BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00012121
         (343 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I sub...    97   3e-18
ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I sub...    95   8e-18
emb|CBI19898.3| unnamed protein product [Vitis vinifera]               93   3e-17
dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]     92   9e-17
ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [A...    89   5e-16
ref|XP_004982002.1| PREDICTED: DNA-directed RNA polymerase I sub...    89   6e-16
gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Ory...    89   8e-16
gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japo...    84   2e-14
ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I sub...    83   3e-14
ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I sub...    83   3e-14
ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 ...    82   6e-14
ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycin...    79   5e-13
ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thalian...    79   8e-13
ref|XP_006435209.1| hypothetical protein CICLE_v10003775mg [Citr...    77   2e-12
ref|XP_002875292.1| transcription factor S-II domain-containing ...    76   4e-12
gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus...    76   5e-12
ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutr...    76   5e-12
ref|XP_006473684.1| PREDICTED: DNA-directed RNA polymerase I sub...    75   9e-12
ref|XP_006473683.1| PREDICTED: DNA-directed RNA polymerase I sub...    75   9e-12
ref|XP_002318989.1| transcription factor S-II domain-containing ...    75   9e-12

>ref|XP_003560798.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
           [Brachypodium distachyon]
          Length = 125

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 44/92 (47%), Positives = 62/92 (67%)
 Frame = +1

Query: 7   KKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHSPV 186
           K+  K I  KET Y ++ EDIRR LK+E F+  +     +VI+QR +V++ C  CGH  +
Sbjct: 35  KRKAKAIEGKETRYAVTDEDIRRELKIEPFVTLESAPKMDVIVQRVVVDETCPKCGHPQL 94

Query: 187 ELADSRQTRSADEGQTIFYECPSCRHKWKENS 282
           E   ++Q R+ADEGQT+FYECP CRH +K N+
Sbjct: 95  EY-HTKQLRAADEGQTVFYECPECRHNFKVNN 125


>ref|XP_006650488.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Oryza
           brachyantha]
          Length = 125

 Score = 95.1 bits (235), Expect = 8e-18
 Identities = 42/91 (46%), Positives = 61/91 (67%)
 Frame = +1

Query: 7   KKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHSPV 186
           K+  KEI  KET Y ++GEDIRR LK++ F+  +  +  E  ++R  +N+ C  CG+  +
Sbjct: 35  KRKTKEIQGKETRYAVTGEDIRRDLKLDPFVVLESTLKDETAVKRATINRLCPECGYHEL 94

Query: 187 ELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
           E   ++Q RSADEGQT+F+EC  CRHK+ EN
Sbjct: 95  EYY-TKQLRSADEGQTVFFECRDCRHKFNEN 124


>emb|CBI19898.3| unnamed protein product [Vitis vinifera]
          Length = 126

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 45/94 (47%), Positives = 57/94 (60%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           KS++ VK+I  +E  YT+S EDIRR L +E F+K DG I+ E   Q       C+ C   
Sbjct: 33  KSRRKVKDISGREIRYTVSAEDIRRELNIEPFVKLDGIITEESEAQNAKTKGRCDRCEED 92

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKENS 282
                 +RQ RSADEGQTIFYEC  C HKW +N+
Sbjct: 93  TWLYYYTRQLRSADEGQTIFYECTKCGHKWSQNT 126


>dbj|BAJ91866.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 125

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/92 (44%), Positives = 60/92 (65%)
 Frame = +1

Query: 7   KKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHSPV 186
           K+  K+I  KET Y ++ EDIRR LK++ F+  +   + ++++QR L  + C  C H  +
Sbjct: 35  KRKAKDIEGKETRYAVTAEDIRRELKIKPFVVLESAPNLDIVVQRSLTERACPKCNHHEL 94

Query: 187 ELADSRQTRSADEGQTIFYECPSCRHKWKENS 282
           E   ++Q RSADEGQTIFYECP C H + EN+
Sbjct: 95  EYY-TKQLRSADEGQTIFYECPECGHAFNENT 125


>ref|XP_006837385.1| hypothetical protein AMTR_s00111p00127690 [Amborella trichopoda]
           gi|548840003|gb|ERN00239.1| hypothetical protein
           AMTR_s00111p00127690 [Amborella trichopoda]
          Length = 102

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVI-IQRQLVNQPCENCGH 177
           K   +V E+  +E  YTI+ ED+RR L +E F++ D D   E   +QR +VN+PC  C +
Sbjct: 9   KPNHDVSELAGREICYTITAEDLRRDLNLEPFVQLDKDTREEDKGVQRTVVNEPCPKCLN 68

Query: 178 SPVELADSRQTRSADEGQTIFYECPSCRHKWKENS 282
             +E   ++Q RSADEGQT+FY+CP CRHK+  N+
Sbjct: 69  PQLEY-HTKQLRSADEGQTVFYDCPKCRHKFSVNT 102


>ref|XP_004982002.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like
           [Setaria italica]
          Length = 123

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 42/86 (48%), Positives = 54/86 (62%)
 Frame = +1

Query: 7   KKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHSPV 186
           K+  KEI  KET YT++ EDIRR LK+E F+  +     EV+++R    +PC  C H P+
Sbjct: 35  KRKAKEIEGKETRYTVTAEDIRRELKIEPFVTLESAPMQEVVVRRPKTRRPCPECNH-PI 93

Query: 187 ELADSRQTRSADEGQTIFYECPSCRH 264
               SRQ RSADEG+T FYEC  C H
Sbjct: 94  AEYYSRQMRSADEGETTFYECMKCHH 119


>gb|AAK18841.1|AC082645_11 putative RNA polymerase I subunit [Oryza sativa Japonica Group]
           gi|108710721|gb|ABF98516.1| Transcription factor S-II
           family protein, expressed [Oryza sativa Japonica Group]
          Length = 126

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 41/92 (44%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
 Frame = +1

Query: 7   KKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGE-VIIQRQLVNQPCENCGHSP 183
           K+  K+I  KET YT++ EDIRR LK++ ++  +  +  E VI++R  VN+ CE C +  
Sbjct: 35  KRKAKDIEGKETRYTVTAEDIRRELKLDPYVILETTLKEEDVIVERATVNKECEKCKNPE 94

Query: 184 VELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
           ++   ++Q RSADEGQT+FY+C +CRH++ EN
Sbjct: 95  LQYY-TKQLRSADEGQTVFYKCANCRHEFNEN 125


>gb|EAZ28342.1| hypothetical protein OsJ_12319 [Oryza sativa Japonica Group]
           gi|218193626|gb|EEC76053.1| hypothetical protein
           OsI_13248 [Oryza sativa Indica Group]
          Length = 156

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = +1

Query: 22  EIVDKETSYTISGEDIRRALKMEAFIKFDGDISGE-VIIQRQLVNQPCENCGHSPVELAD 198
           +I  KET YT++ EDIRR LK++ ++  +  +  E VI++R  VN+ CE C +  ++   
Sbjct: 70  DIEGKETRYTVTAEDIRRELKLDPYVILETTLKEEDVIVERATVNKECEKCKNPELQYY- 128

Query: 199 SRQTRSADEGQTIFYECPSCRHKWKEN 279
           ++Q RSADEGQT+FY+C +CRH++ EN
Sbjct: 129 TKQLRSADEGQTVFYKCANCRHEFNEN 155


>ref|XP_004512027.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cicer
           arietinum]
          Length = 116

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/93 (48%), Positives = 56/93 (60%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K+K+N+K I  KE SYTIS EDIRR L +        D+  E  +Q   VN+ CE CGH 
Sbjct: 33  KTKQNIKHIKGKEISYTISAEDIRRELGI--------DLIEEQKVQLSKVNKTCEKCGHG 84

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
                 +RQ RSADEGQT FY C  C H+++EN
Sbjct: 85  EATFY-TRQMRSADEGQTTFYTCTRCGHQFQEN 116


>ref|XP_004501608.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           X1 [Cicer arietinum] gi|502132990|ref|XP_004501609.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           RPA12-like isoform X2 [Cicer arietinum]
           gi|502132992|ref|XP_004501610.1| PREDICTED: DNA-directed
           RNA polymerase I subunit RPA12-like isoform X3 [Cicer
           arietinum]
          Length = 116

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/93 (47%), Positives = 57/93 (61%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K++KN+++I  KE SYTIS EDIRR L +        D+  E  +Q   VN+ CE CGH 
Sbjct: 33  KTRKNIRDIKGKEISYTISAEDIRRELGI--------DLIEEQKVQLSKVNKTCEKCGHG 84

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
                 +RQ RSADEGQT FY C  C H+++EN
Sbjct: 85  EATFY-TRQMRSADEGQTTFYTCTRCGHQFQEN 116


>ref|XP_003603103.1| DNA-directed RNA polymerase I subunit RPA12 [Medicago truncatula]
           gi|357470681|ref|XP_003605625.1| DNA-directed RNA
           polymerase I subunit RPA12 [Medicago truncatula]
           gi|355492151|gb|AES73354.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
           gi|355506680|gb|AES87822.1| DNA-directed RNA polymerase
           I subunit RPA12 [Medicago truncatula]
          Length = 115

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 45/93 (48%), Positives = 56/93 (60%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K+K N+K+I  KE SYTIS EDIRR L +        D+  E  +Q   VN+ CE CGH 
Sbjct: 32  KTKCNIKDIKGKEISYTISAEDIRRELGI--------DLIEEQKVQLSKVNKTCEKCGHG 83

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
                 +RQ RSADEGQT FY C  C H+++EN
Sbjct: 84  EAAFY-TRQMRSADEGQTTFYTCTRCGHQFQEN 115


>ref|NP_001236766.1| uncharacterized protein LOC100527489 [Glycine max]
           gi|255632466|gb|ACU16583.1| unknown [Glycine max]
          Length = 116

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/93 (44%), Positives = 57/93 (61%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K+++++++I DKE S+TIS EDIRR L ME        I    +++   V++ CE CGH 
Sbjct: 32  KTRRDIQDICDKEISFTISDEDIRRELGMEI-------IEEHAVMEYSKVSKKCEKCGHG 84

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
                 +RQ RSADEGQT FY C  C H+ +EN
Sbjct: 85  EATYY-TRQMRSADEGQTTFYTCTGCGHQSQEN 116


>ref|NP_566786.1| TFIIB zinc-binding protein [Arabidopsis thaliana]
           gi|9279599|dbj|BAB01057.1| unnamed protein product
           [Arabidopsis thaliana] gi|21536551|gb|AAM60883.1|
           putative RNA polymerase I subunit [Arabidopsis thaliana]
           gi|88011125|gb|ABD38906.1| At3g25940 [Arabidopsis
           thaliana] gi|332643572|gb|AEE77093.1| TFIIB zinc-binding
           protein [Arabidopsis thaliana]
          Length = 119

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/92 (42%), Positives = 57/92 (61%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K+ +N K+I+DKE +YT+S EDIRR L +  F +       +   +   + + CE C H 
Sbjct: 33  KTTRNAKDIIDKEIAYTVSAEDIRRELGISLFGE-----KTQAEAELPKIKKACEKCQH- 86

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKE 276
           P  +  +RQTRSADEGQT +Y CP+C H++ E
Sbjct: 87  PELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>ref|XP_006435209.1| hypothetical protein CICLE_v10003775mg [Citrus clementina]
           gi|557537331|gb|ESR48449.1| hypothetical protein
           CICLE_v10003775mg [Citrus clementina]
          Length = 120

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/93 (43%), Positives = 59/93 (63%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K KKNV+++ D+E SY ++ E+I+R L +  F +  GD  GE  + +  V + CE C  +
Sbjct: 32  KFKKNVQDVADREISYAVTAEEIKRELGISLFEQPQGD-KGETQLSK--VKRACEKC-QN 87

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
           P     +RQTRSADEGQT +Y CP C H+ +E+
Sbjct: 88  PEMYYSTRQTRSADEGQTTYYICPRCGHRCQES 120


>ref|XP_002875292.1| transcription factor S-II domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297321130|gb|EFH51551.1|
           transcription factor S-II domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 119

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/92 (42%), Positives = 59/92 (64%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K+ +N KEI++K+ +YT++ EDIRR L +  F    G+ + E   +   + + CE C H 
Sbjct: 33  KTTRNAKEIINKDIAYTVTAEDIRRELGISLF----GEKTQEEA-ELPKIKKACEKCQH- 86

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKE 276
           P  +  +RQTRSADEGQT +Y CP+C H++ E
Sbjct: 87  PELVYTTRQTRSADEGQTTYYTCPNCAHRFTE 118


>gb|ESW34724.1| hypothetical protein PHAVU_001G175600g [Phaseolus vulgaris]
          Length = 115

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 42/93 (45%), Positives = 54/93 (58%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K+ +++++I DKE  YTI  EDIRR L +E        I  E  +Q   VN+ CE CGH 
Sbjct: 32  KTLRDIQDIRDKEIGYTIYAEDIRRELGIE--------IIEEQKVQLSKVNKKCEKCGHD 83

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
                 +RQ RSADEGQT FY C  C H+ +EN
Sbjct: 84  EANFY-TRQMRSADEGQTTFYTCTRCGHQSQEN 115


>ref|XP_006390663.1| hypothetical protein EUTSA_v10019327mg [Eutrema salsugineum]
           gi|557087097|gb|ESQ27949.1| hypothetical protein
           EUTSA_v10019327mg [Eutrema salsugineum]
          Length = 119

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 40/92 (43%), Positives = 58/92 (63%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           ++ +N KEI+ KE +YT+S EDIRR L +  F    G+ + E   +   + + CE C H 
Sbjct: 33  QTTRNAKEIIGKEIAYTVSAEDIRRELGISLF----GEKTQEDA-ELPKIKKACEKCQH- 86

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKE 276
           P  +  +RQTRSADEGQT +Y CP+C H++ E
Sbjct: 87  PELVYTTRQTRSADEGQTTYYTCPNCSHRFTE 118


>ref|XP_006473684.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           X2 [Citrus sinensis]
          Length = 120

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/93 (41%), Positives = 59/93 (63%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K KKNV+++ D+E SY ++ E+I+R L +  F +  GD  GE  + +  V + CE C  +
Sbjct: 32  KFKKNVQDVADREISYAVTAEEIKRELGISLFEQPQGD-KGETQLSK--VKRACEKC-QN 87

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
           P     +RQTRSADEGQT +Y CP C ++ +E+
Sbjct: 88  PEMYYSTRQTRSADEGQTTYYICPRCGYRCQES 120


>ref|XP_006473683.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like isoform
           X1 [Citrus sinensis]
          Length = 139

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/93 (41%), Positives = 59/93 (63%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K KKNV+++ D+E SY ++ E+I+R L +  F +  GD  GE  + +  V + CE C  +
Sbjct: 51  KFKKNVQDVADREISYAVTAEEIKRELGISLFEQPQGD-KGETQLSK--VKRACEKC-QN 106

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
           P     +RQTRSADEGQT +Y CP C ++ +E+
Sbjct: 107 PEMYYSTRQTRSADEGQTTYYICPRCGYRCQES 139


>ref|XP_002318989.1| transcription factor S-II domain-containing family protein [Populus
           trichocarpa] gi|222857365|gb|EEE94912.1| transcription
           factor S-II domain-containing family protein [Populus
           trichocarpa]
          Length = 117

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/93 (38%), Positives = 59/93 (63%)
 Frame = +1

Query: 1   KSKKNVKEIVDKETSYTISGEDIRRALKMEAFIKFDGDISGEVIIQRQLVNQPCENCGHS 180
           K KK+ K++ ++E SY +S ED+RR L +  F        G++ ++   +N+ CE CGH+
Sbjct: 33  KFKKSAKDLSEREISYQVSSEDMRRDLGISHF-------EGKMEVKDMEINKKCEKCGHT 85

Query: 181 PVELADSRQTRSADEGQTIFYECPSCRHKWKEN 279
            ++ + +RQ RSADEGQT F+ C +C + + EN
Sbjct: 86  KLKFS-TRQMRSADEGQTTFFHCANCSYTFTEN 117