BLASTX nr result
ID: Rheum21_contig00012544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012544
(940 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 338 2e-90
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 336 7e-90
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 336 7e-90
ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group] g... 336 9e-90
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 335 1e-89
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 334 3e-89
ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polype... 334 3e-89
gb|EOY33916.1| DNA-directed RNA polymerase II isoform 1 [Theobro... 332 2e-88
ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II su... 332 2e-88
gb|EMJ13349.1| hypothetical protein PRUPE_ppa012276mg [Prunus pe... 330 4e-88
ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep... 330 5e-88
gb|AFK39298.1| unknown [Lotus japonicus] 330 6e-88
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su... 330 6e-88
ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II su... 329 8e-88
gb|EMJ10876.1| hypothetical protein PRUPE_ppa012285mg [Prunus pe... 329 1e-87
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ... 328 2e-87
ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II su... 327 4e-87
ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polype... 326 7e-87
ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citr... 326 9e-87
ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 ... 326 9e-87
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 177
Score = 338 bits (866), Expect = 2e-90
Identities = 162/176 (92%), Positives = 172/176 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+KL+AKLMKDVEGTCSGRHGFVVA+TG++D+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
EGTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 336 bits (862), Expect = 7e-90
Identities = 161/176 (91%), Positives = 171/176 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+KL+AKLMKDVEGTCSGRHGFVVA+TG++D+GKGLIR
Sbjct: 60 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 119
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
EGTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 120 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 179
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 180 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGGA 235
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 336 bits (862), Expect = 7e-90
Identities = 161/176 (91%), Positives = 171/176 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+KL+AKLMKDVEGTCSGRHGFVVA+TG++D+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
EGTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGGA 176
>ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
gi|50878367|gb|AAT85142.1| putative RNA polymerase II
subunit 5 [Oryza sativa Japonica Group]
gi|113579034|dbj|BAF17397.1| Os05g0400700 [Oryza sativa
Japonica Group] gi|125552268|gb|EAY97977.1| hypothetical
protein OsI_19896 [Oryza sativa Indica Group]
gi|215704281|dbj|BAG93121.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218196761|gb|EEC79188.1| hypothetical protein
OsI_19893 [Oryza sativa Indica Group]
gi|222631528|gb|EEE63660.1| hypothetical protein
OsJ_18478 [Oryza sativa Japonica Group]
Length = 177
Score = 336 bits (861), Expect = 9e-90
Identities = 161/176 (91%), Positives = 172/176 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+KL++KL+KDVEGTCSGRHGFVVA+TG++DVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDVGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
EGTG+VTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 335 bits (860), Expect = 1e-89
Identities = 160/176 (90%), Positives = 172/176 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+KL++KL+KDVEGTCSGRHGFVVA+TG++D+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
EGTG+VTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449518487|ref|XP_004166273.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 176
Score = 334 bits (857), Expect = 3e-89
Identities = 161/176 (91%), Positives = 170/176 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LRE L++KLMKDVEGTCSGRHGFVVA+TGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP AA
Sbjct: 121 SGDVPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPSAA 176
>ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Zea mays]
gi|242056199|ref|XP_002457245.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|242090461|ref|XP_002441063.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|514750630|ref|XP_004962151.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Setaria italica]
gi|194708012|gb|ACF88090.1| unknown [Zea mays]
gi|195628342|gb|ACG36001.1| DNA-directed RNA polymerase
II 19 kDa polypeptide [Zea mays]
gi|241929220|gb|EES02365.1| hypothetical protein
SORBIDRAFT_03g003990 [Sorghum bicolor]
gi|241946348|gb|EES19493.1| hypothetical protein
SORBIDRAFT_09g019690 [Sorghum bicolor]
gi|413945277|gb|AFW77926.1| DNA-directed RNA polymerase
II polypeptide [Zea mays]
Length = 177
Score = 334 bits (856), Expect = 3e-89
Identities = 159/176 (90%), Positives = 172/176 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+KL++KL+KDVEGTCSGRHGFVVA+TG++D+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
EGTG+VTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPGAA
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGAA 176
>gb|EOY33916.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
Length = 176
Score = 332 bits (850), Expect = 2e-88
Identities = 160/176 (90%), Positives = 169/176 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LRE L++KLMKDVEGTCSGRHGFVVA+TGI++VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGE+LE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEVLEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA 176
>ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Solanum lycopersicum] gi|565385656|ref|XP_006358706.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Solanum tuberosum]
Length = 177
Score = 332 bits (850), Expect = 2e-88
Identities = 160/177 (90%), Positives = 170/177 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LREKL++KLMKDVEGTCSGRHGF+VA+TGI+ VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAAA 708
SGD PNYTTSDGSVKIQK+SEVRLKIIGTRVDATEIFCIGTIKDDFLGVI+DPG A
Sbjct: 121 SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGTNA 177
>gb|EMJ13349.1| hypothetical protein PRUPE_ppa012276mg [Prunus persica]
Length = 176
Score = 330 bits (847), Expect = 4e-88
Identities = 159/176 (90%), Positives = 169/176 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LRE L+AKLMKDVEGTCSG+HGFVVA+TGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFV+F VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176
>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223540340|gb|EEF41911.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 330 bits (846), Expect = 5e-88
Identities = 160/176 (90%), Positives = 168/176 (95%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPR+FG LRE L++KLMKDVEGTCSGRHGFVVA+TGI+ VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 330 bits (845), Expect = 6e-88
Identities = 161/175 (92%), Positives = 169/175 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPR+FG LR+ L+AKLMKDVEGTCSGRHGFVVAVTGI++VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGA 702
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVA 175
>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147841138|emb|CAN75204.1| hypothetical
protein VITISV_042914 [Vitis vinifera]
gi|297745997|emb|CBI16053.3| unnamed protein product
[Vitis vinifera]
Length = 176
Score = 330 bits (845), Expect = 6e-88
Identities = 159/173 (91%), Positives = 168/173 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LR+ L+AKL+KDVEGTCSGRHGFVVA+TGI++VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 696
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Fragaria vesca subsp. vesca]
Length = 176
Score = 329 bits (844), Expect = 8e-88
Identities = 158/175 (90%), Positives = 169/175 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LRE L+AKLMKDVEGTCSG+HGFVVA+TGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFV+F VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVSFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGA 702
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP +
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPAS 175
>gb|EMJ10876.1| hypothetical protein PRUPE_ppa012285mg [Prunus persica]
Length = 176
Score = 329 bits (843), Expect = 1e-87
Identities = 159/176 (90%), Positives = 168/176 (95%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LRE L+AKLMKDVEGTCSG+HGFVVA+TGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLRENLVAKLMKDVEGTCSGQHGFVVAITGIENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
SGD P YTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 SGDMPYYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPATA 176
>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform X1 [Glycine
max] gi|502141876|ref|XP_004504682.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum] gi|571455285|ref|XP_006580040.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Glycine max] gi|1173137|sp|P46279.1|RPB7_SOYBN
RecName: Full=DNA-directed RNA polymerase II subunit
RPB7; Short=RNA polymerase II subunit B7
gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
gi|255626843|gb|ACU13766.1| unknown [Glycine max]
gi|558695762|gb|AHA84235.1| DNA-directed RNA polymerase
II subunit RPB7 [Phaseolus vulgaris]
gi|561032343|gb|ESW30922.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032344|gb|ESW30923.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032345|gb|ESW30924.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
Length = 176
Score = 328 bits (840), Expect = 2e-87
Identities = 158/173 (91%), Positives = 168/173 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPR+FG LR+ L++KLMKDVEGTCSGRHGFVVAVTGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 696
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum]
Length = 176
Score = 327 bits (838), Expect = 4e-87
Identities = 157/173 (90%), Positives = 168/173 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPR+FG LR+ L++KLMKDVEGTCSGRHGFVVAVTGI+++GKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 696
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polypeptide family protein
[Populus trichocarpa] gi|222846170|gb|EEE83717.1|
DNA-directed RNA polymerase II 19 kDa polypeptide family
protein [Populus trichocarpa]
Length = 176
Score = 326 bits (836), Expect = 7e-87
Identities = 157/176 (89%), Positives = 168/176 (95%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPR FG LRE +++KLMKDVEGTCSGRHGFVVA+TGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGAA 705
+GD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP A
Sbjct: 121 TGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPANA 176
>ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citrus clementina]
gi|568870408|ref|XP_006488396.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Citrus sinensis]
gi|557526854|gb|ESR38160.1| hypothetical protein
CICLE_v10029380mg [Citrus clementina]
Length = 176
Score = 326 bits (835), Expect = 9e-87
Identities = 156/173 (90%), Positives = 167/173 (96%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPRHFG LRE +I+KLMKDVEGTCSGRHGFVVA+T ++++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRNLREHIISKLMKDVEGTCSGRHGFVVAITSVENIGKGLIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VV+MVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVSMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 696
SGD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173
>ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 [Medicago truncatula]
gi|217071674|gb|ACJ84197.1| unknown [Medicago
truncatula] gi|355509557|gb|AES90699.1| DNA-directed RNA
polymerase II subunit RPB7 [Medicago truncatula]
gi|388514911|gb|AFK45517.1| unknown [Medicago
truncatula]
Length = 176
Score = 326 bits (835), Expect = 9e-87
Identities = 156/173 (90%), Positives = 168/173 (97%)
Frame = +1
Query: 178 MFFHMVLERNMQLHPRHFGARLREKLIAKLMKDVEGTCSGRHGFVVAVTGIDDVGKGLIR 357
MFFH+VLERNMQLHPR+FG LR+ L++KLMKDVEGTCSGRHGFVVAVTGI+++GKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 358 EGTGFVTFNVKYQCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 537
+GTGFVTF VKYQCVVFRPFKGEILE+VVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 538 SGDTPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 696
+GD PNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP
Sbjct: 121 TGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDP 173