BLASTX nr result
ID: Rheum21_contig00010829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00010829
(1034 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus pe... 363 5e-98
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] 362 1e-97
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 360 5e-97
ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synth... 360 7e-97
ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synth... 360 7e-97
gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma ... 360 7e-97
emb|CBI15850.3| unnamed protein product [Vitis vinifera] 354 4e-95
gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus... 350 7e-94
ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Popu... 350 7e-94
ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synth... 347 6e-93
ref|XP_006575439.1| PREDICTED: putative tRNA pseudouridine synth... 345 2e-92
ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul... 343 5e-92
ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutr... 342 2e-91
ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synth... 340 7e-91
ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synth... 339 9e-91
ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synth... 339 9e-91
ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synth... 338 3e-90
ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synth... 336 8e-90
ref|XP_002881100.1| tRNA pseudouridine synthase family protein [... 332 2e-88
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops... 331 3e-88
>gb|EMJ08575.1| hypothetical protein PRUPE_ppa004352mg [Prunus persica]
Length = 515
Score = 363 bits (933), Expect = 5e-98
Identities = 193/325 (59%), Positives = 234/325 (72%), Gaps = 8/325 (2%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +S KMEIPE AW DP GI L N+IN LP +I+VFSILP++R+FDPR
Sbjct: 122 RTDKGVHSLATMISFKMEIPEKAWDGDPYGIALVNHINYYLPHNIKVFSILPAQRSFDPR 181
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
+EC +R YSYLLPA+VIGI + S++EIDYH+SDFN ILN FEGEHP+HNYT R+KYRR
Sbjct: 182 KECNLRMYSYLLPADVIGIKSHFSSAEIDYHISDFNSILNCFEGEHPFHNYTIRSKYRRK 241
Query: 659 LP--SGKRSGQRSKNNRLRHEASASPEEEKGVEDFMD----PEA-TDVLSDEGMPDSSES 501
LP +R G S R EASAS EE V++ D PE+ +VL+ P S+
Sbjct: 242 LPVKKSRRHGSVSITGRSTGEASASESEESDVDENFDGTNTPESDAEVLNQNSSPSSNSE 301
Query: 500 SDDDTIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSL 321
+ Q D N D S+ +IRA+WL+E DE D++SA+H+R+I+ CSCGKL+ SL
Sbjct: 302 GNLRNACEKQGDGGN---DQSAGSVIRARWLYEPDERDRISASHFRKIFLCSCGKLEKSL 358
Query: 320 GLGFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLL 141
G +VE+SISGESFMLHQIRKMVGTAVA+KR LLPRDIL LSL FSRI+LPLAPSEVL
Sbjct: 359 GHDYVELSISGESFMLHQIRKMVGTAVAIKRKLLPRDILTLSLAMFSRIILPLAPSEVLF 418
Query: 140 LRGNDFSLRKLPGK-KRPEMQTLVE 69
LRGN FS+R PG RPEM +VE
Sbjct: 419 LRGNRFSIRGRPGNVTRPEMMAMVE 443
>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
Length = 602
Score = 362 bits (930), Expect = 1e-97
Identities = 188/323 (58%), Positives = 234/323 (72%), Gaps = 6/323 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIP AW DP+GI LANY+N +LP +I+VFSILPS+R+FD R
Sbjct: 123 RTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDAR 182
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAE+IGI N S SEID+H+++FNDILN FEGEHP+ NYT R+KYR+
Sbjct: 183 RECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQ 242
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLS---DEGMPDSSESSDD- 492
P+ + G R + AS E + + + V+S DEG +S S
Sbjct: 243 FPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGVNGVISSDYDEGENQNSSESTSF 302
Query: 491 -DTIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGL 315
+ VGS +++ + SS ++RA+WLH DE D++SA+H+R+I+ CSCGKL+ LGL
Sbjct: 303 VEHPVGSSNNNEKGLKEQSSKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGL 362
Query: 314 GFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLR 135
+VE+SI GESFMLHQIRKMVGTA+AVKR LLPRDIL LSL KFSRIVLPLAPSEVL+LR
Sbjct: 363 DYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILR 422
Query: 134 GNDFSLRKLPGK-KRPEMQTLVE 69
GN FS+RK PG KRPEM TL+E
Sbjct: 423 GNSFSVRKKPGNVKRPEMLTLME 445
>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera]
Length = 564
Score = 360 bits (924), Expect = 5e-97
Identities = 187/323 (57%), Positives = 233/323 (72%), Gaps = 6/323 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIP AW DP+GI LANY+N +LP +I+VFSILPS+R+FD R
Sbjct: 123 RTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDAR 182
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAE+IGI N S SEID+H+++FNDILN FEGEHP+ NYT R+KYR+
Sbjct: 183 RECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQ 242
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLS---DEGMPDSSESSDD- 492
P+ + G R + AS E + + + V+S DEG +S S
Sbjct: 243 FPAKQSPGNGGVFRRAKSSGEASTSEFEVSDGEENSGINGVISSDYDEGENQNSSESTSF 302
Query: 491 -DTIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGL 315
+ VGS +++ + S ++RA+WLH DE D++SA+H+R+I+ CSCGKL+ LGL
Sbjct: 303 VEHPVGSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGL 362
Query: 314 GFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLR 135
+VE+SI GESFMLHQIRKMVGTA+AVKR LLPRDIL LSL KFSRIVLPLAPSEVL+LR
Sbjct: 363 DYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILR 422
Query: 134 GNDFSLRKLPGK-KRPEMQTLVE 69
GN FS+RK PG KRPEM TL+E
Sbjct: 423 GNSFSVRKKPGNVKRPEMLTLME 445
>ref|XP_006468147.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X4
[Citrus sinensis]
Length = 539
Score = 360 bits (923), Expect = 7e-97
Identities = 199/329 (60%), Positives = 234/329 (71%), Gaps = 12/329 (3%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT + LKMEIP AW +DP GI LA +N +LP +I+VFSILPS+R+FDPR
Sbjct: 138 RTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPSQRSFDPR 197
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAEVIGI + +EID H+SDFN ILN FEGEHP+HNYT R+KYRR
Sbjct: 198 RECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTERSKYRRK 257
Query: 659 LPSGKRSGQRSKNNRLRHEASASP-EEEKGVED-FMDPEATDVLSDEGMPDSSESSDDDT 486
++G SK + +A S EE +G ED F E +D D G+ S D+
Sbjct: 258 ---PHKTGCVSKRAKASKDAVFSRVEESEGEEDGFSKVEESDGEEDLGIGGEISSDDEKA 314
Query: 485 IVGS------QDDSTNSFI----DPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGK 336
S Q+D N D +SS +IRA+WL+ETDEADKLSA+H+R+I+ CSCGK
Sbjct: 315 NQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEADKLSASHFRKIFSCSCGK 374
Query: 335 LDMSLGLGFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAP 156
L+ SLG G+VEISISGESFMLHQIRKMVGTAVAVKR LLPRDIL LSL K SRIVLPLAP
Sbjct: 375 LEKSLGFGYVEISISGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKHSRIVLPLAP 434
Query: 155 SEVLLLRGNDFSLRKLPGKKRPEMQTLVE 69
SEVL LR N FS+R PG RPEMQT+VE
Sbjct: 435 SEVLFLRANSFSVRTRPGVTRPEMQTMVE 463
>ref|XP_006468144.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Citrus sinensis] gi|568827612|ref|XP_006468145.1|
PREDICTED: putative tRNA pseudouridine synthase-like
isoform X2 [Citrus sinensis]
gi|568827614|ref|XP_006468146.1| PREDICTED: putative tRNA
pseudouridine synthase-like isoform X3 [Citrus sinensis]
Length = 605
Score = 360 bits (923), Expect = 7e-97
Identities = 199/329 (60%), Positives = 234/329 (71%), Gaps = 12/329 (3%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT + LKMEIP AW +DP GI LA +N +LP +I+VFSILPS+R+FDPR
Sbjct: 204 RTDKGVHSLATMICLKMEIPPDAWKDDPYGIDLAKRVNAHLPRNIKVFSILPSQRSFDPR 263
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAEVIGI + +EID H+SDFN ILN FEGEHP+HNYT R+KYRR
Sbjct: 264 RECNLRKYSYLLPAEVIGINSQLTAAEIDSHISDFNAILNEFEGEHPFHNYTERSKYRRK 323
Query: 659 LPSGKRSGQRSKNNRLRHEASASP-EEEKGVED-FMDPEATDVLSDEGMPDSSESSDDDT 486
++G SK + +A S EE +G ED F E +D D G+ S D+
Sbjct: 324 ---PHKTGCVSKRAKASKDAVFSRVEESEGEEDGFSKVEESDGEEDLGIGGEISSDDEKA 380
Query: 485 IVGS------QDDSTNSFI----DPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGK 336
S Q+D N D +SS +IRA+WL+ETDEADKLSA+H+R+I+ CSCGK
Sbjct: 381 NQNSMVSGVHQEDCCNQHANGLKDQNSSSVIRARWLYETDEADKLSASHFRKIFSCSCGK 440
Query: 335 LDMSLGLGFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAP 156
L+ SLG G+VEISISGESFMLHQIRKMVGTAVAVKR LLPRDIL LSL K SRIVLPLAP
Sbjct: 441 LEKSLGFGYVEISISGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKHSRIVLPLAP 500
Query: 155 SEVLLLRGNDFSLRKLPGKKRPEMQTLVE 69
SEVL LR N FS+R PG RPEMQT+VE
Sbjct: 501 SEVLFLRANSFSVRTRPGVTRPEMQTMVE 529
>gb|EOY34659.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 507
Score = 360 bits (923), Expect = 7e-97
Identities = 188/320 (58%), Positives = 234/320 (73%), Gaps = 3/320 (0%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT ++LKMEIPE AW DP+GI LA +N LP+ I+VFSILPS+++FDPR
Sbjct: 117 RTDKGVHSLATMITLKMEIPEDAWKEDPNGIALAKCVNSYLPDSIKVFSILPSQKSFDPR 176
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAE+IGI + S +EI++H+SDFN ILN FEGEHP+HNYT RAKYRR
Sbjct: 177 RECNLRKYSYLLPAEIIGIKSHFSEAEINHHISDFNSILNCFEGEHPFHNYTQRAKYRRQ 236
Query: 659 LPSGK--RSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDDT 486
+P + R+G+ K E+S S EE VE+ E T L+ E +S D+
Sbjct: 237 IPPRQTARNGRVPKGAEAHDESSTSELEESDVEEDPRIEETTTLNSE----EKSTSFDEP 292
Query: 485 IVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFV 306
V D NS SS+ ++RA+WL+E DE D+++A+H+R+I+ CSCG+L+ S+G ++
Sbjct: 293 RVDCCDGQGNSLQYQSSNVVVRARWLYEPDETDRITASHFRKIFLCSCGRLENSMGFDYI 352
Query: 305 EISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGND 126
EISI GESFMLHQIRKMVGTAVAVKRNL PRDIL LSL KFSRIVLPLAPSEVL+LRGN
Sbjct: 353 EISIWGESFMLHQIRKMVGTAVAVKRNLFPRDILTLSLAKFSRIVLPLAPSEVLILRGNT 412
Query: 125 FSLRKLPGK-KRPEMQTLVE 69
F LRK+P RPEM T+VE
Sbjct: 413 FILRKMPSNITRPEMLTMVE 432
>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 354 bits (908), Expect = 4e-95
Identities = 182/318 (57%), Positives = 226/318 (71%), Gaps = 1/318 (0%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIP AW DP+GI LANY+N +LP +I+VFSILPS+R+FD R
Sbjct: 123 RTDKGVHSLATMISLKMEIPANAWKEDPNGIALANYVNFHLPNNIKVFSILPSQRSFDAR 182
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAE+IGI N S SEID+H+++FNDILN FEGEHP+ NYT R+KYR+
Sbjct: 183 RECDLRRYSYLLPAEIIGIKSNSSASEIDHHIAEFNDILNTFEGEHPFQNYTIRSKYRKQ 242
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDDTIV 480
P+ + G R + +S +E E S +S + V
Sbjct: 243 FPAKQSPGNGGVFRRAKSSVISSDYDE----------------GENQNSSESTSFVEHPV 286
Query: 479 GSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVEI 300
GS +++ + S ++RA+WLH DE D++SA+H+R+I+ CSCGKL+ LGL +VE+
Sbjct: 287 GSSNNNEKGLKEQSPKLVVRARWLHGPDERDRISASHFRKIFNCSCGKLEKFLGLDYVEL 346
Query: 299 SISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDFS 120
SI GESFMLHQIRKMVGTA+AVKR LLPRDIL LSL KFSRIVLPLAPSEVL+LRGN FS
Sbjct: 347 SICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFS 406
Query: 119 LRKLPGK-KRPEMQTLVE 69
+RK PG KRPEM TL+E
Sbjct: 407 VRKKPGNVKRPEMLTLME 424
>gb|ESW14065.1| hypothetical protein PHAVU_008G250100g [Phaseolus vulgaris]
Length = 507
Score = 350 bits (897), Expect = 7e-94
Identities = 182/319 (57%), Positives = 231/319 (72%), Gaps = 2/319 (0%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT VS KMEIPE AW DP G LANY+N LP DI+V SILPS+R+FDPR
Sbjct: 120 RTDKGVHSLATIVSFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVLSILPSQRSFDPR 179
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
+EC R YSYLLPAE+IGI + S EIDYH+S+F+DILNVFEGEHP+HNYT RAKYR++
Sbjct: 180 KECAWRKYSYLLPAEIIGIQSDSSNDEIDYHISEFHDILNVFEGEHPFHNYTARAKYRKH 239
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDF-MDPEATDVLSDEGMPDSSESSDDDTI 483
P+ K+ +S +E+ +E+ E+F +D T+ + S + +
Sbjct: 240 FPN-KQLSSKSVERLPPYESECEYSDEE--ENFEIDEAFTENIECRSQKCSETHNFGKPV 296
Query: 482 VGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVE 303
VGS + + N S + RA+WL+E DEAD+LSA+H+R+++ CSCGKL+ SLG ++E
Sbjct: 297 VGSSNKNGNRLPGQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIE 356
Query: 302 ISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDF 123
ISI GESFMLHQIRKMVGTAVAVKR +LP+DI++LSL +FSRI+LPLAPSEVL+LRGN F
Sbjct: 357 ISIQGESFMLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILPLAPSEVLILRGNRF 416
Query: 122 SLRKLPGK-KRPEMQTLVE 69
S+R PG RPEMQ +VE
Sbjct: 417 SIRTRPGNVTRPEMQAMVE 435
>ref|XP_002319961.2| hypothetical protein POPTR_0013s15030g [Populus trichocarpa]
gi|550325882|gb|EEE95884.2| hypothetical protein
POPTR_0013s15030g [Populus trichocarpa]
Length = 505
Score = 350 bits (897), Expect = 7e-94
Identities = 187/318 (58%), Positives = 231/318 (72%), Gaps = 1/318 (0%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLATT+++KMEIPE AW +D G++LA ++N LP+ IRV SILP++++FDPR
Sbjct: 136 RTDKGVHSLATTITMKMEIPENAWKDDLYGMVLAKHVNSYLPDSIRVLSILPAQKSFDPR 195
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC +R YSYLLPAEVIGI + S +EID H+SDFN+ILN FEG+HP+HNYT R+KYRR
Sbjct: 196 RECDIRKYSYLLPAEVIGIKSHFSMAEIDDHISDFNNILNAFEGDHPFHNYTVRSKYRRK 255
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDDTIV 480
P+ ++G SK R SAS EE VE S++S + +I
Sbjct: 256 YPT--KNGHVSKRARSSWGTSASGSEENHVE------------------LSQNSLESSIC 295
Query: 479 GSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVEI 300
D D SS+ +RA+WLHE DE D++ AAH+R+I+ CSCGKL+ SLG FVEI
Sbjct: 296 DLNGDILK---DQSSNLPLRARWLHEPDETDRIGAAHFRKIFRCSCGKLEKSLGFDFVEI 352
Query: 299 SISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDFS 120
SI GESFMLHQIRKMVGTAVAVKR +LPRD++ LSL KFSRIVLPLAPSEVL+LRGNDFS
Sbjct: 353 SIWGESFMLHQIRKMVGTAVAVKRKVLPRDLIMLSLTKFSRIVLPLAPSEVLILRGNDFS 412
Query: 119 LRKLPGK-KRPEMQTLVE 69
LRK G+ KRPEM+T+VE
Sbjct: 413 LRKKSGEGKRPEMETMVE 430
>ref|XP_006575435.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Glycine max] gi|571441413|ref|XP_006575436.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X2
[Glycine max] gi|571441415|ref|XP_006575437.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X3
[Glycine max] gi|571441417|ref|XP_006575438.1| PREDICTED:
putative tRNA pseudouridine synthase-like isoform X4
[Glycine max]
Length = 493
Score = 347 bits (889), Expect = 6e-93
Identities = 181/323 (56%), Positives = 229/323 (70%), Gaps = 6/323 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +S KMEIPE AW DP G LANY+N LP DI+V SILPS+R+FDPR
Sbjct: 105 RTDKGVHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQRSFDPR 164
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
+EC +R YSYLLPAE+IGI + S E+DYH+S+FNDILNVFEG HP+HNYT R+KYR+
Sbjct: 165 KECILRKYSYLLPAEIIGIQSHFS-DEVDYHISEFNDILNVFEGIHPFHNYTARSKYRKQ 223
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDD---- 492
P+ + S + + R S S E E D + TD E + S+ +
Sbjct: 224 FPNRQSSSKSGTSAR----ESLSYESECEYSDGEENSETDEAYTENIVCQSQKFSETHHF 279
Query: 491 -DTIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGL 315
+ +VGS + + N D S + RA+WL+E DEAD+LSA+H+R+++ CSCGKL+ SLG
Sbjct: 280 AEPVVGSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGY 339
Query: 314 GFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLR 135
++EISI GESFMLHQIRKMVGTAVAVKR LP+DI++LSL +FSRI+LPLAPSE L+LR
Sbjct: 340 NYIEISIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILR 399
Query: 134 GNDFSLRKLPGK-KRPEMQTLVE 69
GN FS+R PG RPEMQT+V+
Sbjct: 400 GNRFSIRTRPGNITRPEMQTIVK 422
>ref|XP_006575439.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X5
[Glycine max]
Length = 403
Score = 345 bits (884), Expect = 2e-92
Identities = 179/318 (56%), Positives = 227/318 (71%), Gaps = 6/318 (1%)
Frame = -1
Query: 1004 VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPRRECTV 825
VHSLAT +S KMEIPE AW DP G LANY+N LP DI+V SILPS+R+FDPR+EC +
Sbjct: 20 VHSLATIISFKMEIPENAWNGDPYGFGLANYVNSYLPFDIKVISILPSQRSFDPRKECIL 79
Query: 824 RNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRNLPSGK 645
R YSYLLPAE+IGI + S E+DYH+S+FNDILNVFEG HP+HNYT R+KYR+ P+ +
Sbjct: 80 RKYSYLLPAEIIGIQSHFS-DEVDYHISEFNDILNVFEGIHPFHNYTARSKYRKQFPNRQ 138
Query: 644 RSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDD-----DTIV 480
S + + R S S E E D + TD E + S+ + + +V
Sbjct: 139 SSSKSGTSAR----ESLSYESECEYSDGEENSETDEAYTENIVCQSQKFSETHHFAEPVV 194
Query: 479 GSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVEI 300
GS + + N D S + RA+WL+E DEAD+LSA+H+R+++ CSCGKL+ SLG ++EI
Sbjct: 195 GSSNKNGNGLHDQDSRLVARARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGYNYIEI 254
Query: 299 SISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDFS 120
SI GESFMLHQIRKMVGTAVAVKR LP+DI++LSL +FSRI+LPLAPSE L+LRGN FS
Sbjct: 255 SIQGESFMLHQIRKMVGTAVAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFS 314
Query: 119 LRKLPGK-KRPEMQTLVE 69
+R PG RPEMQT+V+
Sbjct: 315 IRTRPGNITRPEMQTIVK 332
>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
gi|355517306|gb|AES98929.1| Pseudouridylate synthase
[Medicago truncatula]
Length = 501
Score = 343 bits (881), Expect = 5e-92
Identities = 177/319 (55%), Positives = 229/319 (71%), Gaps = 2/319 (0%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT V+ KMEIPE +W DP G LANY+N LP DI+V SILP++R+FDPR
Sbjct: 117 RTDKGVHSLATMVAFKMEIPENSWNEDPFGFALANYVNSYLPCDIKVISILPAQRSFDPR 176
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
+EC +R YSYLLPA++IGI + S EIDYH+S+FNDIL FEG HP+HNYT+R++YRR+
Sbjct: 177 KECVLRKYSYLLPADIIGIQSHSSNDEIDYHMSEFNDILKEFEGGHPFHNYTSRSRYRRH 236
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDF-MDPEATDVLSDEGMPDSSESSDDDTI 483
+P R SK + ++ E+ E+F +D T + + S S + +
Sbjct: 237 IP---RRPSHSKCGEILSAYNSEQEDSDEEENFKVDEALTGNIECQNQKSSGTSDSCEPV 293
Query: 482 VGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVE 303
+ + + + D SSS ++RAKWL+E DEAD+L+A+H+RR++ CS GKL+ S+G ++E
Sbjct: 294 I--ETGNKGNLHDQSSSSVVRAKWLYEPDEADRLNASHFRRVFRCSSGKLEKSMGHSYIE 351
Query: 302 ISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDF 123
I I GESFMLHQIRKMV TAVAVKR LLPRDI+ LSL+KFSRI+LPLAPSEVLLLRGN F
Sbjct: 352 IYIEGESFMLHQIRKMVATAVAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSF 411
Query: 122 SLRKLPGK-KRPEMQTLVE 69
S+R PG RPEMQT+VE
Sbjct: 412 SMRTKPGNVTRPEMQTIVE 430
>ref|XP_006410132.1| hypothetical protein EUTSA_v10016529mg [Eutrema salsugineum]
gi|557111301|gb|ESQ51585.1| hypothetical protein
EUTSA_v10016529mg [Eutrema salsugineum]
Length = 512
Score = 342 bits (876), Expect = 2e-91
Identities = 182/321 (56%), Positives = 230/321 (71%), Gaps = 4/321 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLATT+SLKMEIP+ AW +DP G +LA I+ +LPE+IRVFS+LPS+R FDPR
Sbjct: 125 RTDKGVHSLATTISLKMEIPDTAWKDDPQGTVLAKCISKHLPENIRVFSVLPSQRRFDPR 184
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
RECT+R YSYLLP VIG+ + ++ EID H+SDFN+IL FEG++P+HNYT R+KYR+
Sbjct: 185 RECTLRMYSYLLPVGVIGVKNSFTSDEIDDHISDFNEILKEFEGDYPFHNYTQRSKYRKK 244
Query: 659 LPSG--KRSGQRSKNNRLRHEASASPEEE-KGVEDFMDPEATDVLSDEGMPDSSESSDDD 489
+R+G+ K + S EE +G E+ ++ E D S+E +P+S
Sbjct: 245 AKQKLTQRNGRPPKKPKFEASVSEYTEENCRGNEEEVEGEEADGESNEEVPES------- 297
Query: 488 TIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGF 309
D+T ++I RAKWLHE DE DKLSAAH+R+++ C CGKL+ SLG F
Sbjct: 298 -------DNTQAYI--------RAKWLHEPDETDKLSAAHFRKVFRCRCGKLETSLGFCF 342
Query: 308 VEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGN 129
VEISI GESFMLHQIRKM+GTAVAVKR LLPRDI+ LSLNKF+RIVLPLAPSEVL+LRGN
Sbjct: 343 VEISIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGN 402
Query: 128 DFSLRKLPGK-KRPEMQTLVE 69
F + K PGK KRPE++ + E
Sbjct: 403 SFEVLKSPGKFKRPEVKAMSE 423
>ref|XP_004296032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Fragaria vesca
subsp. vesca]
Length = 509
Score = 340 bits (871), Expect = 7e-91
Identities = 179/323 (55%), Positives = 230/323 (71%), Gaps = 6/323 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIPE AW DP GI L N+IN LP DI+VFS +P++R+FDPR
Sbjct: 120 RTDKGVHSLATMISLKMEIPENAWDGDPYGIALVNHINSYLPRDIKVFSAVPAQRSFDPR 179
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
+EC +R YSYLLPA+VIGI + S +EI+ H++DFNDILN FEGEHP+HNYT R+KYR
Sbjct: 180 KECNLRMYSYLLPADVIGIKSHFSAAEIEDHIADFNDILNAFEGEHPFHNYTIRSKYRMK 239
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVED-----FMDPEATDVLSDEGMPDSSESSD 495
LP K R+ + R AS E +G +D + T+VL+ S S+
Sbjct: 240 LPGKKSPIYRNMSKTERSTVEASSSELEGSDDEDKFKGRNSSETEVLNQN---SSMSSNG 296
Query: 494 DDTIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGL 315
++ ++ + + + S+ ++ AKWL+E DE+D++ A+H+R+I+ CSCGKL+ SL
Sbjct: 297 NEILLHACKKQEDVLKEKSTDSVVYAKWLYEPDESDRIGASHFRKIFRCSCGKLEKSLTH 356
Query: 314 GFVEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLR 135
+VE+SI GESFMLHQIRKMVGTAVAVKR LLPRDIL LSL KFSRI+LPLAPSEVL+LR
Sbjct: 357 EYVELSIWGESFMLHQIRKMVGTAVAVKRKLLPRDILTLSLAKFSRIILPLAPSEVLILR 416
Query: 134 GNDFSLRKLPGK-KRPEMQTLVE 69
GN FS+R+ PG KRPEM +VE
Sbjct: 417 GNRFSIRERPGNVKRPEMIAMVE 439
>ref|XP_006348028.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X2
[Solanum tuberosum]
Length = 423
Score = 339 bits (870), Expect = 9e-91
Identities = 178/321 (55%), Positives = 231/321 (71%), Gaps = 4/321 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIP AW +DP+GI LAN +N +LPE+IRVFSILPSK+ FD R
Sbjct: 46 RTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDAR 105
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC R YSYL+PAE+IGI + ++SEI+YH+++FNDILN FEGEHP+HNYT R+KYR+
Sbjct: 106 RECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQ 165
Query: 659 LPSGKRSGQRSKNNRLRHEA---SASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDD 489
P+ N L++E+ P EK + + + ++G+ E+ + +
Sbjct: 166 SPA---------RNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQN 216
Query: 488 TIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGF 309
G+ ++ + D +S I+A+WLHE D DKLS+AH+RRI+ C CGKL+ LG+ +
Sbjct: 217 P-EGNCNEKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNY 275
Query: 308 VEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGN 129
VE+SI GESFMLHQIRKMVGTAVA+KRNLLP DIL +SL KFSRIVLPLAPSEVL+L+GN
Sbjct: 276 VEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGN 335
Query: 128 DFSLRKLPGK-KRPEMQTLVE 69
+F+LR PG RPEM TL+E
Sbjct: 336 NFALRNHPGNIIRPEMLTLLE 356
>ref|XP_006348027.1| PREDICTED: putative tRNA pseudouridine synthase-like isoform X1
[Solanum tuberosum]
Length = 487
Score = 339 bits (870), Expect = 9e-91
Identities = 178/321 (55%), Positives = 231/321 (71%), Gaps = 4/321 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIP AW +DP+GI LAN +N +LPE+IRVFSILPSK+ FD R
Sbjct: 110 RTDKGVHSLATMISLKMEIPADAWEDDPNGIALANCVNSSLPENIRVFSILPSKKRFDAR 169
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC R YSYL+PAE+IGI + ++SEI+YH+++FNDILN FEGEHP+HNYT R+KYR+
Sbjct: 170 RECNARKYSYLIPAEIIGIKNDSTSSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQ 229
Query: 659 LPSGKRSGQRSKNNRLRHEA---SASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDD 489
P+ N L++E+ P EK + + + ++G+ E+ + +
Sbjct: 230 SPA---------RNLLKNESLLKKGRPSSEKEISGSEESDGEQNGKEKGVVTIVEAENQN 280
Query: 488 TIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGF 309
G+ ++ + D +S I+A+WLHE D DKLS+AH+RRI+ C CGKL+ LG+ +
Sbjct: 281 P-EGNCNEKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNY 339
Query: 308 VEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGN 129
VE+SI GESFMLHQIRKMVGTAVA+KRNLLP DIL +SL KFSRIVLPLAPSEVL+L+GN
Sbjct: 340 VEVSICGESFMLHQIRKMVGTAVAIKRNLLPHDILRMSLCKFSRIVLPLAPSEVLVLKGN 399
Query: 128 DFSLRKLPGK-KRPEMQTLVE 69
+F+LR PG RPEM TL+E
Sbjct: 400 NFALRNHPGNIIRPEMLTLLE 420
>ref|XP_004247032.1| PREDICTED: putative tRNA pseudouridine synthase-like [Solanum
lycopersicum]
Length = 496
Score = 338 bits (866), Expect = 3e-90
Identities = 180/318 (56%), Positives = 230/318 (72%), Gaps = 1/318 (0%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +SLKMEIP AW +DP+GI LAN +N +LPE+IRVFSILPSK+ FD R
Sbjct: 106 RTDKGVHSLATMISLKMEIPADAWEDDPNGITLANCVNSSLPENIRVFSILPSKKRFDAR 165
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
REC R YSYL+PAE+IGI + ++SEI+YH+++FNDILN FEGEHP+HNYT R+KYR+
Sbjct: 166 RECNARKYSYLIPAEIIGIKNDSASSEIEYHIANFNDILNSFEGEHPFHNYTIRSKYRKQ 225
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDDTIV 480
P + KN+ L + S EEE + +D E ++G+ E +++
Sbjct: 226 SP----ARNLLKNDSLLKKGRPSSEEEISGSEEIDGEQN--RKEQGVVTIVE-AENQNAE 278
Query: 479 GSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVEI 300
G+ + + D +S I+A+WLHE D DKLS+AH+RRI+ C CGKL+ LG+ +VE+
Sbjct: 279 GNCNLKVSHSKDLNSVIPIQARWLHEPDARDKLSSAHFRRIFHCHCGKLEKLLGMNYVEV 338
Query: 299 SISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDFS 120
SI GESFMLHQIRKMVGTAVA+KRNLLP D L +SL KFSRIVLPLAPSEVL+L+GN+F+
Sbjct: 339 SICGESFMLHQIRKMVGTAVAIKRNLLPHDTLRMSLCKFSRIVLPLAPSEVLVLKGNNFA 398
Query: 119 LRKLPGK-KRPEMQTLVE 69
LR PG RPEM TL+E
Sbjct: 399 LRNHPGNIIRPEMLTLLE 416
>ref|XP_004490755.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial [Cicer
arietinum]
Length = 474
Score = 336 bits (862), Expect = 8e-90
Identities = 179/321 (55%), Positives = 223/321 (69%), Gaps = 4/321 (1%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT +S KMEIPE +W DP G LANY+N LP DI+V SILPS+R+FDPR
Sbjct: 89 RTDKGVHSLATILSFKMEIPENSWNGDPYGFSLANYVNSYLPCDIKVISILPSQRSFDPR 148
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
+EC +R YSYLLPAE+IGI S EIDYH+S+FNDIL FEG HP+HNYT R++YR++
Sbjct: 149 KECNLRKYSYLLPAEIIGIQSYSSNDEIDYHLSEFNDILKEFEGGHPFHNYTARSRYRKH 208
Query: 659 L---PSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDD 489
PS +SG+ +E S E K E + G DS E +
Sbjct: 209 FRRRPSQSKSGESLSAYNSEYEDSDKEENFKIDEAHTENIVCQNQKSSGTFDSCEHLNS- 267
Query: 488 TIVGSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGF 309
G++ DS + D SS ++RAKWL+E D+AD+L+A+H+RR++ C CGKL+ SL +
Sbjct: 268 --TGNEKDSLH---DQSSRLVVRAKWLYEPDDADRLNASHFRRVFKCCCGKLERSLRHNY 322
Query: 308 VEISISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGN 129
+EI I GESFMLHQIRKMVGTAVAVKR LLPRDI+ +SL+KFSRI+LPLAP EVL+LRGN
Sbjct: 323 IEIYIEGESFMLHQIRKMVGTAVAVKRKLLPRDIVTMSLSKFSRIILPLAPPEVLILRGN 382
Query: 128 DFSLRKLPGK-KRPEMQTLVE 69
FS+R PG RPEMQT+VE
Sbjct: 383 SFSMRNKPGNVTRPEMQTIVE 403
>ref|XP_002881100.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata subsp.
lyrata] gi|297326939|gb|EFH57359.1| tRNA pseudouridine
synthase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 507
Score = 332 bits (850), Expect = 2e-88
Identities = 178/317 (56%), Positives = 219/317 (69%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT++SLKMEIPE AW +DP G +LA I+ +LPE+IRVFS+LPS R FDPR
Sbjct: 123 RTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPSNRRFDPR 182
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
RECT+R YSYLLP +VIGI + ++ EIDYH++DFN ILN FEGE+P+HNYT R++YRR
Sbjct: 183 RECTLRKYSYLLPVDVIGIKNSFTSDEIDYHITDFNKILNEFEGEYPFHNYTQRSRYRR- 241
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDDTIV 480
+S Q+ K R P+ K E E + +E + SD+
Sbjct: 242 -----KSEQKIKQRNGR--PPRIPKSIKASESEFTEENHREIEEEEEKEMDGESDEHVPP 294
Query: 479 GSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVEI 300
S + NS RAKWL+E DE DKLS AH+R+++ C GKL+ SLG GFVEI
Sbjct: 295 DSDNSQVNS----------RAKWLYEPDETDKLSGAHFRKVFRCRSGKLENSLGFGFVEI 344
Query: 299 SISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDFS 120
SI GESFMLHQIRKM+GTAVAVKR LLPRDI+ LSLNKF+RIVLPLAPSEVL+LRGN F
Sbjct: 345 SIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFE 404
Query: 119 LRKLPGKKRPEMQTLVE 69
+R+LP +RP M+ E
Sbjct: 405 VRRLP--ERPGMEATGE 419
>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
tRNA pseudouridine synthase; AltName: Full=tRNA
pseudouridylate synthase; AltName: Full=tRNA-uridine
isomerase gi|2347206|gb|AAC16945.1| putative
pseudouridine synthase [Arabidopsis thaliana]
gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
synthase [Arabidopsis thaliana]
Length = 510
Score = 331 bits (849), Expect = 3e-88
Identities = 173/317 (54%), Positives = 222/317 (70%)
Frame = -1
Query: 1019 RTSP*VHSLATTVSLKMEIPEFAWMNDPSGILLANYINLNLPEDIRVFSILPSKRTFDPR 840
RT VHSLAT++SLKMEIPE AW +DP G +LA I+ +LPE+IRVFS+LPS R FDPR
Sbjct: 123 RTDKGVHSLATSISLKMEIPETAWKDDPQGTVLAKCISKHLPENIRVFSVLPSNRRFDPR 182
Query: 839 RECTVRNYSYLLPAEVIGITENCSTSEIDYHVSDFNDILNVFEGEHPYHNYTTRAKYRRN 660
RECT+R YSYLLP +V+GI + ++ EIDYH++DFN+IL FEGE+P+HNYT R++YRR
Sbjct: 183 RECTLRKYSYLLPVDVLGIKNSFTSDEIDYHITDFNEILKEFEGEYPFHNYTQRSRYRR- 241
Query: 659 LPSGKRSGQRSKNNRLRHEASASPEEEKGVEDFMDPEATDVLSDEGMPDSSESSDDDTIV 480
+S Q+ K R P E K ++ + +E + E ++ +
Sbjct: 242 -----KSEQKIKQRNGR-----PPREPKSIK-----ASESEFREENHIEIGEEEEEKEVD 286
Query: 479 GSQDDSTNSFIDPSSSELIRAKWLHETDEADKLSAAHWRRIYCCSCGKLDMSLGLGFVEI 300
G D+ + +S RAKWL+E DE DK+S AH+R+++ C GKL+ SLG GFVEI
Sbjct: 287 GESDEHVVTPDSDNSQVYSRAKWLYEPDETDKISGAHFRKVFRCRSGKLENSLGFGFVEI 346
Query: 299 SISGESFMLHQIRKMVGTAVAVKRNLLPRDILELSLNKFSRIVLPLAPSEVLLLRGNDFS 120
SI GESFMLHQIRKM+GTAVAVKR LLPRDI+ LSLNKF+RIVLPLAPSEVL+LRGN F
Sbjct: 347 SIWGESFMLHQIRKMIGTAVAVKRELLPRDIIRLSLNKFTRIVLPLAPSEVLILRGNSFE 406
Query: 119 LRKLPGKKRPEMQTLVE 69
+R+LP +RP M+ E
Sbjct: 407 VRRLP--ERPGMEATGE 421