BLASTX nr result

ID: Rheum21_contig00012353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012353
         (1762 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34371.3| unnamed protein product [Vitis vinifera]              117   2e-23
ref|XP_006422003.1| hypothetical protein CICLE_v10004200mg [Citr...    73   4e-10
emb|CBI22670.3| unnamed protein product [Vitis vinifera]               69   8e-09
emb|CAN76961.1| hypothetical protein VITISV_029501 [Vitis vinifera]    65   9e-08

>emb|CBI34371.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score =  117 bits (293), Expect = 2e-23
 Identities = 92/310 (29%), Positives = 142/310 (45%), Gaps = 5/310 (1%)
 Frame = +1

Query: 568  VLSTAGLAFTSSVNPG-RYPRVTEVHPGRQEE*KKKFRPS----ELVCANSGRYNMPMSE 732
            +LST GL  TS +N    + + ++     +   K   R S    ELV  +  R  MP+SE
Sbjct: 1    MLSTVGLELTSLINSDLTWKKASKGRSASRRARKPVARCSKAGGELVNKDPKRVAMPVSE 60

Query: 733  SEKHQGNVLGCHSIDKLEHLPIKKXXXXXXXXXXXXXXXXHVDENPNFSKNQDDPFQSLV 912
            SEK   +VLGC   +K EH+PIKK                    + N S   ++      
Sbjct: 61   SEKLGVSVLGCRFSEKAEHIPIKKRRFLFRSPSPP---------SKNSSPRSEETTDDAA 111

Query: 913  ACSVSCKSELVTLSVDKADVQGICPKKMDGSLKSIEDFSGXXXXXXXXXXXXXRGEFGYA 1092
            A S +   ++V   +D  D + +   K++    + EDFSG              GE G+ 
Sbjct: 112  AASGTDLGKIVDTELD-CDRKNLV--KVNEFPGANEDFSGISILAAAACSSSMGGEDGFE 168

Query: 1093 EDGSGVEEPSVNESAVDVSTTSEAHSFSKGFVKEEFVNTSDISIGGTSSCVTAAVAGEFV 1272
            E  S   E S +E  +DV   +E  S SKGF  E+ V+++ +S     SC +     E  
Sbjct: 169  EGVSRDGESSAHEGPLDVLVNNELCSLSKGFPMEDLVSSAKVSTEEAGSCSSPVPEKELA 228

Query: 1273 AISKADCTSEKVENLEKSIKEPSHEDGNPTVSSDVSCMRDEDVVGSQKLQSQDDRLHWDL 1452
            A S+ + +  K +   ++++  S  D + TVS D+   +D++   + +   +DDR HWDL
Sbjct: 229  ASSRTENSLLKCQAHGQNMEGTSFPDSHVTVSQDLLRNKDDETARTHESSLRDDRSHWDL 288

Query: 1453 NVVMDAWEEP 1482
            N  MDAWE P
Sbjct: 289  NTAMDAWERP 298


>ref|XP_006422003.1| hypothetical protein CICLE_v10004200mg [Citrus clementina]
            gi|567858642|ref|XP_006422004.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
            gi|567858644|ref|XP_006422005.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
            gi|567858646|ref|XP_006422006.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
            gi|568875115|ref|XP_006490655.1| PREDICTED:
            uncharacterized protein LOC102609710 [Citrus sinensis]
            gi|557523876|gb|ESR35243.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
            gi|557523877|gb|ESR35244.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
            gi|557523878|gb|ESR35245.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
            gi|557523879|gb|ESR35246.1| hypothetical protein
            CICLE_v10004200mg [Citrus clementina]
          Length = 1130

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 84/316 (26%), Positives = 127/316 (40%), Gaps = 9/316 (2%)
 Frame = +1

Query: 568  VLSTAGLAFTSSVNPG-RYPRVTEVHPGRQEE*KKKFRPSELVCANSGRYNM-------P 723
            ++STAGL  T+ +NP   + +V + +       +K    + ++ A     N+        
Sbjct: 1    MMSTAGLELTNFINPDLTWKKVAKGNRSATRRTRKPGGRNLIMSAEVTENNVCKRAEDTT 60

Query: 724  MSESEKHQGNVLGCHSIDKLEHLPIKKXXXXXXXXXXXXXXXXHVDENPNFSKNQDDPFQ 903
            +SESEK    VLG    D++EH+PIKK                      NF  +   P +
Sbjct: 61   VSESEKLGVAVLGRRFSDEIEHVPIKKRKF-------------------NFRSSSPSPPR 101

Query: 904  SLVACSVSCKSELVTLSVDKADVQGICPKKMDGSLKSIEDFSGXXXXXXXXXXXXXRGEF 1083
                 S+          V+ A  QG C      SL  +    G             + + 
Sbjct: 102  PQTPSSIEV--------VEHASGQGACSNSNGKSLLMVAPSHGVVDEKISGSL---KEKL 150

Query: 1084 GYAEDGSGVEEPSVNESAVDVSTTSEAHSFSKGFVKEEFVNTSDISIGGTSSCVTAAVAG 1263
            GY ED SG+E          ++  +  +SF       E     + S+    S V   + G
Sbjct: 151  GYREDFSGIEI---------LAAAACGNSFDADVDHPEEKPAVEGSVQDNGSTV---LMG 198

Query: 1264 EFVAISKA-DCTSEKVENLEKSIKEPSHEDGNPTVSSDVSCMRDEDVVGSQKLQSQDDRL 1440
            E VA+ +A DC S   + +E S    S +D + T   + S  ++   +     +S   RL
Sbjct: 199  EAVAVMEAADCPSRDADGIEDS----SVQDTSATFVQNSSNEKENRTLE----KSVPSRL 250

Query: 1441 HWDLNVVMDAWEEPSD 1488
            HWDLNVVMDAWEEP D
Sbjct: 251  HWDLNVVMDAWEEPCD 266


>emb|CBI22670.3| unnamed protein product [Vitis vinifera]
          Length = 1191

 Score = 68.6 bits (166), Expect = 8e-09
 Identities = 78/316 (24%), Positives = 124/316 (39%), Gaps = 9/316 (2%)
 Frame = +1

Query: 568  VLSTAGLAFTSSVNPGRYPRVTEVHPGRQEE*KKKFRP----SELVCANSGRY-----NM 720
            ++ T GL  T+ +NP    +   V  G +   ++  +P    S++    + +      N 
Sbjct: 1    MMGTVGLELTNFINPELTWKT--VAKGNRSASRRSRKPASRNSKMGAGQADKSPKKTENG 58

Query: 721  PMSESEKHQGNVLGCHSIDKLEHLPIKKXXXXXXXXXXXXXXXXHVDENPNFSKNQDDPF 900
             +SESEK    VLG    DK+E +PIKK                     P       +  
Sbjct: 59   SVSESEKLGVAVLGRRFSDKVEPVPIKKRRFMFQSPSPP----------PRTPSPPHEDS 108

Query: 901  QSLVACSVSCKSELVTLSVDKADVQGICPKKMDGSLKSIEDFSGXXXXXXXXXXXXXRGE 1080
            + LV    S   +  + S+ K  +      K   S+  + D                  E
Sbjct: 109  EQLVDSQHSSSQQSSSNSISKQQIMATHASKFIHSVDVVVD---------GRISEVTNEE 159

Query: 1081 FGYAEDGSGVEEPSVNESAVDVSTTSEAHSFSKGFVKEEFVNTSDISIGGTSSCVTAAVA 1260
             G  ED SG+E       A      S     ++   ++  V T +    G +S ++A   
Sbjct: 160  IGDGEDFSGIEM-----LAAAACNNSMGDDVTESTTEDGPVLTCE----GNNSSISAMPI 210

Query: 1261 GEFVAISKADCTSEKVENLEKSIKEPSHEDGNPTVSSDVSCMRDEDVVGSQKLQSQDDRL 1440
             E VA      T +K   +E  I+    +D +  V  ++   +D+  +  +   S+DDRL
Sbjct: 211  KETVASPATANTFQKDVAIEDDIEGSFSQDNSVAVLQNLHSDKDDGAL-KRSASSRDDRL 269

Query: 1441 HWDLNVVMDAWEEPSD 1488
            HWDLNVVMDAWE+P D
Sbjct: 270  HWDLNVVMDAWEQPDD 285


>emb|CAN76961.1| hypothetical protein VITISV_029501 [Vitis vinifera]
          Length = 1362

 Score = 65.1 bits (157), Expect = 9e-08
 Identities = 63/245 (25%), Positives = 94/245 (38%)
 Frame = +1

Query: 754  VLGCHSIDKLEHLPIKKXXXXXXXXXXXXXXXXHVDENPNFSKNQDDPFQSLVACSVSCK 933
            VLG    DK+EH+PIKK                     P       +  + LV    S  
Sbjct: 106  VLGRRFSDKVEHVPIKKRRFMFQSPSPP----------PRTPSPPHEDSEQLVDSQHSSS 155

Query: 934  SELVTLSVDKADVQGICPKKMDGSLKSIEDFSGXXXXXXXXXXXXXRGEFGYAEDGSGVE 1113
             +  + S+ K  +      K   S+  + D                  E G  ED SG+E
Sbjct: 156  QQSSSNSISKQQIMATHASKFIHSVDVVVD---------GRISEVTNEEIGEGEDFSGIE 206

Query: 1114 EPSVNESAVDVSTTSEAHSFSKGFVKEEFVNTSDISIGGTSSCVTAAVAGEFVAISKADC 1293
                   A      S     ++   ++  V T +    G  S ++A    E VA      
Sbjct: 207  M-----LAAAACNNSMGDDVTESTTEDGPVLTCE----GNDSSISAMPIKETVASPATAN 257

Query: 1294 TSEKVENLEKSIKEPSHEDGNPTVSSDVSCMRDEDVVGSQKLQSQDDRLHWDLNVVMDAW 1473
            T +K   +E  I+    +D +  V  ++   +D+  +  +   S+DDRLHWDLNVVMDAW
Sbjct: 258  TFQKDVAIEDDIEGSFSQDNSVPVLQNLHSDKDDGAL-KRSASSRDDRLHWDLNVVMDAW 316

Query: 1474 EEPSD 1488
            E+P D
Sbjct: 317  EQPDD 321


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