLKRWATKKTAGSTKNGRD 60
Query: 420 S 422
S
Sbjct: 61 S 61
>gb|ADR71247.1| Mitochondrial 50S ribosomal protein L27 [Hevea brasiliensis]
Length = 149
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +3
Query: 252 MMNFAASLSKRVNLRELLHEVPVYSGTTDASGGGFGLLIRRWATKKTGGSTKNGRDS 422
M NF + R+ ++EL+ VPVY+ TD S GG L++RRWATKKT GSTKNGRDS
Sbjct: 1 MSNFTTIICNRLKVKELVSNVPVYASLTDGSAGGLSLILRRWATKKTAGSTKNGRDS 57
>ref|XP_006402016.1| hypothetical protein EUTSA_v10014899mg [Eutrema salsugineum]
gi|557103106|gb|ESQ43469.1| hypothetical protein
EUTSA_v10014899mg [Eutrema salsugineum]
Length = 158
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 2/61 (3%)
Frame = +3
Query: 246 ISMMNFAASLSKRVNLRELLHEVPVYSGTT--DASGGGFGLLIRRWATKKTGGSTKNGRD 419
++ +N AAS+ +RV+LREL++EVP Y+G++ D S G L+ +RWATKKT GSTKNGRD
Sbjct: 1 MNFLNSAASICRRVSLRELINEVPAYTGSSISDGSTSGLSLVFKRWATKKTAGSTKNGRD 60
Query: 420 S 422
S
Sbjct: 61 S 61