BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010854
         (1603 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   393   e-106
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603...   366   2e-98
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   363   1e-97
ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267...   362   2e-97
gb|EOY23991.1| DNA-directed RNA polymerase I subunit rpa49, puta...   361   4e-97
gb|EMJ16625.1| hypothetical protein PRUPE_ppa006096mg [Prunus pe...   351   4e-94
gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Moru...   351   6e-94
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616...   346   2e-92
ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citr...   346   2e-92
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   336   2e-89
ref|XP_002339506.1| predicted protein [Populus trichocarpa] gi|5...   336   2e-89
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   333   2e-88
ref|XP_004305732.1| PREDICTED: uncharacterized protein LOC101303...   331   5e-88
ref|XP_006407147.1| hypothetical protein EUTSA_v10020760mg [Eutr...   322   2e-85
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ...   320   8e-85
ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citr...   315   4e-83
ref|XP_004487983.1| PREDICTED: uncharacterized protein LOC101507...   310   9e-82
gb|ESW10773.1| hypothetical protein PHAVU_009G236700g [Phaseolus...   309   2e-81
ref|XP_006297702.1| hypothetical protein CARUB_v10013731mg [Caps...   309   3e-81

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
            vinifera]
          Length = 421

 Score =  393 bits (1010), Expect = e-106
 Identities = 206/388 (53%), Positives = 281/388 (72%), Gaps = 7/388 (1%)
 Frame = +1

Query: 118  MTVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPP-SVRVYRHRARQNRLEVVVSP 294
            + V +E+V E P+K PPLVGYFPS FDP+K +   SDPP +V+V+R++AR NRL++VVSP
Sbjct: 27   VNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP 86

Query: 295  PNPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVS 474
             N S V+FVG ++ GEAA+ ++C+YALGV DKET+ LKIVPI S+K+FRL+P V G   S
Sbjct: 87   -NDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDAS 145

Query: 475  DKTPST----PATVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLD 642
               PS+      T  E   ++R+LTN YGT K+    +K   L  KDD   Q +LD++L 
Sbjct: 146  VDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLK 205

Query: 643  EA-IDKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEE 819
            E  I+K+AL STSA + R+IPP+D  ATTP+ AY LDKIIF G+WDYLLDI +L QA  E
Sbjct: 206  EVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVE 265

Query: 820  ISPKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIP 999
            +   +Y+SFVC+R+ KL  ++ E EK  LACI S++NHL+K+KD+ SMD  +++K ++IP
Sbjct: 266  VESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIP 324

Query: 1000 SIIFQRFSSMF-IDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNL 1176
             I+ Q+FSSMF +DS+  RL++EK  LLISYVLV +L+ D F T P DI++DLRM+   L
Sbjct: 325  GILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKL 384

Query: 1177 KVHFENLGCKYVRRSNTSVATLPVPLQF 1260
            + HFE+LGCK V ++  ++ATLPVPL F
Sbjct: 385  RAHFEHLGCKLVSQNKVTMATLPVPLTF 412


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  391 bits (1005), Expect = e-106
 Identities = 205/384 (53%), Positives = 279/384 (72%), Gaps = 7/384 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPP-SVRVYRHRARQNRLEVVVSPPNPS 306
            +E+V E P+K PPLVGYFPS FDP+K +   SDPP +V+V+R++AR NRL++VVSP N S
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSP-NDS 59

Query: 307  AVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKTP 486
             V+FVG ++ GEAA+ ++C+YALGV DKET+ LKIVPI S+K+FRL+P V G   S   P
Sbjct: 60   KVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEP 119

Query: 487  ST----PATVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA-I 651
            S+      T  E   ++R+LTN YGT K+    +K   L  KDD   Q +LD++L E  I
Sbjct: 120  SSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVVI 179

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
            +K+AL STSA + R+IPP+D  ATTP+ AY LDKIIF G+WDYLLDI +L QA  E+   
Sbjct: 180  NKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESS 239

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
            +Y+SFVC+R+ KL  ++ E EK  LACI S++NHL+K+KD+ SMD  +++K ++IP I+ 
Sbjct: 240  AYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPGILN 298

Query: 1012 QRFSSMF-IDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHF 1188
            Q+FSSMF +DS+  RL++EK  LLISYVLV +L+ D F T P DI++DLRM+   L+ HF
Sbjct: 299  QKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHF 358

Query: 1189 ENLGCKYVRRSNTSVATLPVPLQF 1260
            E+LGCK V ++  ++ATLPVPL F
Sbjct: 359  EHLGCKLVSQNKVTMATLPVPLTF 382


>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
          Length = 431

 Score =  366 bits (939), Expect = 2e-98
 Identities = 188/385 (48%), Positives = 263/385 (68%), Gaps = 5/385 (1%)
 Frame = +1

Query: 121  TVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPN 300
            TV +E + E P+   P+VGYFPS +DP        +  S ++YR+  R NRL++VVSP N
Sbjct: 39   TVTMETIAENPNNISPIVGYFPSGYDPLTNNNDGVEELSTKLYRNAKRNNRLQLVVSP-N 97

Query: 301  PSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDK 480
             S VDFVG  + GEA + ++C+Y+LG+ DKET+ LKIVPI ++K+ RL+P VRGL   + 
Sbjct: 98   GSQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGLEAQET 157

Query: 481  ----TPSTPATVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA 648
                T     T  E  DK+RELT  Y + K  +  +K   LR ++DT +Q E D+ +  A
Sbjct: 158  EDPDTAKQELTAEERNDKMRELTQKYSSKKTIRQARKLDSLRQQEDTGNQEEFDRNIAGA 217

Query: 649  IDKDAL-ASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEIS 825
            I+K+AL  + + ++ R+IPPHDL AT P+ AYPLD+II  G+WD+LLDI+EL +A  E++
Sbjct: 218  INKEALEVAVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEMT 277

Query: 826  PKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSI 1005
            P  Y SFVC+R  KL+ I+ E EKK+LA I SF+ HL+KFKDK+SMDG++++K ++ P I
Sbjct: 278  PDLYPSFVCNRSYKLEHIQDEDEKKRLAGIFSFITHLVKFKDKHSMDGVSSAKHHKFPGI 337

Query: 1006 IFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVH 1185
            + Q+F+SMF  S+  RL +EKV LLI+YVLV +LF D+F + P DI+KDLR+    L+  
Sbjct: 338  LSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDPSDIAKDLRINAVALRPF 397

Query: 1186 FENLGCKYVRRSNTSVATLPVPLQF 1260
            +E LGCK VR  N  +ATLPVPL F
Sbjct: 398  YEYLGCKLVREKNVVLATLPVPLVF 422


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
            gi|449480549|ref|XP_004155927.1| PREDICTED:
            uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  363 bits (931), Expect = 1e-97
 Identities = 195/389 (50%), Positives = 269/389 (69%), Gaps = 7/389 (1%)
 Frame = +1

Query: 115  AMTVNIEMVKEQPDKTPPLVGYFPSAFDPNKKK-KSRSDPPSVRVYRHRARQNRLEVVVS 291
            +M   I+++  QP KTPP+VGYFPS FDP+K   K +S     RVY+H+ R NR+++VVS
Sbjct: 40   SMDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVS 99

Query: 292  PPNPSAVDFVGKTHDGEAAAHKM-CSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGL- 465
            P   S VDFVG  + GEA A K  C+YALGV DK T+ LKIVPI S+ +FRLDP VRG  
Sbjct: 100  PTG-SNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSD 158

Query: 466  VVSDKTPSTPATVAENYDK---IRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQ 636
            V  +++PS         DK   +RELT  YGT K+KK  QK   L+ +DD   + +LD +
Sbjct: 159  VTENESPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGR 218

Query: 637  LDEAI-DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQAD 813
            +   + +K+AL  T AE  R+IP ++  ATTP+ AYPLDKII  G+W +L D++   Q  
Sbjct: 219  MKNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQET 278

Query: 814  EEISPKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYR 993
             EIS  +Y SFV +R+ KL  I+ E EKKKL CI S++ HLIK+KD++SM  ++++K ++
Sbjct: 279  AEISA-TYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHK 337

Query: 994  IPSIIFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPN 1173
            IPS++ Q+FSSMF  +E  RLS +K+ LLIS+VLV SLF D F + P DI+KDLR +  +
Sbjct: 338  IPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYD 397

Query: 1174 LKVHFENLGCKYVRRSNTSVATLPVPLQF 1260
            L++HF+NLGCK++R++N S+ATLP+PLQF
Sbjct: 398  LRLHFDNLGCKFIRKNNLSLATLPIPLQF 426


>ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267531 [Solanum
            lycopersicum]
          Length = 410

 Score =  362 bits (930), Expect = 2e-97
 Identities = 191/385 (49%), Positives = 264/385 (68%), Gaps = 5/385 (1%)
 Frame = +1

Query: 121  TVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPN 300
            TV +E + E P+   P+VGYFPS +DP +      +  S ++YR+  R NRL+VVVSP  
Sbjct: 18   TVTMETIAENPNNISPMVGYFPSGYDPLRNTNDGVEELSTKLYRNVRRNNRLQVVVSPYG 77

Query: 301  PSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDK 480
             S VDFVG  + GEA + ++C+Y+LG+ DKET+ LKIVPI ++K+ RL+P VRG  V D 
Sbjct: 78   -SQVDFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSEVPDA 136

Query: 481  ----TPSTPATVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA 648
                T     T  E  DK+RELT  Y + K+ +  +K   LR ++DT +Q E D+ +  A
Sbjct: 137  EDPDTAKQELTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGA 196

Query: 649  IDKDALASTSA-ETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEIS 825
            I+K+AL  T A ++ R+IPPHDL AT P+ AYPLD+II  G+WD+LLDI+EL +A  E++
Sbjct: 197  INKEALEVTVATDSARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEMT 256

Query: 826  PKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSI 1005
            P  Y SFV +R  KL+ I+ E EKK+LA ILSF+ HL+KFKDK+SMDG++++K ++ P I
Sbjct: 257  PDLYPSFVRNRSYKLEHIQDEDEKKRLAGILSFITHLVKFKDKHSMDGVSSAKHHKFPGI 316

Query: 1006 IFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVH 1185
            + Q+F+SMF  S+  RL +EKV LLI+YVLV +LF D+F + P DI+KDLR+    L+  
Sbjct: 317  LSQKFTSMFSISDSKRLPEEKVTLLINYVLVLTLFADDFRSDPSDIAKDLRINAVALRPF 376

Query: 1186 FENLGCKYVRRSNTSVATLPVPLQF 1260
            +E LGCK VR  N  +ATLPVPL F
Sbjct: 377  YEYLGCKLVREKNIVLATLPVPLVF 401


>gb|EOY23991.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao]
          Length = 457

 Score =  361 bits (927), Expect = 4e-97
 Identities = 192/403 (47%), Positives = 272/403 (67%), Gaps = 24/403 (5%)
 Frame = +1

Query: 124  VNIEMVKEQPDKTPPLVGYFPSAFDPNKKKK-----------------SRSDPPSVRVYR 252
            V I++ ++QP+K PPLV YFPS ++P K                    ++S+ P V+VYR
Sbjct: 45   VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVYR 104

Query: 253  HRARQ--NRLEVVVSPPNPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVS 426
            + A++  NRL+VVVSP   S VDFVG  + GEAAA ++C Y+LGV D+ETR LKI+PI S
Sbjct: 105  NMAQRKTNRLQVVVSPSG-SNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPIAS 163

Query: 427  DKVFRLDPVVRGLVVSDKTPSTPA----TVAENYDKIRELTNTYGTTKAKKGVQKAMQLR 594
            +K+FRL+P VR    ++K  S+      T  +  DK+ ELT  YGT K +K  +    L+
Sbjct: 164  NKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNLK 223

Query: 595  IKDDTTDQPELDKQLDE-AIDKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGD 771
             + D   Q  LD+++++ A +K+AL +TSA   R+IPPHD  ATTP  AYPLDKII  GD
Sbjct: 224  KEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILKGD 283

Query: 772  WDYLLDIWELYQADEEISPKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKD 951
            W++L DI+ L +   E++  +Y +FVC+R+NKL+ I+ E+EK+KL+C+ SF+ HL+KF D
Sbjct: 284  WEFLGDIYGLLEVGAEVASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHLVKFND 343

Query: 952  KYSMDGLATSKTYRIPSIIFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETI 1131
            ++SMD +A++K ++IPSII QRF +MF D    + S +++ LLISYVLV +L  D F T 
Sbjct: 344  QFSMDRVASAKGHKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHADGFRTD 403

Query: 1132 PEDISKDLRMATPNLKVHFENLGCKYVRRSNTSVATLPVPLQF 1260
            P DI+KDLRM++  L+ HFENLGCK VR +N+   TLPVPL+F
Sbjct: 404  PSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKF 446


>gb|EMJ16625.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
          Length = 427

 Score =  351 bits (901), Expect = 4e-94
 Identities = 187/382 (48%), Positives = 260/382 (68%), Gaps = 5/382 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPNPSA 309
            I++V + P+KTPPLVGYFP +FDP K   S S    V ++R   +  RL++VV+P N + 
Sbjct: 38   IQVVPDIPEKTPPLVGYFPCSFDPTKSPYSNST--DVGLFRDSKKPRRLQIVVTP-NGTN 94

Query: 310  VDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKTPS 489
            VDFVG  + GEA   + C++ALGV DK T+ LKI+P+ S+K+FRL P+VRG   S K P 
Sbjct: 95   VDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAKEPE 154

Query: 490  TPA----TVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEAI-D 654
            +      T  E  +K  EL + YGT KA +  +K   L+ +D    Q +LD ++   + +
Sbjct: 155  SSVKEQLTGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLIVPN 214

Query: 655  KDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPKS 834
            K+AL ST ++ +R IPP +  ATTP+ AY LDKII  G+WD L DI+E +Q   E+S  +
Sbjct: 215  KEALESTESQISRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGAEVSWDA 274

Query: 835  YTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIFQ 1014
            +  FVC R++KL  I+ + EK KL+CI S++ HLIKFKD++SMDG+++S+T+RIP+++F 
Sbjct: 275  FPRFVCHRIHKLQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRIPNLLFH 334

Query: 1015 RFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFEN 1194
            +FS+MF  +E   LS+EK  LLISYVLV +LFVD FET   DI+KDLRM+   L+ H+EN
Sbjct: 335  KFSTMF-PTESKGLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHYEN 393

Query: 1195 LGCKYVRRSNTSVATLPVPLQF 1260
            LGCK VR+ N   ATLPVPLQF
Sbjct: 394  LGCKLVRKRNVMFATLPVPLQF 415


>gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
          Length = 438

 Score =  351 bits (900), Expect = 6e-94
 Identities = 183/383 (47%), Positives = 260/383 (67%), Gaps = 6/383 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPNPSA 309
            I++V+ QP++ PPLVGYFPS FDP       S     RV+R+R +  RL++VVSP N + 
Sbjct: 47   IQVVQNQPERAPPLVGYFPSGFDPKDGDDESSATAMARVFRNRNKPKRLQLVVSP-NGAN 105

Query: 310  VDFVGKTHDGEA-AAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKTP 486
            VDFVG  + GEA A  + C+YALGV DKET+ LKIVPI S+K+FRL+P VRGL + +K  
Sbjct: 106  VDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRGLRLPNKDS 165

Query: 487  STPA----TVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDE-AI 651
             + A    +     +KI+ LT+ YGT K+ +  +K   L   DD   Q ++D+++ +  I
Sbjct: 166  GSLAEGERSALSKSEKIKGLTDRYGTNKSIREAKKRDALYQNDDPETQKDMDEKIKQIVI 225

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
             KDAL ST   T R+IPP++  AT+ + AYP++KII  G+WD+L DI+ L Q + E+   
Sbjct: 226  KKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQEEAELKSD 285

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
             Y SF+ +R+  L   + E EKK+ ACI S++ HLIKFKD +SMDG++++K ++ PSI+ 
Sbjct: 286  DYPSFISNRIQNLRETEDEEEKKRRACIFSYITHLIKFKDLHSMDGVSSAKRHKFPSILR 345

Query: 1012 QRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFE 1191
            Q+FS+MF+ SE  +L+ ++  LLISYVLV +L+ D F+T   DI+KDLRM +  L+VH+E
Sbjct: 346  QKFSAMFLSSEVKKLASKENDLLISYVLVLTLYADRFQTNLTDIAKDLRMTSVTLRVHYE 405

Query: 1192 NLGCKYVRRSNTSVATLPVPLQF 1260
             LGCK VR++N   ATLPVPLQF
Sbjct: 406  QLGCKLVRQNNLWFATLPVPLQF 428


>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
          Length = 447

 Score =  346 bits (887), Expect = 2e-92
 Identities = 181/383 (47%), Positives = 259/383 (67%), Gaps = 6/383 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRH----RARQNRLEVVVSPP 297
            ++ + EQP+K PPLVGYFPS + P+         P VRVYR+    + R  R+E+VVSP 
Sbjct: 57   VQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSPR 116

Query: 298  NPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSD 477
            + S+VD+VG ++ GEA A + C YA+GV D+ T+ LKIVPI ++K+FRL+P VRG  V+D
Sbjct: 117  D-SSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSDVAD 175

Query: 478  KTPSTPATVAENYDKIRELTNT-YGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA-I 651
            K        AE    ++ + +T YGT K+ +  +K   L  ++D   Q +L  ++    I
Sbjct: 176  KDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKI 235

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
            +K+AL ST+++T  ++PP+D +ATTP+ AYPLDKII  G+WD++ DI+    A  E+   
Sbjct: 236  NKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEVISD 295

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
            +Y SFVC+R++KL  I+ + EK+ LA I S++ HL+KFKD++SMDG A++K +RIP I+ 
Sbjct: 296  AYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILH 355

Query: 1012 QRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFE 1191
            Q+F + F D+E  RLSD+K+ LLISYVLV +L  D+F T P DI+KDLRM+   L+ HFE
Sbjct: 356  QKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFE 415

Query: 1192 NLGCKYVRRSNTSVATLPVPLQF 1260
             LGCK +R  N   ATLPVPLQF
Sbjct: 416  KLGCKLLREKNMLYATLPVPLQF 438


>ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528587|gb|ESR39837.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 447

 Score =  346 bits (887), Expect = 2e-92
 Identities = 181/383 (47%), Positives = 259/383 (67%), Gaps = 6/383 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRH----RARQNRLEVVVSPP 297
            ++ + EQP+K PPLVGYFPS + P+         P VRVYR+    + R  R+E+VVSP 
Sbjct: 57   VQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSPR 116

Query: 298  NPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSD 477
            + S+VD+VG ++ GEA A + C YA+GV D+ T+ LKIVPI ++K+FRL+P VRG  V+D
Sbjct: 117  D-SSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSDVAD 175

Query: 478  KTPSTPATVAENYDKIRELTNT-YGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA-I 651
            K        AE    ++ + +T YGT K+ +  +K   L  ++D   Q +L  ++    I
Sbjct: 176  KDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKI 235

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
            +K+AL ST+++T  ++PP+D +ATTP+ AYPLDKII  G+WD++ DI+    A  E+   
Sbjct: 236  NKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEVISD 295

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
            +Y SFVC+R++KL  I+ + EK+ LA I S++ HL+KFKD++SMDG A++K +RIP I+ 
Sbjct: 296  AYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILH 355

Query: 1012 QRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFE 1191
            Q+F + F D+E  RLSD+K+ LLISYVLV +L  D+F T P DI+KDLRM+   L+ HFE
Sbjct: 356  QKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFE 415

Query: 1192 NLGCKYVRRSNTSVATLPVPLQF 1260
             LGCK +R  N   ATLPVPLQF
Sbjct: 416  KLGCKLLREKNMLYATLPVPLQF 438


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
            communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
            polymerase I 49 kDa polypeptide, putative [Ricinus
            communis]
          Length = 481

 Score =  336 bits (861), Expect = 2e-89
 Identities = 192/424 (45%), Positives = 266/424 (62%), Gaps = 43/424 (10%)
 Frame = +1

Query: 118  MTVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRS--------------DPPSVRVYRH 255
            + V IE++ +Q DKTPP+VGYFPS + P+K  +S +                PSV+ YR+
Sbjct: 58   LNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYRN 117

Query: 256  RAR----------------QNRLEVVVSPPNPSAVDFVGKTHDGEAAAHKMCSYALGVFD 387
              R                  R+E+VVSP N S VDFVGK++ GEA A ++C+YALGV D
Sbjct: 118  AQRTKIEKSSNERNEKWRSSERMELVVSP-NGSNVDFVGKSYKGEATAAQLCTYALGVLD 176

Query: 388  KETRKLKIVPIVSDKVFRLDPVVRGLVVSDKTPSTPATVAENYDKIRE--------LTNT 543
            K+T+ LKI+PI  +K+FRL+P ++G+  SDK PS    V EN D  +E        LT+T
Sbjct: 177  KKTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPS----VLENEDLSKENMAVRKKTLTDT 232

Query: 544  YGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEAID-----KDALASTSAETTRSIPPH 708
            YGT   KK + +  ++ I     D PE  K LD+ ID     K AL  TSA   R+IPPH
Sbjct: 233  YGT---KKSITQGKRMEIMMQG-DNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPH 288

Query: 709  DLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPKSYTSFVCSRVNKLDLIKAE 888
            +  ATTP+ AYPL +II  G+WDYL D++E+ QA E  +  +Y  FV +R++KL  I+ E
Sbjct: 289  NTSATTPQEAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDE 348

Query: 889  SEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIFQRFSSMFIDSEKSRLSDEK 1068
             E+K  + I S++ HL+KFKD +SMDG++++K ++ PSI+ Q+F  MF   E  +L  EK
Sbjct: 349  VERKTYSRIFSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGMF-TPESRKLPVEK 407

Query: 1069 VGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFENLGCKYVRRSNTSVATLPV 1248
            + LLISYVLV SL+ D+F T P DI+KDLR++   ++ HFENLGCK V  +  S+ATLPV
Sbjct: 408  IDLLISYVLVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPV 467

Query: 1249 PLQF 1260
            PL+F
Sbjct: 468  PLKF 471


>ref|XP_002339506.1| predicted protein [Populus trichocarpa]
            gi|566150007|ref|XP_006369274.1| hypothetical protein
            POPTR_0001s20580g [Populus trichocarpa]
            gi|550347732|gb|ERP65843.1| hypothetical protein
            POPTR_0001s20580g [Populus trichocarpa]
          Length = 472

 Score =  336 bits (861), Expect = 2e-89
 Identities = 182/411 (44%), Positives = 260/411 (63%), Gaps = 30/411 (7%)
 Frame = +1

Query: 118  MTVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSR---------SDPPSVRVYRHRAR-- 264
            + V +E+V  Q DKTPP+VGYFPS ++P+K              + PPSV++YR+  R  
Sbjct: 54   LDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNAQRAK 113

Query: 265  --------------QNRLEVVVSPPNPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRK 402
                            RLE+VVSP N S V+FVG ++ GEA A ++C+YALGV DK T+ 
Sbjct: 114  VEKSSGEKNEKGRTSERLELVVSP-NGSNVEFVGNSYKGEAMAAQLCTYALGVLDKATQT 172

Query: 403  LKIVPIVSDKVFRLDPVVRGLVVSDKTPST----PATVAENYDKIRELTNTYGTTKAKKG 570
            LKI+PI  +K+ RL+P +RG + +DK  +       T  +   +IR+L   YG  K+   
Sbjct: 173  LKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQ 232

Query: 571  VQKAMQLRIKDDTTDQPELDKQLDEA-IDKDALASTSAETTRSIPPHDLHATTPEAAYPL 747
             +K   LR  DD   Q +L ++++ A I+KDAL STS  + R+IPP++  A TP+ AYPL
Sbjct: 233  DKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYPL 292

Query: 748  DKIIFAGDWDYLLDIWELYQADEEISPKSYTSFVCSRVNKLDLIKAESEKKKLACILSFL 927
            D II  G+WD+L DI+++ Q   E++  +Y +FVC+R+ KL  I+ E EKK+L+CI S++
Sbjct: 293  DGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIFSYI 352

Query: 928  NHLIKFKDKYSMDGLATSKTYRIPSIIFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSL 1107
             HL+KFKD++SMDG A+++ ++ PSII Q+F  MF   E  RLS +K+ LLISYVLV +L
Sbjct: 353  THLLKFKDQHSMDGAASARNHQFPSIIRQKFFEMF-KPETRRLSVDKIDLLISYVLVLTL 411

Query: 1108 FVDNFETIPEDISKDLRMATPNLKVHFENLGCKYVRRSNTSVATLPVPLQF 1260
            + D+F T P D+S DLRM    +K H+ NLGCK  R  N  + TL VPL+F
Sbjct: 412  YADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEF 462


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Glycine
            max]
          Length = 424

 Score =  333 bits (853), Expect = 2e-88
 Identities = 184/382 (48%), Positives = 250/382 (65%), Gaps = 3/382 (0%)
 Frame = +1

Query: 124  VNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPNP 303
            V +E+V+E P+KTPP+VGYFPS FDP   K     P + +VYRHR+   RLE+VV PP  
Sbjct: 38   VEVEVVREHPNKTPPVVGYFPSGFDP--VKNHGGGPSNFQVYRHRSMPKRLELVVRPPR- 94

Query: 304  SAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKT 483
            S+V+FVG ++ GEAAA     YALGV DKE   LK+VPI  +K+FRL+P V+G+   +  
Sbjct: 95   SSVEFVGTSYAGEAAARHRAKYALGVLDKEAGTLKVVPIAGNKIFRLEPKVKGVGAFENE 154

Query: 484  PSTPATVAE--NYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELD-KQLDEAID 654
            P+  +T+ E     K  E T+ +GT K  +  +K + LR  +D   Q  LD K     ++
Sbjct: 155  PAN-STLEEMTQQQKFAETTSIWGTKKDIEKAKKKLALRQDEDPDSQRNLDVKMKSVTVN 213

Query: 655  KDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPKS 834
            K AL ST +  +R+IPP+D  ATTP+ AY LDKII  G+WDYL DI+   Q  EE    +
Sbjct: 214  KKALESTESHVSRNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNNLQRGEEADFSA 273

Query: 835  YTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIFQ 1014
            Y +FV +R+ +L  IK ESEKK+L+CI S++NHLIKFKD++S D L ++K ++IP+I+  
Sbjct: 274  YPTFVRNRIERLRKIKDESEKKQLSCIFSYINHLIKFKDQHSFDVL-SAKGHKIPNILRH 332

Query: 1015 RFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFEN 1194
            +FS+MF  SE  RL  EK+ LLI YVLV +LF D F T   DI+KDL M    ++  +E+
Sbjct: 333  KFSNMFAVSESKRLPPEKISLLICYVLVLTLFSDEFRTDYTDIAKDLSMNILPVRQLYEH 392

Query: 1195 LGCKYVRRSNTSVATLPVPLQF 1260
            LGCK  R+ N   ATLPVPL+F
Sbjct: 393  LGCKISRQKNIFYATLPVPLKF 414


>ref|XP_004305732.1| PREDICTED: uncharacterized protein LOC101303149 [Fragaria vesca
            subsp. vesca]
          Length = 425

 Score =  331 bits (849), Expect = 5e-88
 Identities = 175/382 (45%), Positives = 246/382 (64%), Gaps = 5/382 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQN-RLEVVVSPPNPS 306
            I ++   P++ PPLVGYFPS FDP +      D   V V+RH+ R   RL+VVV+P    
Sbjct: 37   IRVIPGNPERIPPLVGYFPSGFDPTQNPDP--DSTKVGVFRHKERGGTRLQVVVTPNKEP 94

Query: 307  AVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKTP 486
             VDFVG ++ GEA A ++CSY LG+ DK T+ LKIVPI S+K+FRL+  ++GL  + K P
Sbjct: 95   KVDFVGTSYAGEAQAGELCSYGLGILDKATQTLKIVPIASNKIFRLEAKIQGLDSAGKEP 154

Query: 487  STPA----TVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEAID 654
            +       +  E   +  EL N YGT K+ +  +K   L+ +DD   Q +LD      ID
Sbjct: 155  AGSGIGELSTLEKAKRRNELHNLYGTKKSIRQNKKMQTLKQEDDPDSQNDLDAIKQGMID 214

Query: 655  KDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPKS 834
            ++   ++     R+ PP +  ATTP  AYPLDKII   +W +L DI++L +   EIS  S
Sbjct: 215  REDTEASEGHKDRNTPPFNASATTPHEAYPLDKIITTEEWKFLQDIYKLSEGGAEISQVS 274

Query: 835  YTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIFQ 1014
            + +FVC+RV+KL LI+ E ++ KL+CI S++ HL+KFKD +SMDG +++K +R PS+I  
Sbjct: 275  FPAFVCNRVHKLQLIEDEDKRNKLSCIFSYITHLVKFKDLHSMDGFSSAKGHRFPSMIKD 334

Query: 1015 RFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFEN 1194
            +FS+MF D+   RLS EK  LLISYVLV +LF D F+T   DI+KDLRM+   L+ H+E 
Sbjct: 335  KFSTMF-DAVSKRLSTEKNNLLISYVLVLTLFADEFQTSMTDIAKDLRMSNATLRTHYET 393

Query: 1195 LGCKYVRRSNTSVATLPVPLQF 1260
            LGCK  ++++ S  TLPVPLQF
Sbjct: 394  LGCKVSKKNDVSTVTLPVPLQF 415


>ref|XP_006407147.1| hypothetical protein EUTSA_v10020760mg [Eutrema salsugineum]
            gi|557108293|gb|ESQ48600.1| hypothetical protein
            EUTSA_v10020760mg [Eutrema salsugineum]
          Length = 436

 Score =  322 bits (826), Expect = 2e-85
 Identities = 167/383 (43%), Positives = 253/383 (66%), Gaps = 2/383 (0%)
 Frame = +1

Query: 118  MTVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRAR-QNRLEVVVSP 294
            M +N++ + E+PD+ PP+V YF S +DP  +   R + P+V VYR++   + RL+VVVSP
Sbjct: 47   MEINVKEISEKPDRVPPIVAYFASGYDPCAQSGER-ESPTVTVYRNKLESKKRLQVVVSP 105

Query: 295  PNPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVS 474
            P  S V+FVG  + GE AA + C Y LGV DKET+ L+I+PI  +K+FRL+P V+    +
Sbjct: 106  PGKS-VEFVGSNYTGEQAARQTCVYKLGVLDKETQTLRILPIAHNKIFRLEPRVKTKETA 164

Query: 475  DKTPSTPATVAENYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA-I 651
            D   S    +    +++ EL + +GT KA    +K     + +D   Q   + +LD+  +
Sbjct: 165  DSEASEITVLPGRRERLAELDHEFGTKKAINQEKKRRARNLGNDPDAQKSDEDKLDKVDV 224

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
            ++ AL ST++   R+IPPHD  AT P  AYP++KII +G+W +L DI++L   +      
Sbjct: 225  NQSALESTASMVARNIPPHDASATNPREAYPIEKIIESGEWVFLQDIYKLLGQEPRAPTD 284

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
            +Y  FV +R+ +LD IK ++EK+ +  +LSFL HL+KFKD  SMDG  ++K ++ P I+ 
Sbjct: 285  AYPVFVRNRLYRLDDIKDDAEKQSVCGVLSFLTHLVKFKDMNSMDGFDSAKNHKFPPIVR 344

Query: 1012 QRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFE 1191
            Q+  ++F DS+ +R+  +K+ LLISYVLV +L VD F+T PEDI+KDLRM++ +L+ HFE
Sbjct: 345  QKCKTLFKDSDSTRIPVDKINLLISYVLVLTLHVDKFKTDPEDIAKDLRMSSFDLRKHFE 404

Query: 1192 NLGCKYVRRSNTSVATLPVPLQF 1260
            NLGCK+ R  +T +ATLPVPL+F
Sbjct: 405  NLGCKFSREKSTFLATLPVPLKF 427


>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
            gi|355500854|gb|AES82057.1| DNA-directed RNA polymerase I
            subunit rpa49 [Medicago truncatula]
          Length = 412

 Score =  320 bits (821), Expect = 8e-85
 Identities = 186/392 (47%), Positives = 252/392 (64%), Gaps = 15/392 (3%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPNPSA 309
            IE+V   P K PP VGYF S FDP K     +D   V+VYR++    R E+VVSP   S 
Sbjct: 18   IEVVSSNPTKMPPFVGYFTSGFDPVKSSSGSTD---VQVYRNKVMHKRTELVVSPAG-SL 73

Query: 310  VDFVGKTHDGEAAA--HKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKT 483
            V+FVG +++GEAAA      +Y LGVFDKE++ LKIVPI  +K+FRL+P V+G+   + T
Sbjct: 74   VEFVGTSYEGEAAAVARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEPRVKGVEYKEPT 133

Query: 484  PSTPATVAENYDKIRELTNTYGTTKAKK-----GVQKAMQLRI-KDDTT--DQPELDKQL 639
            P TP  + E      ELT    T K +K     G +K+ Q+ I  D+ T  ++PE  K L
Sbjct: 134  P-TPTKMVE------ELTAEQWTEKKRKADAALGTKKSKQMLIWLDEMTADEEPEAKKNL 186

Query: 640  DEA-----IDKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELY 804
            DE      + + ALA+T A  TR IPP++  ATTP+ AY LDKII A +W+YL DI+   
Sbjct: 187  DEKMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIILADEWNYLQDIYYSL 246

Query: 805  QADEEISPKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSK 984
            Q +E  +   Y SF+ +R+N+L  I+ +SEKKKL+CIL F+N+L+KFKD++SMDG+++SK
Sbjct: 247  QKEEAANFSLYPSFIRNRINRLKKIEDDSEKKKLSCILLFINYLVKFKDQHSMDGISSSK 306

Query: 985  TYRIPSIIFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMA 1164
              ++P  +  RF++MF  SE  RL  EK+ LLISYVLV +LF D+F T   DI+KDLRM 
Sbjct: 307  FEKLPYTLHHRFTAMFDVSESRRLPPEKLNLLISYVLVLTLFSDDFRTDYRDIAKDLRMT 366

Query: 1165 TPNLKVHFENLGCKYVRRSNTSVATLPVPLQF 1260
            T  L+  FE+LGCK +     S ATLP+PL F
Sbjct: 367  TLTLRPIFEHLGCKLISSQKVSYATLPIPLTF 398


>ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528588|gb|ESR39838.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 426

 Score =  315 bits (807), Expect = 4e-83
 Identities = 172/383 (44%), Positives = 244/383 (63%), Gaps = 6/383 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRH----RARQNRLEVVVSPP 297
            ++ + EQP+K PPLVGYFPS + P+         P VRVYR+    + R  R+E+VVSP 
Sbjct: 57   VQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELVVSPR 116

Query: 298  NPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSD 477
            + S+VD+VG ++ GEA A + C YA+GV D+ T+ LKIVPI ++K+FRL+P VRG  V+D
Sbjct: 117  D-SSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSDVAD 175

Query: 478  KTPSTPATVAENYDKIRELTNT-YGTTKAKKGVQKAMQLRIKDDTTDQPELDKQLDEA-I 651
            K        AE    ++ + +T YGT K+ +  +K   L  ++D   Q +L  ++    I
Sbjct: 176  KDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKSVKI 235

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
            +K+AL ST+++T  ++PP+D +ATTP+ AYPLDKII  G+WD++ DI+    A  E    
Sbjct: 236  NKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSE---- 291

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
                              + EK+ LA I S++ HL+KFKD++SMDG A++K +RIP I+ 
Sbjct: 292  -----------------DDVEKQTLASIFSYITHLVKFKDQHSMDGGASAKQHRIPKILH 334

Query: 1012 QRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFE 1191
            Q+F + F D+E  RLSD+K+ LLISYVLV +L  D+F T P DI+KDLRM+   L+ HFE
Sbjct: 335  QKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLRMSEFKLRDHFE 394

Query: 1192 NLGCKYVRRSNTSVATLPVPLQF 1260
             LGCK +R  N   ATLPVPLQF
Sbjct: 395  KLGCKLLREKNMLYATLPVPLQF 417


>ref|XP_004487983.1| PREDICTED: uncharacterized protein LOC101507754 [Cicer arietinum]
          Length = 418

 Score =  310 bits (795), Expect = 9e-82
 Identities = 171/383 (44%), Positives = 248/383 (64%), Gaps = 6/383 (1%)
 Frame = +1

Query: 130  IEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSPPNPSA 309
            +++V+E P+K PP +GYFPS FDP    KS S     +VYR++    RLE+VVSP   S+
Sbjct: 30   VKVVRENPNKIPPYIGYFPSGFDP---VKSTSVSAGFQVYRNKNMTKRLELVVSPAG-SS 85

Query: 310  VDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVSDKTPS 489
            VDFVG  + GEA       YALGVFDKE++ LK+VPI ++K+FRLDP V+G+  +    S
Sbjct: 86   VDFVGTNYMGEATGSHRSMYALGVFDKESQTLKVVPIGANKIFRLDPKVKGVEYNLYKES 145

Query: 490  TPATVAE-----NYDKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPEL-DKQLDEAI 651
               TV E        K R  T   GT +  +   K + +R  D+   +  L +K  +  +
Sbjct: 146  ANGTVEELSPEQTAAKRRHSTAVLGTKRHIESTNKILDMRKDDEPESKKNLVEKMKNVVV 205

Query: 652  DKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISPK 831
            ++ ALA+T A  +R+IPP+D  ATTP+ AY LD+II   +W YL DI+ + +  E  +  
Sbjct: 206  NEAALANTEATVSRNIPPYDTSATTPQEAYVLDRIILEREWSYLEDIYYILEQGEAANFS 265

Query: 832  SYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSIIF 1011
            +Y  F+ +R+ +L  I+ ESEKKK  CILS++NHLIKFKD++SMDG++++K+++IP+I+ 
Sbjct: 266  AYPIFIRNRIGRLKKIEDESEKKKQFCILSYINHLIKFKDQHSMDGVSSAKSHKIPTILR 325

Query: 1012 QRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHFE 1191
             +F +MF  SE  RL  EK+ LLISYVLV +LF+D F+T  +DI+KDLRM+   L++ +E
Sbjct: 326  SKFLTMFDVSESKRLPTEKINLLISYVLVLTLFIDGFQTDYKDIAKDLRMSLIPLRLLYE 385

Query: 1192 NLGCKYVRRSNTSVATLPVPLQF 1260
            +LG K V +   S A LP+PL F
Sbjct: 386  HLGGKIVFQDKKSYAILPIPLTF 408


>gb|ESW10773.1| hypothetical protein PHAVU_009G236700g [Phaseolus vulgaris]
          Length = 426

 Score =  309 bits (792), Expect = 2e-81
 Identities = 173/387 (44%), Positives = 250/387 (64%), Gaps = 5/387 (1%)
 Frame = +1

Query: 115  AMTVNIEMVKEQPDKTPPLVGYFPSAFDPNKKKKSRSDPPSVRVYRHRARQNRLEVVVSP 294
            ++ V +E+V+E P+ TPP+VGYFPS FDP K   +   P   ++YRHR    R++VVV P
Sbjct: 33   SIEVEVEVVREHPNITPPIVGYFPSGFDPVKNHANGHGPCDFQLYRHRNMSKRMQVVVRP 92

Query: 295  PNPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRGLVVS 474
            P  S+V+FVG +  GEAAA +   +ALGV DKE   LKIVPI  +KVFRL+P V+ +  +
Sbjct: 93   PR-SSVEFVGTSFSGEAAAGQRSMFALGVLDKEAGSLKIVPIAGNKVFRLEPKVKAVGAA 151

Query: 475  DKTPSTPATVAENYDKI-RELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELD-KQLDEA 648
            D  P++ A       ++  E T  +GT K  +  +K + L+  ++   Q  LD K  + +
Sbjct: 152  DNEPASSALEDMTPQQMFAETTAIWGTKKDIEKAKKKLALKQDENPDSQRNLDVKMRNVS 211

Query: 649  IDKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQADEEISP 828
            ++K AL ST +  +R++PP+D  ATTP+ AY LDKII  G+WDYL DI+ +    EE   
Sbjct: 212  VNKSALESTESHVSRNVPPYDTSATTPQEAYVLDKIILKGEWDYLEDIYCILH-QEEADF 270

Query: 829  KSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYRIPSII 1008
             SY +FV +R+ +L  IK ESEK+K +CI S++NHLIKFKD++S D + T+K ++IP+I+
Sbjct: 271  SSYPTFVRNRIQRLRKIKDESEKRKHSCICSYINHLIKFKDQHSFD-VFTAKGHKIPNIL 329

Query: 1009 FQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPNLKVHF 1188
              +F++MF  SE  RL  EK+ LL+ YVLV +LF D+F T   DI+KDL M    ++  +
Sbjct: 330  RHKFANMFAVSELRRLPPEKISLLVCYVLVLTLFADDFLTDCVDIAKDLGMNVMAVRKVY 389

Query: 1189 ENLGCKYVRRSNT---SVATLPVPLQF 1260
            E LGCK+ R+  +     ATLPVPL+F
Sbjct: 390  EQLGCKFSRQKKSWDGWCATLPVPLKF 416


>ref|XP_006297702.1| hypothetical protein CARUB_v10013731mg [Capsella rubella]
            gi|482566411|gb|EOA30600.1| hypothetical protein
            CARUB_v10013731mg [Capsella rubella]
          Length = 438

 Score =  309 bits (791), Expect = 3e-81
 Identities = 167/389 (42%), Positives = 255/389 (65%), Gaps = 8/389 (2%)
 Frame = +1

Query: 118  MTVNIEMVKEQPDKTPPLVGYFPSAFDP----NKKKKSRSDPPSVRVYRHRAR-QNRLEV 282
            +T+ ++ ++E+PD+  P+V YF ++++P     K  ++ ++ P V VYRH+   + RL+V
Sbjct: 41   ITLKVKQIRERPDRISPIVAYFSTSYNPCEVDPKTGENVNETPKVTVYRHKDETKKRLQV 100

Query: 283  VVSPPNPSAVDFVGKTHDGEAAAHKMCSYALGVFDKETRKLKIVPIVSDKVFRLDPVVRG 462
            VVSPP  + V+FVG  + GE AA +  +YALG+ +++ R ++I+P+  +K+ RL+P ++ 
Sbjct: 101  VVSPPGAN-VEFVGTNYTGEQAAMQTTAYALGIVNRKNRTIRILPVAHNKIIRLEPRIKT 159

Query: 463  LVVSDKTPSTPATVAENY--DKIRELTNTYGTTKAKKGVQKAMQLRIKDDTTDQPELDKQ 636
               +++  S  A V+E    D++R+  +T+GT KA    +K   L + DD   Q  LD +
Sbjct: 160  QEATEEEASGSAVVSELSIRDRLRKTNSTFGTKKAVSRDKKKRDLNVGDDAETQKFLDGK 219

Query: 637  LDEA-IDKDALASTSAETTRSIPPHDLHATTPEAAYPLDKIIFAGDWDYLLDIWELYQAD 813
            L+E  I+  AL STS+   R+IPP+D  ATT   AYPL+KII  G+W +L DI+ L Q +
Sbjct: 220  LNELDINVGALESTSSNVARNIPPYDASATTSREAYPLEKIIEKGEWSFLEDIYRLLQQE 279

Query: 814  EEISPKSYTSFVCSRVNKLDLIKAESEKKKLACILSFLNHLIKFKDKYSMDGLATSKTYR 993
             E +  +Y  FV +R+ KL  IK + EK++++  L+FL HLIKFKD+ SM+  A++K +R
Sbjct: 280  TEAATDAYPVFVRNRLYKLRDIKDDMEKQRVSGTLTFLTHLIKFKDRNSMN-FASAKDHR 338

Query: 994  IPSIIFQRFSSMFIDSEKSRLSDEKVGLLISYVLVTSLFVDNFETIPEDISKDLRMATPN 1173
            IP II ++F  MF+D E  R+  +K  LL+SY LV +L VDNF+T PEDI+KDLRM+T  
Sbjct: 339  IPDIIRRKFMGMFMDPESDRMPVDKTQLLVSYALVLALHVDNFKTDPEDIAKDLRMSTVA 398

Query: 1174 LKVHFENLGCKYVRRSNTSVATLPVPLQF 1260
            L+ HFENLGCK  +   T+ ATLP PL F
Sbjct: 399  LRTHFENLGCKVSKEKTTTFATLPTPLNF 427