BLASTX nr result

ID: Rheum21_contig00010749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010749
         (920 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535140.1| conserved hypothetical protein [Ricinus comm...    84   7e-24
gb|AGC78906.1| hypothetical protein (mitochondrion) [Vicia faba]...   114   7e-23
gb|EXC13351.1| NADH dehydrogenase [ubiquinone] iron-sulfur prote...    89   3e-15
emb|CBI31099.3| unnamed protein product [Vitis vinifera]               69   3e-09

>ref|XP_002535140.1| conserved hypothetical protein [Ricinus communis]
           gi|223523945|gb|EEF27246.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 114

 Score = 83.6 bits (205), Expect(2) = 7e-24
 Identities = 44/58 (75%), Positives = 47/58 (81%), Gaps = 3/58 (5%)
 Frame = +2

Query: 440 HIEMRVKEASKSEGRAVGHVTCTELVADWAFSFLKGDQLAFLLS---IGRIGPTPRTS 604
           HIEM V+EASKSEGRAVGHV CTELVADWAFS++K DQLAFLLS     R GP  RTS
Sbjct: 24  HIEMWVEEASKSEGRAVGHVICTELVADWAFSWIKADQLAFLLSKSRSNRAGPCLRTS 81



 Score = 54.7 bits (130), Expect(2) = 7e-24
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = +3

Query: 336 MSSPGWSTVRQNRHRLGAIDGTW 404
           MSSPGWSTVRQNRHRLGAIDGTW
Sbjct: 1   MSSPGWSTVRQNRHRLGAIDGTW 23


>gb|AGC78906.1| hypothetical protein (mitochondrion) [Vicia faba]
           gi|442803202|gb|AGC78937.1| hypothetical protein
           (mitochondrion) [Vicia faba] gi|442803285|gb|AGC79020.1|
           hypothetical protein (mitochondrion) [Vicia faba]
          Length = 111

 Score =  114 bits (284), Expect = 7e-23
 Identities = 63/95 (66%), Positives = 66/95 (69%)
 Frame = +2

Query: 590 TPRTSCAPFIY*Y**GKESLNQNHLLRADVVKCLTLLVIVSCCCGRCSFARA*TNLTKKE 769
           TPRTS AP        K S     LLRAD+ KCLTLLVIV CCCG+CSFAR   N T KE
Sbjct: 21  TPRTSRAPKTNKG--NKASTRTTFLLRADLAKCLTLLVIVPCCCGQCSFAR---NPTNKE 75

Query: 770 RMPLGASENDSSRMKGNSHVQFVYFVGGEGARQGP 874
           RMPLGASENDSSRMKGNSHVQFV+F GG      P
Sbjct: 76  RMPLGASENDSSRMKGNSHVQFVFFGGGRSPTGSP 110


>gb|EXC13351.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Morus
           notabilis]
          Length = 275

 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 41/44 (93%), Positives = 41/44 (93%)
 Frame = +3

Query: 273 MVLVRRTVNGFASGLWARRNRMSSPGWSTVRQNRHRLGAIDGTW 404
           MVLVRRTVNGFASGLWA RNRMSSPGWSTV QNRHRLG IDGTW
Sbjct: 1   MVLVRRTVNGFASGLWACRNRMSSPGWSTVCQNRHRLGTIDGTW 44


>emb|CBI31099.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 29/30 (96%)
 Frame = +3

Query: 3   GIQWCNVKRSCDMKTLIAIWGKFPSGNNGS 92
           GIQWCNVKRSCDMKTLIAIWGKFPSGNN S
Sbjct: 157 GIQWCNVKRSCDMKTLIAIWGKFPSGNNAS 186



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 33/39 (84%), Positives = 34/39 (87%)
 Frame = +2

Query: 464 ASKSEGRAVGHVTCTELVADWAFSFLKGDQLAFLLSIGR 580
           ASKSEGRAVGHVTCTELVADWAFS +K D LAFLLS  R
Sbjct: 185 ASKSEGRAVGHVTCTELVADWAFSLIKADPLAFLLSKSR 223


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