BLASTX nr result
ID: Rheum21_contig00012711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012711
(210 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ24475.1| hypothetical protein PRUPE_ppa007259mg [Prunus pe... 77 3e-12
ref|XP_002304661.2| pyruvate dehydrogenase family protein [Popul... 76 5e-12
ref|XP_006438829.1| hypothetical protein CICLE_v10031662mg [Citr... 74 3e-11
gb|EPS73749.1| hypothetical protein M569_01007, partial [Genlise... 74 3e-11
ref|XP_004957304.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 6e-11
ref|NP_001105611.1| pyruvate dehydrogenase E1 beta subunit isofo... 72 6e-11
ref|NP_001105506.1| pyruvate dehydrogenase E1 beta subunit isofo... 72 6e-11
tpg|DAA40507.1| TPA: hypothetical protein ZEAMMB73_878401 [Zea m... 72 6e-11
ref|XP_002512633.1| pyruvate dehydrogenase, putative [Ricinus co... 72 6e-11
gb|ACG34647.1| pyruvate dehydrogenase E1 component subunit beta ... 72 6e-11
gb|ACG32706.1| pyruvate dehydrogenase E1 component subunit beta ... 72 6e-11
ref|XP_006660328.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 8e-11
ref|XP_004491655.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 8e-11
ref|XP_006282414.1| hypothetical protein CARUB_v100266331mg, par... 72 8e-11
dbj|BAJ93316.1| predicted protein [Hordeum vulgare subsp. vulgare] 72 8e-11
gb|EXB40354.1| hypothetical protein L484_017496 [Morus notabilis] 72 1e-10
ref|XP_006483030.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 1e-10
ref|XP_006366909.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 1e-10
ref|XP_004235365.1| PREDICTED: pyruvate dehydrogenase E1 compone... 72 1e-10
gb|EAZ09701.1| hypothetical protein OsI_31986 [Oryza sativa Indi... 72 1e-10
>gb|EMJ24475.1| hypothetical protein PRUPE_ppa007259mg [Prunus persica]
Length = 376
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/75 (58%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Frame = +3
Query: 6 MSRIMMQKLTRG-------GVPSSRFWHLQQTARAFSSSGKEMTVRDALNTALDEEMAAD 164
M I+ QK+ G G R RAFSSS KEMTVRDALN+ALDEEM+AD
Sbjct: 1 MLGILRQKVGAGSSSAMILGQSMQRIRPTTSALRAFSSSAKEMTVRDALNSALDEEMSAD 60
Query: 165 SRVFLMGEEVGEYQG 209
+VFLMGEEVGEYQG
Sbjct: 61 PKVFLMGEEVGEYQG 75
>ref|XP_002304661.2| pyruvate dehydrogenase family protein [Populus trichocarpa]
gi|566163024|ref|XP_002304660.2| hypothetical protein
POPTR_0003s16480g [Populus trichocarpa]
gi|118481185|gb|ABK92544.1| unknown [Populus
trichocarpa] gi|550343320|gb|EEE79640.2| pyruvate
dehydrogenase family protein [Populus trichocarpa]
gi|550343321|gb|EEE79639.2| hypothetical protein
POPTR_0003s16480g [Populus trichocarpa]
Length = 373
Score = 75.9 bits (185), Expect = 5e-12
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Frame = +3
Query: 6 MSRIMMQKLTRGGVPSSRFWHLQQTA----RAFSSSGKEMTVRDALNTALDEEMAADSRV 173
M I+ QK++ GG P F + A R +SS+ KE+TVR+ALN+ALDEEM+AD +V
Sbjct: 1 MFGIVRQKISAGGSPLLAFGQRIRPAVSAWRGYSSAAKEITVREALNSALDEEMSADPKV 60
Query: 174 FLMGEEVGEYQG 209
FLMGEEVGEYQG
Sbjct: 61 FLMGEEVGEYQG 72
>ref|XP_006438829.1| hypothetical protein CICLE_v10031662mg [Citrus clementina]
gi|557541025|gb|ESR52069.1| hypothetical protein
CICLE_v10031662mg [Citrus clementina]
Length = 416
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 KMSRIMMQKLTRGG-VPSSRFWHLQQTARAFSSSGKEMTVRDALNTALDEEMAADSRVFL 179
KM I+ QK+ GG P +R + R +SS+ K+M VR+ALN+ALDEEM+AD +VFL
Sbjct: 46 KMWGIIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFL 105
Query: 180 MGEEVGEYQG 209
MGEEVGEYQG
Sbjct: 106 MGEEVGEYQG 115
>gb|EPS73749.1| hypothetical protein M569_01007, partial [Genlisea aurea]
Length = 377
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Frame = +3
Query: 36 RGGVPSSRFWHLQQTA-RAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
RG V SS ++ RA+SSS KEMTVRDALN+AL+EEM+AD +VFLMGEEVGEYQG
Sbjct: 29 RGNVASSLQEGIRVAVLRAYSSSAKEMTVRDALNSALNEEMSADPKVFLMGEEVGEYQG 87
>ref|XP_004957304.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-2,
mitochondrial-like [Setaria italica]
Length = 373
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +S++ KEMTVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 28 EAARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQG 72
>ref|NP_001105611.1| pyruvate dehydrogenase E1 beta subunit isoform 3 [Zea mays]
gi|3851003|gb|AAC72194.1| pyruvate dehydrogenase E1 beta
subunit isoform 3 [Zea mays] gi|194688596|gb|ACF78382.1|
unknown [Zea mays] gi|194700736|gb|ACF84452.1| unknown
[Zea mays] gi|194702418|gb|ACF85293.1| unknown [Zea
mays]
Length = 374
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +S++ KEMTVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 29 EVARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQG 73
>ref|NP_001105506.1| pyruvate dehydrogenase E1 beta subunit isoform 2 [Zea mays]
gi|3851001|gb|AAC72193.1| pyruvate dehydrogenase E1 beta
subunit isoform 2 [Zea mays]
gi|414589935|tpg|DAA40506.1| TPA: Pyruvate dehydrogenase
E1 beta subunit isoform 3 [Zea mays]
Length = 374
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +S++ KEMTVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 29 EVARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQG 73
>tpg|DAA40507.1| TPA: hypothetical protein ZEAMMB73_878401 [Zea mays]
Length = 397
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +S++ KEMTVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 29 EVARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQG 73
>ref|XP_002512633.1| pyruvate dehydrogenase, putative [Ricinus communis]
gi|223548594|gb|EEF50085.1| pyruvate dehydrogenase,
putative [Ricinus communis]
Length = 368
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = +3
Query: 84 RAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
RA+SS+ KEMTVR+ALN+ALDEEM+AD +VFLMGEEVGEYQG
Sbjct: 26 RAYSSAAKEMTVREALNSALDEEMSADPKVFLMGEEVGEYQG 67
>gb|ACG34647.1| pyruvate dehydrogenase E1 component subunit beta [Zea mays]
Length = 375
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +S++ KEMTVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 30 EVARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQG 74
>gb|ACG32706.1| pyruvate dehydrogenase E1 component subunit beta [Zea mays]
Length = 374
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +S++ KEMTVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 29 EVARGYSAAAKEMTVRDALNSALDEEMSADPSVFLMGEEVGEYQG 73
>ref|XP_006660328.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial-like, partial [Oryza brachyantha]
Length = 364
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/44 (77%), Positives = 41/44 (93%)
Frame = +3
Query: 78 TARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ARA+S++ KEMTVR+ALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 20 SARAYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQG 63
>ref|XP_004491655.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta,
mitochondrial-like [Cicer arietinum]
Length = 360
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +3
Query: 84 RAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
R FSSS K+MTVRDALN+ALDEEM+AD +VFLMGEEVGEYQG
Sbjct: 18 RHFSSSTKQMTVRDALNSALDEEMSADPKVFLMGEEVGEYQG 59
>ref|XP_006282414.1| hypothetical protein CARUB_v100266331mg, partial [Capsella rubella]
gi|482551118|gb|EOA15312.1| hypothetical protein
CARUB_v100266331mg, partial [Capsella rubella]
Length = 350
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/71 (50%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Frame = +3
Query: 6 MSRIMMQKLTRGGVPSSRFWHLQQ---TARAFSSSGKEMTVRDALNTALDEEMAADSRVF 176
M I+ Q+ GG+ +S + +AR++++ KEMTVRDALN+A+DEEM+AD +VF
Sbjct: 1 MLGILRQRAIDGGLAASTLRRTRSALVSARSYAAGAKEMTVRDALNSAIDEEMSADPKVF 60
Query: 177 LMGEEVGEYQG 209
+MGEEVG+YQG
Sbjct: 61 VMGEEVGQYQG 71
>dbj|BAJ93316.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 376
Score = 72.0 bits (175), Expect = 8e-11
Identities = 34/45 (75%), Positives = 40/45 (88%)
Frame = +3
Query: 75 QTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+ AR +SS+ KE+TVRDALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 31 EAARGYSSAAKEITVRDALNSALDEEMSADPSVFLMGEEVGEYQG 75
>gb|EXB40354.1| hypothetical protein L484_017496 [Morus notabilis]
Length = 294
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/68 (55%), Positives = 49/68 (72%), Gaps = 3/68 (4%)
Frame = +3
Query: 15 IMMQKLTRGGVPSSRFWHLQQTARA---FSSSGKEMTVRDALNTALDEEMAADSRVFLMG 185
I+ QK+ G + ++ A A +SS+ KEMTVR+ALN+ALDEEM+AD +VFLMG
Sbjct: 4 ILRQKVGAGSSSALSLQRIRPVASALRHYSSAAKEMTVREALNSALDEEMSADPKVFLMG 63
Query: 186 EEVGEYQG 209
EEVGEYQG
Sbjct: 64 EEVGEYQG 71
>ref|XP_006483030.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568859000|ref|XP_006483031.1| PREDICTED: pyruvate
dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568859002|ref|XP_006483032.1| PREDICTED: pyruvate
dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X3 [Citrus sinensis]
gi|568859004|ref|XP_006483033.1| PREDICTED: pyruvate
dehydrogenase E1 component subunit beta-1,
mitochondrial-like isoform X4 [Citrus sinensis]
Length = 370
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/66 (57%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Frame = +3
Query: 15 IMMQKLTRGG-VPSSRFWHLQQTARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEE 191
I+ QK+ GG P +R + R +SS+ K+M VR+ALN+ALDEEM+AD +VFLMGEE
Sbjct: 4 IIRQKVAAGGGSPVARIRPVVSNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEE 63
Query: 192 VGEYQG 209
VGEYQG
Sbjct: 64 VGEYQG 69
>ref|XP_006366909.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1,
mitochondrial-like [Solanum tuberosum]
Length = 377
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 81 ARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+R FSS+ KEMTVRDALN+ALDEEM+AD +VF+MGEEVGEYQG
Sbjct: 31 SRNFSSATKEMTVRDALNSALDEEMSADPKVFIMGEEVGEYQG 73
>ref|XP_004235365.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta,
mitochondrial-like [Solanum lycopersicum]
Length = 377
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 81 ARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
+R FSS+ KEMTVRDALN+ALDEEM+AD +VF+MGEEVGEYQG
Sbjct: 31 SRNFSSATKEMTVRDALNSALDEEMSADPKVFIMGEEVGEYQG 73
>gb|EAZ09701.1| hypothetical protein OsI_31986 [Oryza sativa Indica Group]
Length = 376
Score = 71.6 bits (174), Expect = 1e-10
Identities = 34/43 (79%), Positives = 40/43 (93%)
Frame = +3
Query: 81 ARAFSSSGKEMTVRDALNTALDEEMAADSRVFLMGEEVGEYQG 209
ARA+S++ KEMTVR+ALN+ALDEEM+AD VFLMGEEVGEYQG
Sbjct: 33 ARAYSAAAKEMTVREALNSALDEEMSADPSVFLMGEEVGEYQG 75