BLASTX nr result
ID: Rheum21_contig00012228
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012228
(1200 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus pe... 344 4e-92
gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [The... 340 7e-91
ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containi... 338 2e-90
ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containi... 338 3e-90
ref|XP_006424944.1| hypothetical protein CICLE_v10029104mg [Citr... 332 1e-88
ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containi... 332 1e-88
ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [A... 328 3e-87
ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containi... 327 5e-87
ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containi... 326 1e-86
gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus... 326 1e-86
ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containi... 325 2e-86
ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306... 325 2e-86
ref|XP_002517255.1| conserved hypothetical protein [Ricinus comm... 325 2e-86
ref|XP_002314145.2| pentatricopeptide repeat-containing family p... 324 4e-86
ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutr... 324 5e-86
ref|NP_190271.1| pentatricopeptide repeat-containing protein [Ar... 323 7e-86
ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containi... 323 9e-86
ref|XP_002875809.1| pentatricopeptide repeat-containing protein ... 323 1e-85
ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Caps... 322 1e-85
ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containi... 317 6e-84
>gb|EMJ06956.1| hypothetical protein PRUPE_ppa010266mg [Prunus persica]
Length = 256
Score = 344 bits (883), Expect = 4e-92
Identities = 175/264 (66%), Positives = 208/264 (78%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M R+ SR+KF +SI+ + L +T P L I E +++S + + CG
Sbjct: 1 MATRAFSRSKFAIFSSILLRGLKRTTTQETPL----LRKFRIPESEIESSKPI---CG-- 51
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+RLYHDGRPRGPLWRGKKLIGKEAL+VI G+KRFKDDEEKL KF+KNHVLRLLK+D IAV
Sbjct: 52 FRLYHDGRPRGPLWRGKKLIGKEALYVISGLKRFKDDEEKLGKFIKNHVLRLLKMDLIAV 111
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
LTEL+RQE+V LA+K+F VI+K+DWY PDVYLYKDLI+SLAR KKMD+VM LW+ M+K+D
Sbjct: 112 LTELERQEEVNLAIKVFNVIRKQDWYNPDVYLYKDLIISLARSKKMDDVMLLWDGMKKED 171
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPDSQTYTEVIRGFL GSPADAMNIYEDM SP+PPEELPFRI LRN+V
Sbjct: 172 LFPDSQTYTEVIRGFLSSGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNRV 231
Query: 410 KKDFEEIFPESHVYDPPEEIFGMQ 339
K+DFEE+FPE HVYDPPEEIFG++
Sbjct: 232 KQDFEELFPEQHVYDPPEEIFGVR 255
>gb|EOY33905.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 287
Score = 340 bits (872), Expect = 7e-91
Identities = 171/262 (65%), Positives = 202/262 (77%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M R ++K P SI+ Q L K+ P I Q +SH + G
Sbjct: 33 MAIRVFLKSKRPILTSILLQNLAKSPITRSPFPVNP----RIPHVQSNSHIPISGL---- 84
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+ YHDGRPRGPLW+GKKLIGKEALFVILG+KRFKDD++KL KF+K HVLRLLK++ IAV
Sbjct: 85 -KQYHDGRPRGPLWKGKKLIGKEALFVILGLKRFKDDDDKLQKFIKTHVLRLLKMELIAV 143
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
LTEL+RQE+ +LA+K+F+VIQK+DWY+PDVYLYKDLI++LAR KKMDE M+LWEYMRK++
Sbjct: 144 LTELERQEETSLAVKVFQVIQKQDWYKPDVYLYKDLIIALARFKKMDEAMKLWEYMRKEE 203
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPDSQTYTE+IRGFLR GSPADAMNIYEDM+KSP+PPEELPFRI LRNKV
Sbjct: 204 LFPDSQTYTEIIRGFLRDGSPADAMNIYEDMIKSPDPPEELPFRILLKGLLPHPLLRNKV 263
Query: 410 KKDFEEIFPESHVYDPPEEIFG 345
KKDFEE+FPE H YDPPEEIFG
Sbjct: 264 KKDFEELFPEKHAYDPPEEIFG 285
>ref|XP_002281924.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
isoform 1 [Vitis vinifera]
gi|359478900|ref|XP_003632183.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46870
isoform 2 [Vitis vinifera] gi|297745987|emb|CBI16043.3|
unnamed protein product [Vitis vinifera]
Length = 252
Score = 338 bits (868), Expect = 2e-90
Identities = 172/263 (65%), Positives = 208/263 (79%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M R+ SR+K P ++ + Q L K A + + + +V S++ L G
Sbjct: 1 MAIRAFSRSKIPIFSAKILQNLIK----APIKESTRFQFPVL---EVGSYKPLLGS---- 49
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+LYHDGRPRGPLWRGKKLIGKEALFVILG+KRFKDDEE L KF+K+HVLRLLK+D +AV
Sbjct: 50 -KLYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEENLRKFIKSHVLRLLKMDMVAV 108
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
LTEL+RQE+V+LA+++FRVI+K+DWY+PDVYLYKDLI++LA+CKKMD+ MQLWE MRK+D
Sbjct: 109 LTELERQEEVSLAVEVFRVIRKQDWYKPDVYLYKDLIIALAKCKKMDDAMQLWESMRKED 168
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPD QTYTEVIRGFLR GSPADAMNIYEDM KSP+PPEELPFRI LRN+V
Sbjct: 169 LFPDYQTYTEVIRGFLRYGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRV 228
Query: 410 KKDFEEIFPESHVYDPPEEIFGM 342
K+DFEEIFP+ HVYDPPEEIFG+
Sbjct: 229 KQDFEEIFPDRHVYDPPEEIFGV 251
>ref|XP_002276778.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
[Vitis vinifera] gi|297745785|emb|CBI15841.3| unnamed
protein product [Vitis vinifera]
Length = 252
Score = 338 bits (867), Expect = 3e-90
Identities = 172/263 (65%), Positives = 203/263 (77%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M R+ SR+K P ++ + Q L K+ + +V S++ L G
Sbjct: 1 MAIRAFSRSKIPIFSAKILQSLIKSPIKESTKFQFPVL-------EVASNKPLFGL---- 49
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+ YHDGRPRGPLWRGKKLIGKEALFVILG+KRFKDDEEKL KF+K+HVLRLLK+D IAV
Sbjct: 50 -KHYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDDEEKLRKFIKSHVLRLLKMDMIAV 108
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
LTEL+RQE+V LA+++FRV QK+DWY+PDVYLYKDLI++LA+CKKMD MQLWE MRK+D
Sbjct: 109 LTELERQEEVTLAVEVFRVFQKQDWYKPDVYLYKDLIIALAKCKKMDNAMQLWESMRKED 168
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPD QTYTEVIRGFLR GSPADAMNIYEDM KSP+PPEELPFRI LRN+V
Sbjct: 169 LFPDYQTYTEVIRGFLRHGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLRNRV 228
Query: 410 KKDFEEIFPESHVYDPPEEIFGM 342
K+DFEEIFP+ HVYDPPEEIFG+
Sbjct: 229 KQDFEEIFPDRHVYDPPEEIFGI 251
>ref|XP_006424944.1| hypothetical protein CICLE_v10029104mg [Citrus clementina]
gi|568870438|ref|XP_006488411.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g46870-like isoform X1 [Citrus sinensis]
gi|568870442|ref|XP_006488412.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g46870-like isoform X2 [Citrus sinensis]
gi|557526878|gb|ESR38184.1| hypothetical protein
CICLE_v10029104mg [Citrus clementina]
Length = 256
Score = 332 bits (852), Expect = 1e-88
Identities = 171/264 (64%), Positives = 199/264 (75%), Gaps = 2/264 (0%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVD--SHRALGGWCG 957
M R SR+K P ASIV Q LTK P+ + P VD +H + G
Sbjct: 1 MATRLFSRSKIPILASIVLQNLTKN-----PSKNFSFLAFKPKSPIVDFVAHEPILGL-- 53
Query: 956 STWRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKI 777
R YHDGRPRG LWRGKKLIGKEALFVILG+KRFKDDEEKL KF+K HVLRLLK+D +
Sbjct: 54 ---RQYHDGRPRGSLWRGKKLIGKEALFVILGLKRFKDDEEKLQKFIKTHVLRLLKMDIV 110
Query: 776 AVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRK 597
AVL EL+RQE+ LA+K+F +I+K+DWY+PD Y+YKDLI++LAR KM+E MQ+WE MRK
Sbjct: 111 AVLIELERQEETILAVKIFDIIRKQDWYQPDAYIYKDLIIALARTGKMNEAMQVWESMRK 170
Query: 596 DDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRN 417
+DLFPDSQTYTEVIRGFL+ GSPADAMNIYEDM+KSP+PPEELPFRI LR+
Sbjct: 171 EDLFPDSQTYTEVIRGFLKDGSPADAMNIYEDMIKSPDPPEELPFRILLKGLLPHPLLRS 230
Query: 416 KVKKDFEEIFPESHVYDPPEEIFG 345
KVKKDFEE+FPE H YDPPEEIFG
Sbjct: 231 KVKKDFEELFPEKHAYDPPEEIFG 254
>ref|XP_004291520.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like
[Fragaria vesca subsp. vesca]
Length = 255
Score = 332 bits (852), Expect = 1e-88
Identities = 170/262 (64%), Positives = 205/262 (78%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M R+ SR+KF +SI+ Q L +T P S + Q+ S + + CG
Sbjct: 1 MAVRAFSRSKFSTFSSILLQGLKRTPIRENPFPPKPSSPVS----QIQSCQPI---CG-- 51
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+RLYHDGRPRGPLWRGKKLIGKEAL+VI G+KRFKDDEE L KF+K+HVLRLLKLD IAV
Sbjct: 52 FRLYHDGRPRGPLWRGKKLIGKEALYVISGLKRFKDDEETLGKFIKSHVLRLLKLDMIAV 111
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
LTEL+RQE+V LA+K+F VI+K+DWY+PDVYLYKDLI+SLA+ KKMD+VM LW+ M+K+D
Sbjct: 112 LTELERQEEVNLAIKVFNVIRKQDWYKPDVYLYKDLIISLAKSKKMDDVMVLWDCMKKED 171
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPDSQT+TEVIRGFL GSPADAMNIYEDM +SP+PPE+LPFRI LRN+V
Sbjct: 172 LFPDSQTFTEVIRGFLSTGSPADAMNIYEDMKQSPDPPEQLPFRILLKGLLPHPLLRNRV 231
Query: 410 KKDFEEIFPESHVYDPPEEIFG 345
K+DFEE+FPE HVYDPP+EIFG
Sbjct: 232 KQDFEELFPEQHVYDPPQEIFG 253
>ref|XP_006858620.1| hypothetical protein AMTR_s00066p00023060 [Amborella trichopoda]
gi|548862731|gb|ERN20087.1| hypothetical protein
AMTR_s00066p00023060 [Amborella trichopoda]
Length = 265
Score = 328 bits (840), Expect = 3e-87
Identities = 168/269 (62%), Positives = 205/269 (76%), Gaps = 5/269 (1%)
Frame = -2
Query: 1130 MFARSISRTKFPNC-ASIVAQCLTKTLAAA----EPAGTLALSWSAIGEPQVDSHRALGG 966
M RS+S KFP I+ + K+ AA P+ L+ S + +H L
Sbjct: 1 MAVRSVS--KFPPLFLPILRSFILKSTDAAPFSLSPSQAYVLAVSQESLKHLRNHDEL-- 56
Query: 965 WCGSTWRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKL 786
+ G R YHDGRPRGPLWRGKKLIGKEALF+I G+KRFKDDE +LDKFVK+HV RLLK+
Sbjct: 57 FLGFAMRCYHDGRPRGPLWRGKKLIGKEALFIISGLKRFKDDEGQLDKFVKSHVSRLLKM 116
Query: 785 DKIAVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEY 606
D +AVL EL+RQE+V LALK+FRVIQKE+WY+PDVYLYKDLI++LAR K+M++ MQ+WE
Sbjct: 117 DMVAVLCELERQEEVILALKIFRVIQKENWYKPDVYLYKDLIIALARSKRMEDAMQIWEC 176
Query: 605 MRKDDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXX 426
MR++DLFPDSQTYTEVIRGFLR GSPADAMNIYEDM SPEPPEELP+R+
Sbjct: 177 MRREDLFPDSQTYTEVIRGFLRYGSPADAMNIYEDMKNSPEPPEELPYRVLLKGLLPHPL 236
Query: 425 LRNKVKKDFEEIFPESHVYDPPEEIFGMQ 339
LRN++K+DFEE+FP+ HVYDPPEEIFG++
Sbjct: 237 LRNRIKQDFEEMFPDRHVYDPPEEIFGLR 265
>ref|XP_004145279.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like
[Cucumis sativus] gi|449475090|ref|XP_004154371.1|
PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Cucumis sativus]
gi|449508514|ref|XP_004163333.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g46870-like [Cucumis sativus]
Length = 255
Score = 327 bits (839), Expect = 5e-87
Identities = 164/264 (62%), Positives = 204/264 (77%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M R SR+K P AS+ Q LT+ P S I + Q DS R + G+
Sbjct: 1 MAIRWFSRSKLPVFASVFLQGLTRRPIRDVPLPVK----STITDFQPDSRRPIWGF---- 52
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
RLYHDGRPRGPLWR +K IGKEALFVI G+KRFK+DEEK +KF+K+HV RLLKLD +AV
Sbjct: 53 -RLYHDGRPRGPLWRSRKAIGKEALFVIQGLKRFKEDEEKFEKFMKSHVSRLLKLDMVAV 111
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
L EL+RQE+VALA+K+FR+I+K+DWY+PDVY+YKDLI++LAR KKMD+ M+LWE MR+++
Sbjct: 112 LGELERQEEVALAVKIFRLIRKQDWYKPDVYIYKDLIIALARSKKMDDAMKLWESMREEN 171
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPDSQTYTEVIRGFLR GSP+DAMN+YEDM KSP+PP+ELPFRI LRN+V
Sbjct: 172 LFPDSQTYTEVIRGFLRYGSPSDAMNVYEDMKKSPDPPDELPFRILLKGLLPHPLLRNRV 231
Query: 410 KKDFEEIFPESHVYDPPEEIFGMQ 339
K+DFEE+FP+ HV+DPPEEIF ++
Sbjct: 232 KQDFEELFPDQHVFDPPEEIFSLR 255
>ref|XP_006360926.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Solanum tuberosum]
Length = 256
Score = 326 bits (836), Expect = 1e-86
Identities = 158/232 (68%), Positives = 186/232 (80%), Gaps = 12/232 (5%)
Frame = -2
Query: 998 PQVDSHRALGGWCGSTW------------RLYHDGRPRGPLWRGKKLIGKEALFVILGMK 855
P V S C ++W R YHDGRPRGPLWRGKKLIGKEALFVILG++
Sbjct: 25 PSVSSTLTSSSSCSTSWVPELSRSSVRDVRWYHDGRPRGPLWRGKKLIGKEALFVILGLR 84
Query: 854 RFKDDEEKLDKFVKNHVLRLLKLDKIAVLTELQRQEQVALALKMFRVIQKEDWYEPDVYL 675
RF+DDEEKLDKFVK HVLRLLK+D IAVL EL+RQE+V+LA+K+F VIQK+ WY+PDVYL
Sbjct: 85 RFRDDEEKLDKFVKTHVLRLLKMDMIAVLNELERQEEVSLAVKVFWVIQKQAWYQPDVYL 144
Query: 674 YKDLIVSLARCKKMDEVMQLWEYMRKDDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDML 495
YKDLI++LAR +KMD+ M+LWE MRK+DLFPD QT+TEVIRGFLR GSPADAMNI+EDM
Sbjct: 145 YKDLIIALARRRKMDDAMKLWESMRKEDLFPDCQTFTEVIRGFLRDGSPADAMNIFEDMK 204
Query: 494 KSPEPPEELPFRIXXXXXXXXXXLRNKVKKDFEEIFPESHVYDPPEEIFGMQ 339
KSP PPEELPFR+ LRN+VK+DFEEIFP+ H+YDPPEEIFG++
Sbjct: 205 KSPYPPEELPFRVLLKGLLPHPLLRNRVKQDFEEIFPDRHIYDPPEEIFGLR 256
>gb|ESW04024.1| hypothetical protein PHAVU_011G060800g [Phaseolus vulgaris]
Length = 254
Score = 326 bits (836), Expect = 1e-86
Identities = 152/204 (74%), Positives = 180/204 (88%)
Frame = -2
Query: 956 STWRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKI 777
S WRLYHDGRPRGPLW+GKKLIGKEALFV+LG+KRFKDD++KL KF+K+HVLRLLK+D I
Sbjct: 49 SFWRLYHDGRPRGPLWKGKKLIGKEALFVVLGLKRFKDDQDKLQKFIKSHVLRLLKMDMI 108
Query: 776 AVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRK 597
AVLTEL+RQEQV+LAL MF+V+QK+DWY+PD YLYKDLI++LAR KKM+EV LWE MRK
Sbjct: 109 AVLTELERQEQVSLALMMFKVMQKQDWYKPDTYLYKDLIIALARSKKMEEVSYLWESMRK 168
Query: 596 DDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRN 417
++LFPDSQT+TEVIRGFL GSPADAM++YEDM SP+PP+ELPFRI LRN
Sbjct: 169 ENLFPDSQTFTEVIRGFLNYGSPADAMDVYEDMKNSPDPPDELPFRILLKGLLPHPLLRN 228
Query: 416 KVKKDFEEIFPESHVYDPPEEIFG 345
KVK+DFEEIFP+S +YDPP+EIFG
Sbjct: 229 KVKQDFEEIFPDSSIYDPPQEIFG 252
>ref|XP_003537970.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Glycine max]
Length = 255
Score = 325 bits (834), Expect = 2e-86
Identities = 155/202 (76%), Positives = 176/202 (87%)
Frame = -2
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+R YHDGRPRGPLW+GKKLIGKEALFVI G KRF DDE+KL KF+K HVLRLLK+D IAV
Sbjct: 52 FRQYHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMDMIAV 111
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
LTEL+RQEQV+LAL MF+V+QK+DWY+PD YLYKDLI++LAR KKMDEV+QLWE MRK++
Sbjct: 112 LTELERQEQVSLALMMFKVMQKQDWYKPDAYLYKDLIIALARAKKMDEVLQLWESMRKEN 171
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPDSQTYTEVIRGFL GSPADAMNIYEDM SP+PPEELPFRI LRNKV
Sbjct: 172 LFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRNKV 231
Query: 410 KKDFEEIFPESHVYDPPEEIFG 345
K+DFEEIFP+S +YDPP+EIFG
Sbjct: 232 KQDFEEIFPDSSIYDPPQEIFG 253
>ref|XP_006591821.1| PREDICTED: uncharacterized protein LOC100306428 isoform X1 [Glycine
max]
Length = 255
Score = 325 bits (833), Expect = 2e-86
Identities = 155/204 (75%), Positives = 177/204 (86%)
Frame = -2
Query: 956 STWRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKI 777
S +R YHDGRPRGPLW+GKKLIGKEALFVI G KRF DDE+KL KF+K HVLRLLK+D I
Sbjct: 50 SCFRQYHDGRPRGPLWKGKKLIGKEALFVISGFKRFNDDEDKLHKFIKTHVLRLLKMDMI 109
Query: 776 AVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRK 597
AVLTEL+RQEQV+LAL MF+V+QK+DWY+PD YLYKDLI++LAR KKMDEV+QLWE MR+
Sbjct: 110 AVLTELERQEQVSLALMMFKVMQKQDWYKPDAYLYKDLIIALARAKKMDEVLQLWESMRE 169
Query: 596 DDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRN 417
++LFPDSQTYTEVIRGFL GSPADAMNIYEDM SP+PPEELPFRI LRN
Sbjct: 170 ENLFPDSQTYTEVIRGFLNYGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLLRN 229
Query: 416 KVKKDFEEIFPESHVYDPPEEIFG 345
KVK+DFEEIFP+S +YDPP+EIFG
Sbjct: 230 KVKQDFEEIFPDSSIYDPPQEIFG 253
>ref|XP_002517255.1| conserved hypothetical protein [Ricinus communis]
gi|223543626|gb|EEF45155.1| conserved hypothetical
protein [Ricinus communis]
Length = 258
Score = 325 bits (833), Expect = 2e-86
Identities = 155/216 (71%), Positives = 181/216 (83%)
Frame = -2
Query: 986 SHRALGGWCGSTWRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNH 807
SH + G R YHDGRPRGPLWRGKKLIGKEALFVILG+KRFKD+EEKLDKF+K H
Sbjct: 48 SHNSFSGL-----RQYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKDEEEKLDKFIKTH 102
Query: 806 VLRLLKLDKIAVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDE 627
VLRLLK+D IAVLTEL+RQE+V+LA K+F++IQK+DWY PDVYLYKDLI++L R KMD+
Sbjct: 103 VLRLLKMDMIAVLTELERQEEVSLATKVFQIIQKQDWYNPDVYLYKDLIIALTRSGKMDQ 162
Query: 626 VMQLWEYMRKDDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXX 447
M+LWE MR ++LFPDSQ YTE+IRGFLR GSP DAMNIYEDM KSP+PPEELPFRI
Sbjct: 163 AMKLWEAMRSENLFPDSQMYTELIRGFLRDGSPGDAMNIYEDMKKSPDPPEELPFRILLK 222
Query: 446 XXXXXXXLRNKVKKDFEEIFPESHVYDPPEEIFGMQ 339
LRN+VK+D+EE+FPE HVYDPPEEIFG++
Sbjct: 223 GLLPHPLLRNRVKQDYEELFPEKHVYDPPEEIFGVR 258
>ref|XP_002314145.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550331008|gb|EEE88100.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 257
Score = 324 bits (831), Expect = 4e-86
Identities = 168/266 (63%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVA--QCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCG 957
M R++SR+K PN +S++ Q LT + + L LS ++ + S G
Sbjct: 1 MLTRALSRSKIPNFSSVIVILQNLTTKQSIIDQT-QLPLSKAS----NIQSFLVPAGL-- 53
Query: 956 STWRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFK-DDEEKLDKFVKNHVLRLLKLDK 780
R YHDGRPRGPLWRGKKLIGKEALFVILG+KRFK DD+EKLD+F+K HV RLLKLD
Sbjct: 54 ---RQYHDGRPRGPLWRGKKLIGKEALFVILGLKRFKNDDDEKLDRFIKTHVFRLLKLDM 110
Query: 779 IAVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMR 600
IAVL+EL+RQE+V+LA+K+FRVIQK+DWY+PDVYLYKDLI++L + KM+E M+LWE MR
Sbjct: 111 IAVLSELERQEEVSLAVKIFRVIQKQDWYKPDVYLYKDLIMALLKTGKMEEAMKLWEDMR 170
Query: 599 KDDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLR 420
+DLFPDSQ YTE IRG+LR GSPADAMNIYEDM KSP+PPEELPFRI LR
Sbjct: 171 NEDLFPDSQMYTEAIRGYLRDGSPADAMNIYEDMKKSPDPPEELPFRILLKGLLPHPLLR 230
Query: 419 NKVKKDFEEIFPESHVYDPPEEIFGM 342
N+VK+D+EE+FPE HVYDPPEEIFG+
Sbjct: 231 NRVKQDYEELFPEKHVYDPPEEIFGI 256
>ref|XP_006404445.1| hypothetical protein EUTSA_v10010650mg [Eutrema salsugineum]
gi|557105564|gb|ESQ45898.1| hypothetical protein
EUTSA_v10010650mg [Eutrema salsugineum]
Length = 257
Score = 324 bits (830), Expect = 5e-86
Identities = 165/262 (62%), Positives = 196/262 (74%)
Frame = -2
Query: 1130 MFARSISRTKFPNCASIVAQCLTKTLAAAEPAGTLALSWSAIGEPQVDSHRALGGWCGST 951
M A + KFP ASI Q LT+ +S+S + +P+ H
Sbjct: 1 MVAIRVLSRKFPTFASIFFQNLTRNPTIHR------ISFSYLIKPKT-LHPVSPKPFTVF 53
Query: 950 WRLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAV 771
+HDGRPRGPLWRGKKLIGKEALFVILG+KR K+D+EKLDKF+K HV RLLKLD +AV
Sbjct: 54 AAQFHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAV 113
Query: 770 LTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDD 591
+ EL+RQE+ ALA+KMF VIQK++WY+PDV++YKDLIVSLA+ K+MDE M LWE M+K++
Sbjct: 114 IGELERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMGLWEKMKKEN 173
Query: 590 LFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKV 411
LFPDSQTYTEVIRGFLR G PADAMN+YEDMLKSP+PPEELPFR+ LRNKV
Sbjct: 174 LFPDSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKV 233
Query: 410 KKDFEEIFPESHVYDPPEEIFG 345
KKDFEE+FPE H YDPPEEIFG
Sbjct: 234 KKDFEELFPEKHAYDPPEEIFG 255
>ref|NP_190271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75266318|sp|Q9STF9.1|PP266_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g46870 gi|545719887|pdb|4LEU|A Chain A, Crystal
Structure Of Tha8-like Protein From Arabidopsis Thaliana
gi|5541672|emb|CAB51178.1| putative protein [Arabidopsis
thaliana] gi|26450732|dbj|BAC42475.1| unknown protein
[Arabidopsis thaliana] gi|28950815|gb|AAO63331.1|
At3g46870 [Arabidopsis thaliana]
gi|332644692|gb|AEE78213.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 257
Score = 323 bits (829), Expect = 7e-86
Identities = 150/199 (75%), Positives = 174/199 (87%)
Frame = -2
Query: 941 YHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAVLTE 762
+HDGRPRGPLWRGKKLIGKEALFVILG+KR K+D+EKLDKF+K HV RLLKLD +AV+ E
Sbjct: 57 FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLDKFIKTHVFRLLKLDMLAVIGE 116
Query: 761 LQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDDLFP 582
L+RQE+ ALA+KMF VIQK++WY+PDV++YKDLIVSLA+ K+MDE M LWE M+K++LFP
Sbjct: 117 LERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFP 176
Query: 581 DSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKVKKD 402
DSQTYTEVIRGFLR G PADAMN+YEDMLKSP+PPEELPFR+ LRNKVKKD
Sbjct: 177 DSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKD 236
Query: 401 FEEIFPESHVYDPPEEIFG 345
FEE+FPE H YDPPEEIFG
Sbjct: 237 FEELFPEKHAYDPPEEIFG 255
>ref|XP_004247885.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Solanum lycopersicum]
Length = 256
Score = 323 bits (828), Expect = 9e-86
Identities = 157/232 (67%), Positives = 184/232 (79%), Gaps = 12/232 (5%)
Frame = -2
Query: 998 PQVDSHRALGGWCGSTW------------RLYHDGRPRGPLWRGKKLIGKEALFVILGMK 855
P + S C +W R YHDGRPRG LWRGKKLIGKEALFVILG++
Sbjct: 25 PSISSTLTSSSSCSPSWVPEFSRSSVRDVRWYHDGRPRGSLWRGKKLIGKEALFVILGLR 84
Query: 854 RFKDDEEKLDKFVKNHVLRLLKLDKIAVLTELQRQEQVALALKMFRVIQKEDWYEPDVYL 675
RFKDDEEKLDKFVK HVLRLLK+D IAVL EL+RQE+V+LA+K+F VIQK+ WY+PDVYL
Sbjct: 85 RFKDDEEKLDKFVKTHVLRLLKMDMIAVLNELERQEEVSLAVKVFWVIQKQAWYQPDVYL 144
Query: 674 YKDLIVSLARCKKMDEVMQLWEYMRKDDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDML 495
YKDLI++LAR +KMD+ M+LWE MRK+DLFPD QT+TEVIRGFLR GSPADAMNI+EDM
Sbjct: 145 YKDLIIALARRRKMDDAMKLWESMRKEDLFPDCQTFTEVIRGFLRDGSPADAMNIFEDMK 204
Query: 494 KSPEPPEELPFRIXXXXXXXXXXLRNKVKKDFEEIFPESHVYDPPEEIFGMQ 339
KSP PPEELPFR+ LRN+VK+DFEEIFP+ H+YDPPEEIFG++
Sbjct: 205 KSPYPPEELPFRVLLKGLLPHPLLRNRVKQDFEEIFPDRHIYDPPEEIFGLR 256
>ref|XP_002875809.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321647|gb|EFH52068.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 257
Score = 323 bits (827), Expect = 1e-85
Identities = 150/199 (75%), Positives = 173/199 (86%)
Frame = -2
Query: 941 YHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAVLTE 762
+HDGRPRGPLWRGKKLIGKEALFVILG+KR KDD+EKL KF+K HV RLLKLD +AV+ E
Sbjct: 57 FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKDDDEKLQKFIKTHVFRLLKLDMLAVIGE 116
Query: 761 LQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDDLFP 582
L+RQE+ ALA+KMF VIQK++WY+PDV++YKDLIVSLA+ K+MDE M LWE M+K++LFP
Sbjct: 117 LERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFP 176
Query: 581 DSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKVKKD 402
DSQTYTEVIRGFLR G PADAMN+YEDMLKSP+PPEELPFR+ LRNKVKKD
Sbjct: 177 DSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKD 236
Query: 401 FEEIFPESHVYDPPEEIFG 345
FEE+FPE H YDPPEEIFG
Sbjct: 237 FEELFPEKHAYDPPEEIFG 255
>ref|XP_006291711.1| hypothetical protein CARUB_v10017876mg [Capsella rubella]
gi|565467664|ref|XP_006291712.1| hypothetical protein
CARUB_v10017876mg [Capsella rubella]
gi|482560418|gb|EOA24609.1| hypothetical protein
CARUB_v10017876mg [Capsella rubella]
gi|482560419|gb|EOA24610.1| hypothetical protein
CARUB_v10017876mg [Capsella rubella]
Length = 257
Score = 322 bits (826), Expect = 1e-85
Identities = 150/199 (75%), Positives = 174/199 (87%)
Frame = -2
Query: 941 YHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLDKIAVLTE 762
+HDGRPRGPLWRGKKLIGKEALFVILG+KR K+D+EKL KF+K HVLRLLKLD +AV+ E
Sbjct: 57 FHDGRPRGPLWRGKKLIGKEALFVILGLKRLKEDDEKLQKFIKTHVLRLLKLDMLAVIGE 116
Query: 761 LQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYMRKDDLFP 582
L+RQE+ ALA+KMF VIQK++WY+PDV++YKDLIVSLA+ K+MDE M LWE M+K++LFP
Sbjct: 117 LERQEETALAIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMGLWEKMKKENLFP 176
Query: 581 DSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXLRNKVKKD 402
DSQTYTEVIRGFLR G PADAMN+YEDMLKSP+PPEELPFR+ LRNKVKKD
Sbjct: 177 DSQTYTEVIRGFLRDGCPADAMNVYEDMLKSPDPPEELPFRVLLKGLLPHPLLRNKVKKD 236
Query: 401 FEEIFPESHVYDPPEEIFG 345
FEE+FPE H YDPPEEIFG
Sbjct: 237 FEELFPEKHAYDPPEEIFG 255
>ref|XP_004507153.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g46870-like [Cicer arietinum]
Length = 261
Score = 317 bits (812), Expect = 6e-84
Identities = 151/206 (73%), Positives = 178/206 (86%), Gaps = 2/206 (0%)
Frame = -2
Query: 956 STW--RLYHDGRPRGPLWRGKKLIGKEALFVILGMKRFKDDEEKLDKFVKNHVLRLLKLD 783
S W R YHDGRPRGPLWRGKKLIGKEALFVI G+KRFKD+E+ L KF+K HVLRLLK+D
Sbjct: 54 SVWGFREYHDGRPRGPLWRGKKLIGKEALFVISGLKRFKDEEDTLHKFIKTHVLRLLKMD 113
Query: 782 KIAVLTELQRQEQVALALKMFRVIQKEDWYEPDVYLYKDLIVSLARCKKMDEVMQLWEYM 603
IAVLTEL+RQ++V+LAL +F V+QK+DWY+PD++LYKDLI++LAR K+MD+V+QLWE M
Sbjct: 114 LIAVLTELERQQEVSLALMVFNVMQKQDWYKPDMFLYKDLIIALARAKRMDDVLQLWESM 173
Query: 602 RKDDLFPDSQTYTEVIRGFLRQGSPADAMNIYEDMLKSPEPPEELPFRIXXXXXXXXXXL 423
RK++LFPDSQTYTEVIRGFL GSPADAMNIYEDM SP+PPEELPFRI L
Sbjct: 174 RKENLFPDSQTYTEVIRGFLSNGSPADAMNIYEDMKNSPDPPEELPFRILLKGLLPHPLL 233
Query: 422 RNKVKKDFEEIFPESHVYDPPEEIFG 345
RNKVK+DFEEIFP+S +YDPP+EIFG
Sbjct: 234 RNKVKQDFEEIFPDSSIYDPPQEIFG 259