BLASTX nr result
ID: Rheum21_contig00010766
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00010766
(303 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002515835.1| pentatricopeptide repeat-containing protein,... 110 1e-22
ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
emb|CBI40338.3| unnamed protein product [Vitis vinifera] 97 2e-18
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] 97 2e-18
ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis] 95 1e-17
gb|EOY16969.1| Tetratricopeptide repeat (TPR)-like superfamily p... 93 4e-17
gb|EOY16968.1| Tetratricopeptide repeat (TPR)-like superfamily p... 93 4e-17
ref|XP_004301456.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004969297.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group] g... 77 2e-12
emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group] 77 2e-12
ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [S... 76 5e-12
ref|XP_006654247.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays] 75 7e-12
ref|XP_004975518.1| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
ref|XP_003637572.1| Pentatricopeptide repeat-containing protein ... 73 3e-11
ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group] g... 73 3e-11
>ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544990|gb|EEF46504.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 655
Score = 110 bits (276), Expect = 1e-22
Identities = 57/98 (58%), Positives = 71/98 (72%)
Frame = +1
Query: 10 SHDLFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRM 189
S +L S YL+ +APSHAL++LQ L+PSP AV WNALIRR V L LLQ S+ ++ TMRR+
Sbjct: 74 SLNLISTYLALNAPSHALSLLQCLTPSPSAVYWWNALIRRAVRLGLLQHSLSLFRTMRRL 133
Query: 190 GLSPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
SPD YTFPFV KA GE+PSF G+ +H V + G D
Sbjct: 134 NWSPDHYTFPFVFKACGELPSFLHGSCIHAIVCSTGFD 171
>ref|XP_006471568.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Citrus sinensis]
Length = 860
Score = 99.8 bits (247), Expect = 3e-19
Identities = 52/95 (54%), Positives = 66/95 (69%)
Frame = +1
Query: 19 LFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLS 198
L +AY+S +APS AL++LQR+SPSP +V WNALIRR V L L + R++ M R G
Sbjct: 73 LIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWH 132
Query: 199 PDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
PD YTFPFVLKA GE+PS G+SVH + + G D
Sbjct: 133 PDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFD 167
>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/101 (50%), Positives = 65/101 (64%)
Frame = +1
Query: 1 PRRSHDLFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTM 180
P + S YL+ ++P+ AL+VL+RL PS V WN LIRR V L L+ +++Y M
Sbjct: 58 PHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRM 117
Query: 181 RRMGLSPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+R+G PD YTFPFVLKA GEIPSF G SVH V A G +
Sbjct: 118 QRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 158
>emb|CBI40338.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/101 (50%), Positives = 65/101 (64%)
Frame = +1
Query: 1 PRRSHDLFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTM 180
P + S YL+ ++P+ AL+VL+RL PS V WN LIRR V L L+ +++Y M
Sbjct: 58 PHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRM 117
Query: 181 RRMGLSPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+R+G PD YTFPFVLKA GEIPSF G SVH V A G +
Sbjct: 118 QRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 158
>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/101 (50%), Positives = 65/101 (64%)
Frame = +1
Query: 1 PRRSHDLFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTM 180
P + S YL+ ++P+ AL+VL+RL PS V WN LIRR V L L+ +++Y M
Sbjct: 77 PHDPTHIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRM 136
Query: 181 RRMGLSPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+R+G PD YTFPFVLKA GEIPSF G SVH V A G +
Sbjct: 137 QRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 177
>ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 96.7 bits (239), Expect = 3e-18
Identities = 51/91 (56%), Positives = 60/91 (65%)
Frame = +1
Query: 28 AYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPDC 207
AY+ A + A+++LQRL PS V WNALIRR V L LL ++ YC M+R+G PD
Sbjct: 68 AYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDH 127
Query: 208 YTFPFVLKATGEIPSFPLGTSVHGSVVA*GL 300
YTFPFVLKA GEIPS G SVH V A GL
Sbjct: 128 YTFPFVLKACGEIPSLRHGASVHAIVCANGL 158
>gb|EXB63285.1| hypothetical protein L484_012475 [Morus notabilis]
Length = 858
Score = 94.7 bits (234), Expect = 1e-17
Identities = 48/96 (50%), Positives = 63/96 (65%)
Frame = +1
Query: 16 DLFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGL 195
DL AY++ +A +HA+ +L+ L PSP +V WN IRR V LL + + +Y M R+G
Sbjct: 69 DLIGAYMACNAHTHAVVLLEPLEPSPFSVFWWNQFIRRAVGSGLLNEVLGLYQRMHRLGW 128
Query: 196 SPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
PD YTFPFVLKA GE+ SF LG SVH +V A G +
Sbjct: 129 RPDEYTFPFVLKACGELSSFRLGASVHAAVCANGFE 164
>gb|EOY16969.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao]
Length = 850
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = +1
Query: 19 LFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLS 198
L SAYL+ A SH++++LQR +PSP AV WN+LIRR + L + ++ M +G S
Sbjct: 62 LISAYLTHHASSHSISLLQRFTPSPSAVFFWNSLIRRSLHLGFSHDVLTLFRRMLSLGCS 121
Query: 199 PDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
PD YTFPFVLKA G++PSF G +VH V G +
Sbjct: 122 PDHYTFPFVLKACGQLPSFRRGAAVHAVVCTTGFE 156
>gb|EOY16968.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 862
Score = 92.8 bits (229), Expect = 4e-17
Identities = 46/95 (48%), Positives = 62/95 (65%)
Frame = +1
Query: 19 LFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLS 198
L SAYL+ A SH++++LQR +PSP AV WN+LIRR + L + ++ M +G S
Sbjct: 74 LISAYLTHHASSHSISLLQRFTPSPSAVFFWNSLIRRSLHLGFSHDVLTLFRRMLSLGCS 133
Query: 199 PDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
PD YTFPFVLKA G++PSF G +VH V G +
Sbjct: 134 PDHYTFPFVLKACGQLPSFRRGAAVHAVVCTTGFE 168
>ref|XP_004301456.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Fragaria vesca subsp. vesca]
Length = 850
Score = 88.2 bits (217), Expect = 1e-15
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Frame = +1
Query: 19 LFSAYLSADAPSHALAVLQRLS-PSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGL 195
L +AYLS +APSHAL++L+RL+ P P AV WN LIR V L+ + +Y M+R+G
Sbjct: 61 LIAAYLSFNAPSHALSLLERLATPRPAAVYWWNVLIRSAVRSGFLEHVLSLYSRMQRLGW 120
Query: 196 SPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
PD YT+PFV KA GE+ S G + HG+V G +
Sbjct: 121 KPDHYTYPFVFKACGELGSLRRGEAAHGAVCVGGFE 156
>ref|XP_004498096.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cicer arietinum]
Length = 855
Score = 87.0 bits (214), Expect = 2e-15
Identities = 43/96 (44%), Positives = 62/96 (64%)
Frame = +1
Query: 16 DLFSAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGL 195
+L S+Y+S ++ +AL++LQ L PSP +V WN LIR+ + + + +YC M+ +
Sbjct: 65 NLISSYISTNSIPNALSLLQTLHPSPSSVFWWNQLIRQSLHFNSPHVVLHLYCRMKTLHW 124
Query: 196 SPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
SPD YTFPFV KA G++ SF LG S+H SV G D
Sbjct: 125 SPDHYTFPFVFKACGDVLSFNLGASIHASVFRSGFD 160
>ref|XP_004969297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Setaria italica]
Length = 886
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/93 (41%), Positives = 57/93 (61%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A S AL+VL+R++PSP WN LIR + L +++ V C M R G PD
Sbjct: 91 ASYLACGATSDALSVLERVTPSPAV--WWNLLIREHIKEGRLDRALGVSCRMLRAGTRPD 148
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T PF LKA GE+PS+ G++ HG + G +
Sbjct: 149 HFTLPFTLKACGELPSYRCGSTFHGLICCNGFE 181
>ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial
[Oryza sativa Japonica Group]
Length = 890
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/93 (40%), Positives = 55/93 (59%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A +AL VL+R++PSP WN LIR + L ++ V C M R G PD
Sbjct: 97 ASYLACGATDYALLVLERVTPSPAV--WWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 154
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P VLKA GE+PS+ G++ HG + G +
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFE 187
>emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/93 (40%), Positives = 55/93 (59%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A +AL VL+R++PSP WN LIR + L ++ V C M R G PD
Sbjct: 104 ASYLACGATDYALLVLERVTPSPAV--WWNLLIREHIKQGRLDSAINVSCRMLRAGTRPD 161
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P VLKA GE+PS+ G++ HG + G +
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFE 194
>ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein
SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A S AL+VL+R+ PSP WN L+R + L +++ V C M R G PD
Sbjct: 91 ASYLACGATSDALSVLERVVPSPAV--WWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P+ LKA GE+PS+ G++ HG + G +
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFE 181
>ref|XP_006654247.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Oryza brachyantha]
Length = 884
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/93 (40%), Positives = 53/93 (56%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YLS +AL VL+R++PSP WN LIR + L ++ V C M R G PD
Sbjct: 91 ASYLSCGVTDYALLVLERVTPSPAV--WWNLLIREHIKQGCLDSAIAVSCRMLRAGTRPD 148
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P VLKA GE+PS+ G + HG + G +
Sbjct: 149 HFTLPHVLKACGELPSYLCGITFHGLICCNGFE 181
>gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A AL+VL+R++PSP WN L+R + L +++ V C M R G PD
Sbjct: 91 ASYLACGATKDALSVLERVTPSPAV--WWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPD 148
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P+ LKA GE+PS+ G ++HG + G +
Sbjct: 149 HFTLPYALKACGELPSYCCGRALHGLICCNGFE 181
>ref|XP_004975518.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like isoform X1 [Setaria italica]
gi|514801211|ref|XP_004975519.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X2 [Setaria italica]
gi|514801214|ref|XP_004975520.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g16860-like isoform X3 [Setaria italica]
Length = 886
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/93 (39%), Positives = 56/93 (60%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A S AL+VL+R++PSP WN LIR + L +++ V C M G PD
Sbjct: 91 ASYLAFGATSDALSVLERVTPSPAV--WWNLLIREHIKEGRLDRAIGVSCRMLHAGTRPD 148
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P+ LKA GE+PS+ G++ HG + G +
Sbjct: 149 HFTLPYTLKACGELPSYRCGSTFHGLICCNGFE 181
>ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 833
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/97 (37%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 16 DLFSAYLSADAPSHALAVLQR-LSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMG 192
+L Y+S+++ ++A+ +L++ ++PS +V WN LIR + + ++R++ M+ +
Sbjct: 62 NLIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLH 121
Query: 193 LSPDCYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+PD YTFPFV KA GEI +F LG S+HG V+ G +
Sbjct: 122 WTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFE 158
>ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa
Japonica Group]
Length = 852
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/93 (39%), Positives = 54/93 (58%)
Frame = +1
Query: 25 SAYLSADAPSHALAVLQRLSPSPDAVDLWNALIRRFVSLSLLQKSVRVYCTMRRMGLSPD 204
++YL+ A +AL VL+R++PSP WN LIR + L ++ V C M R G D
Sbjct: 59 ASYLACGATDYALLVLERVTPSPAV--WWNLLIREHIKQGRLDSAINVSCRMLRAGTRLD 116
Query: 205 CYTFPFVLKATGEIPSFPLGTSVHGSVVA*GLD 303
+T P VLKA GE+PS+ G++ HG + G +
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFE 149