BLASTX nr result
ID: Rheum21_contig00012213
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00012213
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347357.1| PREDICTED: 50S ribosomal protein L29, chloro... 79 3e-14
ref|XP_004235356.1| PREDICTED: 50S ribosomal protein L29, chloro... 79 4e-14
ref|XP_004241462.1| PREDICTED: 50S ribosomal protein L29, chloro... 79 7e-14
ref|NP_001104944.1| 50S ribosomal protein L29, chloroplastic pre... 80 2e-13
gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis] 80 2e-13
gb|ACF78845.1| unknown [Zea mays] 80 2e-13
ref|XP_006428206.1| hypothetical protein CICLE_v10026623mg [Citr... 80 3e-13
gb|EOX92100.1| Ribosomal L29 family protein [Theobroma cacao] 79 3e-13
ref|XP_002864947.1| hypothetical protein ARALYDRAFT_919853 [Arab... 76 5e-13
ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloro... 79 5e-13
ref|NP_201325.1| 50S ribosomal protein L29 [Arabidopsis thaliana... 75 6e-13
ref|XP_002454251.1| hypothetical protein SORBIDRAFT_04g027550 [S... 79 8e-13
ref|NP_001150668.1| 50S ribosomal protein L29 [Zea mays] gi|1956... 79 8e-13
ref|XP_006363985.1| PREDICTED: 50S ribosomal protein L29, chloro... 77 1e-12
ref|XP_006281202.1| hypothetical protein CARUB_v10027240mg [Caps... 74 1e-12
ref|XP_002310561.2| hypothetical protein POPTR_0007s05380g [Popu... 78 1e-12
ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloro... 77 2e-12
ref|XP_004953958.1| PREDICTED: 50S ribosomal protein L29, chloro... 77 2e-12
gb|AFW73492.1| 50S ribosomal protein L29 [Zea mays] 77 2e-12
ref|XP_004288191.1| PREDICTED: 50S ribosomal protein L29, chloro... 77 3e-12
>ref|XP_006347357.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Solanum
tuberosum]
Length = 168
Score = 79.3 bits (194), Expect(2) = 3e-14
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +1
Query: 160 KTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
KTT+EL EEI+DLKGELF+LRLQ+SAR +FK+SEF RMRKRIARMLTV
Sbjct: 70 KTTEELQEEIVDLKGELFMLRLQRSARNEFKSSEFLRMRKRIARMLTV 117
Score = 24.6 bits (52), Expect(2) = 3e-14
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 6 NPSHPKLTAS-TLTKSSFHGIRI 71
+PS T+ L+KSSFHGIRI
Sbjct: 12 SPSGVTFTSKINLSKSSFHGIRI 34
>ref|XP_004235356.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Solanum
lycopersicum]
Length = 168
Score = 79.3 bits (194), Expect(2) = 4e-14
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +1
Query: 160 KTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
KTT+EL EEI+DLKGELF+LRLQ+SAR +FK+SEF RMRKRIARMLTV
Sbjct: 71 KTTEELQEEIVDLKGELFMLRLQRSARNEFKSSEFLRMRKRIARMLTV 118
Score = 23.9 bits (50), Expect(2) = 4e-14
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3
Query: 39 LTKSSFHGIRI 71
L+KSSFHG+RI
Sbjct: 21 LSKSSFHGVRI 31
>ref|XP_004241462.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Solanum
lycopersicum]
Length = 164
Score = 79.3 bits (194), Expect(2) = 7e-14
Identities = 39/48 (81%), Positives = 45/48 (93%)
Frame = +1
Query: 160 KTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
KTT+EL EEI+DLKGELF+LRLQ+SAR +FK+SEF RMRKRIARMLTV
Sbjct: 66 KTTEELQEEIVDLKGELFMLRLQRSARNEFKSSEFLRMRKRIARMLTV 113
Score = 23.1 bits (48), Expect(2) = 7e-14
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +3
Query: 6 NPSHPKLTAS-TLTKSSFHGIRI 71
+PS T+ L+KSSFHGI+I
Sbjct: 8 SPSGVTFTSKMNLSKSSFHGIQI 30
>ref|NP_001104944.1| 50S ribosomal protein L29, chloroplastic precursor [Zea mays]
gi|46397055|sp|Q9SWI6.1|RK29_MAIZE RecName: Full=50S
ribosomal protein L29, chloroplastic; AltName:
Full=CL29; Flags: Precursor
gi|5739218|gb|AAD50383.1|AF147725_1 ribosomal protein
L29 [Zea mays] gi|194708704|gb|ACF88436.1| unknown [Zea
mays] gi|413924504|gb|AFW64436.1| 50S ribosomal protein
L29, Precursor [Zea mays]
Length = 161
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 85 VTTLPADRSPAEL---RRHRLXXXXXXAKTTDELHEEIIDLKGELFVLRLQKSARADFKN 255
V + PA+R A + + A TT+++ EE++DLKGELF+LRL++SAR +FKN
Sbjct: 46 VASQPAERRAAAMVAMAKREQELEEIRAMTTEQMEEEVVDLKGELFLLRLKRSARQEFKN 105
Query: 256 SEFSRMRKRIARMLTV 303
SEFSRMRKRIARMLTV
Sbjct: 106 SEFSRMRKRIARMLTV 121
>gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]
Length = 178
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/48 (81%), Positives = 46/48 (95%)
Frame = +1
Query: 160 KTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
KTT+E++EEI+DLKGELF+LRLQKSAR +FK+SEF RMRKRIARMLTV
Sbjct: 75 KTTEEINEEIVDLKGELFMLRLQKSARNEFKSSEFRRMRKRIARMLTV 122
>gb|ACF78845.1| unknown [Zea mays]
Length = 132
Score = 80.5 bits (197), Expect = 2e-13
Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 3/76 (3%)
Frame = +1
Query: 85 VTTLPADRSPAEL---RRHRLXXXXXXAKTTDELHEEIIDLKGELFVLRLQKSARADFKN 255
V + PA+R A + + A TT+++ EE++DLKGELF+LRL++SAR +FKN
Sbjct: 46 VASQPAERRAAAMVAMAKREQELEEIRAMTTEQMEEEVVDLKGELFLLRLKRSARQEFKN 105
Query: 256 SEFSRMRKRIARMLTV 303
SEFSRMRKRIARMLTV
Sbjct: 106 SEFSRMRKRIARMLTV 121
>ref|XP_006428206.1| hypothetical protein CICLE_v10026623mg [Citrus clementina]
gi|568819405|ref|XP_006464243.1| PREDICTED: 50S
ribosomal protein L29, chloroplastic-like [Citrus
sinensis] gi|557530196|gb|ESR41446.1| hypothetical
protein CICLE_v10026623mg [Citrus clementina]
Length = 171
Score = 80.1 bits (196), Expect = 3e-13
Identities = 45/96 (46%), Positives = 62/96 (64%)
Frame = +1
Query: 16 IQSSPPLRSPNHPSMXXXXXXXXVTTLPADRSPAELRRHRLXXXXXXAKTTDELHEEIID 195
I+ S P+R+P + T + + E++ R AKTT+E++EE++D
Sbjct: 33 IRQSWPIRTPLRFATSSSGSRGSSTVVMMAKREEEMKEIR-------AKTTEEINEEVVD 85
Query: 196 LKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
LKGELF+LRLQKS R +FK+SEF RMR+RIARMLTV
Sbjct: 86 LKGELFMLRLQKSVRNEFKSSEFRRMRRRIARMLTV 121
>gb|EOX92100.1| Ribosomal L29 family protein [Theobroma cacao]
Length = 219
Score = 78.6 bits (192), Expect(2) = 3e-13
Identities = 37/49 (75%), Positives = 46/49 (93%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
AKTT+E++EE+++LKGELF+LRLQKS R +FK+SEF RMRKRIARMLTV
Sbjct: 120 AKTTEEINEEVVELKGELFMLRLQKSVRNEFKSSEFRRMRKRIARMLTV 168
Score = 21.6 bits (44), Expect(2) = 3e-13
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 9 PSHPKLTASTLTKSSFHGIRI 71
P PK S++ K+SF+G+RI
Sbjct: 64 PPKPK---SSIPKTSFNGVRI 81
>ref|XP_002864947.1| hypothetical protein ARALYDRAFT_919853 [Arabidopsis lyrata subsp.
lyrata] gi|297310782|gb|EFH41206.1| hypothetical protein
ARALYDRAFT_919853 [Arabidopsis lyrata subsp. lyrata]
Length = 172
Score = 75.9 bits (185), Expect(2) = 5e-13
Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +1
Query: 91 TLPADRSPAE--LRRHRLXXXXXXAKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEF 264
T+ + R P+ + + +KTT++L EE++DLKGELF+LRLQKSAR +FK+S+F
Sbjct: 47 TISSSRKPSVVMMSKREAELKEIRSKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDF 106
Query: 265 SRMRKRIARMLTV 303
RM+K++ARMLTV
Sbjct: 107 RRMKKQVARMLTV 119
Score = 23.9 bits (50), Expect(2) = 5e-13
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 30 ASTLTKSSFHGIRI 71
++T T SSFHG+RI
Sbjct: 21 SATSTSSSFHGVRI 34
>ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Vitis
vinifera]
Length = 161
Score = 79.3 bits (194), Expect = 5e-13
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Frame = +1
Query: 28 PPLRSPNHPSMXXXXXXXXVTTLPADRSPAE------LRRHRLXXXXXXAKTTDELHEEI 189
PP + P P+ RSP+ + + AKTT+EL+EEI
Sbjct: 15 PPKTTSTFPKSSFNGIRIPTPNKPSFRSPSSSSSVVMMAKREEELKEIRAKTTEELNEEI 74
Query: 190 IDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
+DLKGEL +LRLQKS R +FK SEF RMRKR+ARMLTV
Sbjct: 75 VDLKGELLMLRLQKSVRNEFKPSEFGRMRKRVARMLTV 112
>ref|NP_201325.1| 50S ribosomal protein L29 [Arabidopsis thaliana]
gi|46397023|sp|Q9FJP3.1|RK29_ARATH RecName: Full=50S
ribosomal protein L29, chloroplastic; AltName:
Full=CL29; Flags: Precursor gi|189096148|pdb|3BBO|Z
Chain Z, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
Chlororibosome gi|10178184|dbj|BAB11658.1| 50S ribosomal
protein L29 [Arabidopsis thaliana]
gi|15028327|gb|AAK76640.1| putative 50S ribosomal
protein L29 [Arabidopsis thaliana]
gi|19310703|gb|AAL85082.1| putative 50S ribosomal
protein L29 [Arabidopsis thaliana]
gi|21553790|gb|AAM62883.1| 50S ribosomal protein L29
[Arabidopsis thaliana] gi|222424203|dbj|BAH20060.1|
AT5G65220 [Arabidopsis thaliana]
gi|332010642|gb|AED98025.1| 50S ribosomal protein L29
[Arabidopsis thaliana]
Length = 173
Score = 75.5 bits (184), Expect(2) = 6e-13
Identities = 34/49 (69%), Positives = 46/49 (93%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
+KTT++L EE++DLKGELF+LRLQKSAR +FK+S+F RM+K++ARMLTV
Sbjct: 72 SKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDFRRMKKQVARMLTV 120
Score = 23.9 bits (50), Expect(2) = 6e-13
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 30 ASTLTKSSFHGIRI 71
++T T SSFHG+RI
Sbjct: 21 SATSTSSSFHGVRI 34
>ref|XP_002454251.1| hypothetical protein SORBIDRAFT_04g027550 [Sorghum bicolor]
gi|241934082|gb|EES07227.1| hypothetical protein
SORBIDRAFT_04g027550 [Sorghum bicolor]
Length = 161
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
A TT++L EE++DLKGELF+LRL++SAR +FKNSEF RMRKRIARMLTV
Sbjct: 73 AMTTEQLEEEVVDLKGELFLLRLKRSARQEFKNSEFGRMRKRIARMLTV 121
>ref|NP_001150668.1| 50S ribosomal protein L29 [Zea mays] gi|195640946|gb|ACG39941.1|
50S ribosomal protein L29 [Zea mays]
Length = 161
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
A TT++L EE++DLKGELF+LRL++SAR +FKNSEF RMRKRIARMLTV
Sbjct: 73 AMTTEQLEEEVVDLKGELFLLRLKRSARQEFKNSEFGRMRKRIARMLTV 121
>ref|XP_006363985.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Solanum
tuberosum]
Length = 167
Score = 77.0 bits (188), Expect(2) = 1e-12
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +1
Query: 160 KTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
KTT+EL EEI+DLKGELF+LRLQ+SAR +FK+SEF RMRK IARMLTV
Sbjct: 70 KTTEELQEEIVDLKGELFMLRLQRSARNEFKSSEFLRMRKMIARMLTV 117
Score = 21.6 bits (44), Expect(2) = 1e-12
Identities = 8/11 (72%), Positives = 11/11 (100%)
Frame = +3
Query: 39 LTKSSFHGIRI 71
L+KSSF+G+RI
Sbjct: 20 LSKSSFYGVRI 30
>ref|XP_006281202.1| hypothetical protein CARUB_v10027240mg [Capsella rubella]
gi|482549906|gb|EOA14100.1| hypothetical protein
CARUB_v10027240mg [Capsella rubella]
Length = 173
Score = 74.3 bits (181), Expect(2) = 1e-12
Identities = 33/49 (67%), Positives = 46/49 (93%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
+KTT++L EE++DLKGELF+LRLQKSAR +FK+S+F +M+K++ARMLTV
Sbjct: 72 SKTTEQLQEEVVDLKGELFMLRLQKSARNEFKSSDFRKMKKQVARMLTV 120
Score = 23.9 bits (50), Expect(2) = 1e-12
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 30 ASTLTKSSFHGIRI 71
++T T SSFHG+RI
Sbjct: 21 SATSTSSSFHGVRI 34
>ref|XP_002310561.2| hypothetical protein POPTR_0007s05380g [Populus trichocarpa]
gi|550334178|gb|EEE91011.2| hypothetical protein
POPTR_0007s05380g [Populus trichocarpa]
Length = 160
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/49 (75%), Positives = 45/49 (91%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
AKTT+E++EE++DLKGEL +LRLQKS R +FK+SEF RMRKRIARMLTV
Sbjct: 62 AKTTEEINEEVVDLKGELLMLRLQKSTRNEFKSSEFRRMRKRIARMLTV 110
>ref|XP_004137190.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Cucumis
sativus] gi|449508367|ref|XP_004163294.1| PREDICTED: 50S
ribosomal protein L29, chloroplastic-like [Cucumis
sativus]
Length = 170
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/49 (75%), Positives = 46/49 (93%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
+KTT+E++EE+IDLKGEL +LRLQKSAR +FK+SEF RMRKRI+RMLTV
Sbjct: 71 SKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRISRMLTV 119
>ref|XP_004953958.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Setaria
italica]
Length = 161
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/47 (76%), Positives = 44/47 (93%)
Frame = +1
Query: 163 TTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
TT++L EE++DLKGELF+LRL++SAR +FKNSEF RMRKRIARMLTV
Sbjct: 75 TTEQLEEEVVDLKGELFLLRLKRSARQEFKNSEFCRMRKRIARMLTV 121
>gb|AFW73492.1| 50S ribosomal protein L29 [Zea mays]
Length = 161
Score = 77.0 bits (188), Expect = 2e-12
Identities = 36/49 (73%), Positives = 45/49 (91%)
Frame = +1
Query: 157 AKTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
A TT++L EE++DLKGELF+LRL++SAR +FKNSEF RMRKRIAR+LTV
Sbjct: 73 AMTTEQLEEEVVDLKGELFLLRLKRSARQEFKNSEFGRMRKRIARILTV 121
>ref|XP_004288191.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 174
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/48 (75%), Positives = 45/48 (93%)
Frame = +1
Query: 160 KTTDELHEEIIDLKGELFVLRLQKSARADFKNSEFSRMRKRIARMLTV 303
KTT+E++EE++DLKGELF+LRLQKSAR +F +SEF RMRKRIAR+LTV
Sbjct: 74 KTTEEINEEVVDLKGELFMLRLQKSARNEFTSSEFRRMRKRIARLLTV 121