BLASTX nr result
ID: Rheum21_contig00012491
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012491
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus pe... 94 1e-17
ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II tra... 94 2e-17
ref|XP_006372643.1| RNA polymerase transcriptional regulation me... 94 2e-17
ref|XP_002331927.1| predicted protein [Populus trichocarpa] 94 2e-17
gb|EOY26989.1| RNA polymerase transcriptional regulation mediato... 92 5e-17
gb|EOY26988.1| RNA polymerase transcriptional regulation mediato... 92 5e-17
ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II tra... 92 7e-17
ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II tra... 92 7e-17
gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus... 91 2e-16
gb|AFK47538.1| unknown [Medicago truncatula] 90 4e-16
ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II tra... 89 5e-16
ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of ... 89 5e-16
ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II tra... 89 6e-16
ref|NP_001057150.1| Os06g0217500 [Oryza sativa Japonica Group] g... 86 4e-15
ref|XP_003564093.1| PREDICTED: putative mediator of RNA polymera... 86 4e-15
gb|EEE65334.1| hypothetical protein OsJ_20601 [Oryza sativa Japo... 86 4e-15
gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indi... 86 4e-15
gb|EXB74612.1| Putative mediator of RNA polymerase II transcript... 86 7e-15
ref|XP_006656774.1| PREDICTED: mediator of RNA polymerase II tra... 86 7e-15
gb|EMT25034.1| Putative mediator of RNA polymerase II transcript... 86 7e-15
>gb|EMJ18951.1| hypothetical protein PRUPE_ppa010369mg [Prunus persica]
Length = 252
Score = 94.4 bits (233), Expect = 1e-17
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALYYISKAF+T ASKLEK+GYV++E++ A E K KE I+FKE+KRVDHIL
Sbjct: 134 VFAARIGRALYYISKAFTTAASKLEKIGYVDSENETAAFESKVTKETIDFKEVKRVDHIL 193
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 194 QSLQRKL 200
>ref|XP_006343025.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Solanum tuberosum]
Length = 247
Score = 94.0 bits (232), Expect = 2e-17
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALY+ISKAF T +SKLEK+GYVE+E+D A+E K AKE I+FKE+KRVDHIL
Sbjct: 133 VFAARLGRALYHISKAFGTASSKLEKIGYVESENDSQASETKPAKEAIDFKELKRVDHIL 192
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 193 ASLQRKL 199
>ref|XP_006372643.1| RNA polymerase transcriptional regulation mediator-related family
protein [Populus trichocarpa]
gi|550319272|gb|ERP50440.1| RNA polymerase
transcriptional regulation mediator-related family
protein [Populus trichocarpa]
Length = 259
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+RVG ALYYISKAF T ASKLEK+GYV++E++ A+E K KE I+FKE+KR+DHIL
Sbjct: 141 VFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHIL 200
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 201 ASLQRKL 207
>ref|XP_002331927.1| predicted protein [Populus trichocarpa]
Length = 235
Score = 94.0 bits (232), Expect = 2e-17
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+RVG ALYYISKAF T ASKLEK+GYV++E++ A+E K KE I+FKE+KR+DHIL
Sbjct: 117 VFAARVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHIL 176
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 177 ASLQRKL 183
>gb|EOY26989.1| RNA polymerase transcriptional regulation mediator-related isoform
2 [Theobroma cacao]
Length = 184
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+RVG ALYYISKAF+T ASKLEK+GYV+ E++ E K KE I+FKE+KRVDHIL
Sbjct: 66 VFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKETIDFKEVKRVDHIL 125
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 126 ASLQRKL 132
>gb|EOY26988.1| RNA polymerase transcriptional regulation mediator-related isoform
1 [Theobroma cacao]
Length = 257
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/67 (68%), Positives = 55/67 (82%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+RVG ALYYISKAF+T ASKLEK+GYV+ E++ E K KE I+FKE+KRVDHIL
Sbjct: 139 VFAARVGRALYYISKAFTTAASKLEKIGYVDTENESETFESKGGKETIDFKEVKRVDHIL 198
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 199 ASLQRKL 205
>ref|XP_004235630.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 2 [Solanum lycopersicum]
Length = 247
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/67 (68%), Positives = 58/67 (86%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALY+ISKAF T +SKLEK+GYVE+E++ A+E K AKE I+FKE+KRVDHIL
Sbjct: 133 VFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQASETKPAKEAIDFKELKRVDHIL 192
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 193 ASLQRKL 199
>ref|XP_004235629.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform 1 [Solanum lycopersicum]
Length = 248
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/67 (68%), Positives = 58/67 (86%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALY+ISKAF T +SKLEK+GYVE+E++ A+E K AKE I+FKE+KRVDHIL
Sbjct: 133 VFAARLGRALYHISKAFGTASSKLEKIGYVESENNSQASETKPAKEAIDFKELKRVDHIL 192
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 193 ASLQRKL 199
>gb|ESW07605.1| hypothetical protein PHAVU_010G143300g [Phaseolus vulgaris]
Length = 247
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALYYI KAF+T ASKLEK+GYV++E++ E K AKE I+ KE+KRVDHIL
Sbjct: 129 VFAARIGRALYYIQKAFTTAASKLEKIGYVDSENETALVESKTAKETIDIKEVKRVDHIL 188
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 189 ASLQRKL 195
>gb|AFK47538.1| unknown [Medicago truncatula]
Length = 248
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALYYI KAF+T ASKLEK+GYV++E++ E K AKE I+ KEIKRVDHIL
Sbjct: 130 VFAARIGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKVAKETIDLKEIKRVDHIL 189
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 190 ASLQRKL 196
>ref|XP_004165668.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Cucumis sativus]
Length = 226
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+RV ALYYISKAF+T +SKLEK+GYV++E++ + E K AKE INFKE+KRVDHIL
Sbjct: 108 VFAARVSRALYYISKAFTTASSKLEKIGYVDSENE--SEEVKPAKETINFKEVKRVDHIL 165
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 166 ASLQRKL 172
>ref|XP_004149176.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 6-like [Cucumis sativus]
Length = 260
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/67 (68%), Positives = 57/67 (85%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+RV ALYYISKAF+T +SKLEK+GYV++E++ + E K AKE INFKE+KRVDHIL
Sbjct: 142 VFAARVSRALYYISKAFTTASSKLEKIGYVDSENE--SEEVKPAKETINFKEVKRVDHIL 199
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 200 ASLQRKL 206
>ref|XP_006585556.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like isoform X2 [Glycine max]
Length = 249
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R+G ALYYI KAF+T ASKLEK+GY ++E++ E K AKE I+ KE+KRVDHIL
Sbjct: 131 VFAARIGRALYYIQKAFTTAASKLEKIGYADSENETALLESKTAKETIDIKEVKRVDHIL 190
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 191 ASLQRKL 197
>ref|NP_001057150.1| Os06g0217500 [Oryza sativa Japonica Group]
gi|51091148|dbj|BAD35844.1| putative RNA polymerase
transcriptional regulation mediator [Oryza sativa
Japonica Group] gi|113595190|dbj|BAF19064.1|
Os06g0217500 [Oryza sativa Japonica Group]
Length = 242
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFASR+ A+++ISKAF+T SKLEK+G+VE E D A+E K KE I+ KE+KRVDHIL
Sbjct: 126 VFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRVDHIL 185
Query: 182 MSLQRKV 202
MSLQRK+
Sbjct: 186 MSLQRKL 192
>ref|XP_003564093.1| PREDICTED: putative mediator of RNA polymerase II transcription
subunit 6-like [Brachypodium distachyon]
Length = 260
Score = 86.3 bits (212), Expect = 4e-15
Identities = 44/67 (65%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFASR+ A+++ISKAF+T SKLEK+G VE ESD A+E K KE I+ KE+KRVDHIL
Sbjct: 142 VFASRISRAMHHISKAFTTACSKLEKIGNVETESDAAASESKTQKEAIDLKELKRVDHIL 201
Query: 182 MSLQRKV 202
MSLQRK+
Sbjct: 202 MSLQRKL 208
>gb|EEE65334.1| hypothetical protein OsJ_20601 [Oryza sativa Japonica Group]
Length = 168
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFASR+ A+++ISKAF+T SKLEK+G+VE E D A+E K KE I+ KE+KRVDHIL
Sbjct: 52 VFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRVDHIL 111
Query: 182 MSLQRKV 202
MSLQRK+
Sbjct: 112 MSLQRKL 118
>gb|EEC80233.1| hypothetical protein OsI_22170 [Oryza sativa Indica Group]
Length = 258
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFASR+ A+++ISKAF+T SKLEK+G+VE E D A+E K KE I+ KE+KRVDHIL
Sbjct: 142 VFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRVDHIL 201
Query: 182 MSLQRKV 202
MSLQRK+
Sbjct: 202 MSLQRKL 208
>gb|EXB74612.1| Putative mediator of RNA polymerase II transcription subunit 6
[Morus notabilis]
Length = 251
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/67 (59%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFA+R G ALYY+ KAF+ ASKLEK+GYV++E+++ + K KE I+FKE+KR+DHIL
Sbjct: 133 VFAARAGRALYYLQKAFTNAASKLEKIGYVDSENENAPLDSKIGKETIDFKEMKRIDHIL 192
Query: 182 MSLQRKV 202
SLQRK+
Sbjct: 193 ASLQRKL 199
>ref|XP_006656774.1| PREDICTED: mediator of RNA polymerase II transcription subunit
6-like [Oryza brachyantha]
Length = 251
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFASR+ A+++ISKAF+T SKLEK+G+VE E D A+E K KE I+ KE+KRVDHIL
Sbjct: 135 VFASRISRAMHHISKAFTTACSKLEKIGHVEAEPDTTASESKTQKETIDLKELKRVDHIL 194
Query: 182 MSLQRKV 202
MSLQRK+
Sbjct: 195 MSLQRKL 201
>gb|EMT25034.1| Putative mediator of RNA polymerase II transcription subunit 6
[Aegilops tauschii]
Length = 246
Score = 85.5 bits (210), Expect = 7e-15
Identities = 43/67 (64%), Positives = 53/67 (79%)
Frame = +2
Query: 2 VFASRVGWALYYISKAFSTVASKLEKVGYVENESDDGAAE*KHAKENINFKEIKRVDHIL 181
VFASR+ A+++ISKAFST SKLEK+G E E+D A+E K KE I+ KE+KRVDHIL
Sbjct: 130 VFASRISRAMHHISKAFSTACSKLEKIGNAETEADAAASESKAQKETIDLKELKRVDHIL 189
Query: 182 MSLQRKV 202
MSLQRK+
Sbjct: 190 MSLQRKL 196