BLASTX nr result
ID: Rheum21_contig00010740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00010740
(239 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [... 73 4e-11
ref|XP_003536695.1| PREDICTED: TATA-binding protein-associated f... 72 6e-11
ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Popu... 72 1e-10
ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein ... 71 1e-10
gb|ESW14878.1| hypothetical protein PHAVU_007G025100g, partial [... 71 1e-10
ref|XP_006361692.1| PREDICTED: heterogeneous nuclear ribonucleop... 70 4e-10
ref|XP_006364446.1| PREDICTED: TATA-binding protein-associated f... 69 5e-10
ref|XP_003555886.1| PREDICTED: glycine-rich RNA-binding protein ... 69 5e-10
gb|ACU23136.1| unknown [Glycine max] 69 5e-10
ref|XP_006392135.1| hypothetical protein EUTSA_v10023624mg [Eutr... 69 6e-10
ref|XP_002315330.1| glycine-rich RNA-binding family protein [Pop... 69 6e-10
ref|XP_004250041.1| PREDICTED: uncharacterized protein LOC101265... 69 8e-10
gb|EOY18829.1| RNA-binding family protein with retrovirus zinc f... 68 1e-09
gb|EOY18828.1| RNA-binding family protein with retrovirus zinc f... 68 1e-09
ref|XP_004497120.1| PREDICTED: TATA-binding protein-associated f... 68 1e-09
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop... 68 1e-09
ref|XP_004234911.1| PREDICTED: uncharacterized protein LOC101261... 67 2e-09
ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202... 66 4e-09
ref|NP_564759.1| RNA-binding protein RZ-1B [Arabidopsis thaliana... 65 9e-09
ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arab... 65 1e-08
>ref|XP_002533374.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223526781|gb|EEF29005.1| glycine-rich RNA-binding
protein, putative [Ricinus communis]
Length = 276
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSWDVTERQLE+AF R+GKIV+C++M+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWDVTERQLENAFNRYGKIVECQVMLERDT 44
>ref|XP_003536695.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X1 [Glycine max]
Length = 279
Score = 72.4 bits (176), Expect = 6e-11
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MAAK+ ENR+FVGGLSWDVTERQLE AF R+GKI++C+IM+ER T
Sbjct: 1 MAAKE-ENRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDT 44
>ref|XP_002311989.2| hypothetical protein POPTR_0008s03290g [Populus trichocarpa]
gi|550332329|gb|EEE89356.2| hypothetical protein
POPTR_0008s03290g [Populus trichocarpa]
Length = 279
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/45 (71%), Positives = 41/45 (91%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
M+ K+ ENR+FVGGLSWD+TERQLE+AF RFGKIV+C++M+ER T
Sbjct: 1 MSGKE-ENRIFVGGLSWDITERQLENAFDRFGKIVECQVMLERDT 44
>ref|XP_006485577.1| PREDICTED: glycine-rich RNA-binding protein 10-like isoform X1
[Citrus sinensis]
Length = 280
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/43 (76%), Positives = 40/43 (93%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVER 8
MA KD ENR+FVGGLSW+VTERQLE+AF RFGKI++C+IM+ER
Sbjct: 1 MAGKD-ENRIFVGGLSWNVTERQLENAFDRFGKIIECQIMLER 42
>gb|ESW14878.1| hypothetical protein PHAVU_007G025100g, partial [Phaseolus
vulgaris]
Length = 117
Score = 71.2 bits (173), Expect = 1e-10
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MAAK+ +NR+FVGGLSWDVTERQLE AF R+GKI++C+IM+ER T
Sbjct: 1 MAAKE-DNRIFVGGLSWDVTERQLEHAFARYGKILECQIMMERDT 44
>ref|XP_006361692.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Solanum
tuberosum]
Length = 331
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
M+ KD + R+FVGGL+WDVT+RQLE AF R+GKI+DC++M+ER T
Sbjct: 1 MSGKDHDYRIFVGGLAWDVTDRQLEGAFGRYGKIIDCQVMLERDT 45
>ref|XP_006364446.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X1 [Solanum tuberosum]
Length = 271
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/45 (68%), Positives = 38/45 (84%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
M+ K + R+FVGGLSWDVTERQLEDAF FGKIVDC++M++R T
Sbjct: 1 MSGKVQDYRIFVGGLSWDVTERQLEDAFSPFGKIVDCQVMLDRDT 45
>ref|XP_003555886.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
isoform X1 [Glycine max]
Length = 279
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSW+VTERQLE AF R+GKI++C+IM+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDT 44
>gb|ACU23136.1| unknown [Glycine max]
Length = 279
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSW+VTERQLE AF R+GKI++C+IM+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWEVTERQLEHAFARYGKILECQIMMERDT 44
>ref|XP_006392135.1| hypothetical protein EUTSA_v10023624mg [Eutrema salsugineum]
gi|557088641|gb|ESQ29421.1| hypothetical protein
EUTSA_v10023624mg [Eutrema salsugineum]
Length = 290
Score = 68.9 bits (167), Expect = 6e-10
Identities = 28/41 (68%), Positives = 37/41 (90%)
Frame = -2
Query: 124 DIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
+++NR+FVGGLSWDVTERQLED F R+GKI++C+IMV + T
Sbjct: 9 NLDNRIFVGGLSWDVTERQLEDTFERYGKIIECQIMVGKDT 49
>ref|XP_002315330.1| glycine-rich RNA-binding family protein [Populus trichocarpa]
gi|222864370|gb|EEF01501.1| glycine-rich RNA-binding
family protein [Populus trichocarpa]
Length = 280
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/45 (71%), Positives = 40/45 (88%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSWD+TERQLE+AF RFGKIV+ ++M+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWDITERQLENAFDRFGKIVESQVMLERDT 44
>ref|XP_004250041.1| PREDICTED: uncharacterized protein LOC101265498 [Solanum
lycopersicum]
Length = 317
Score = 68.6 bits (166), Expect = 8e-10
Identities = 28/45 (62%), Positives = 39/45 (86%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
M+ KD + R+FVGGL+WDVT+RQLE AF R+GKI+DC++M++R T
Sbjct: 1 MSGKDHDYRIFVGGLAWDVTDRQLEGAFGRYGKIIDCQVMLDRDT 45
>gb|EOY18829.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 2 [Theobroma cacao]
Length = 265
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSWDVTERQLE AF RFGKI++ +IM+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWDVTERQLEHAFSRFGKILESQIMLERDT 44
>gb|EOY18828.1| RNA-binding family protein with retrovirus zinc finger-like domain
isoform 1 [Theobroma cacao]
Length = 276
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSWDVTERQLE AF RFGKI++ +IM+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWDVTERQLEHAFSRFGKILESQIMLERDT 44
>ref|XP_004497120.1| PREDICTED: TATA-binding protein-associated factor 2N-like isoform
X1 [Cicer arietinum]
Length = 279
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/45 (68%), Positives = 40/45 (88%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
M+ K+ +NR+FVGGLSWDVTERQLE AF R+GKI++C+IM+ER T
Sbjct: 1 MSGKE-DNRIFVGGLSWDVTERQLEHAFDRYGKILECQIMMERDT 44
>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis
vinifera]
Length = 278
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA K+ ENR+FVGGLSWDVTERQLE+ F RFGKI++ +IM+ER T
Sbjct: 1 MAGKE-ENRIFVGGLSWDVTERQLENTFSRFGKIIESQIMLERDT 44
>ref|XP_004234911.1| PREDICTED: uncharacterized protein LOC101261205 [Solanum
lycopersicum]
Length = 271
Score = 67.0 bits (162), Expect = 2e-09
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
M+ K + R+FVGGLSWDVTE QLEDAF FGKIVDC++M++R T
Sbjct: 1 MSGKVQDCRIFVGGLSWDVTEHQLEDAFSPFGKIVDCQVMLDRDT 45
>ref|XP_004142412.1| PREDICTED: uncharacterized protein LOC101202917 [Cucumis sativus]
gi|449487254|ref|XP_004157539.1| PREDICTED:
uncharacterized protein LOC101231083 [Cucumis sativus]
Length = 286
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/45 (66%), Positives = 39/45 (86%)
Frame = -2
Query: 136 MAAKDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
MA ++ E R+FVGGLSWD+TERQLE+AF RFGKI+D +IM+E+ T
Sbjct: 1 MAGRE-EYRIFVGGLSWDITERQLENAFNRFGKIIDSQIMLEKNT 44
>ref|NP_564759.1| RNA-binding protein RZ-1B [Arabidopsis thaliana]
gi|30696446|ref|NP_849832.1| RNA-binding protein RZ-1B
[Arabidopsis thaliana] gi|2462758|gb|AAB71977.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|21593771|gb|AAM65738.1| RNA binding protein, putative
[Arabidopsis thaliana] gi|26983818|gb|AAN86161.1|
putative glycine-rich RNA binding protein [Arabidopsis
thaliana] gi|62321068|dbj|BAD94150.1| putative
RNA-binding protein [Arabidopsis thaliana]
gi|332195593|gb|AEE33714.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332195594|gb|AEE33715.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 65.1 bits (157), Expect = 9e-09
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = -2
Query: 124 DIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
++E+R+FVGGLSWDVTERQLE F R+GKI +C+IMV R T
Sbjct: 9 NLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDT 49
>ref|XP_002888127.1| hypothetical protein ARALYDRAFT_315285 [Arabidopsis lyrata subsp.
lyrata] gi|297333968|gb|EFH64386.1| hypothetical protein
ARALYDRAFT_315285 [Arabidopsis lyrata subsp. lyrata]
Length = 286
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/42 (64%), Positives = 36/42 (85%)
Frame = -2
Query: 127 KDIENRVFVGGLSWDVTERQLEDAFRRFGKIVDCEIMVERGT 2
+++E+R+FVGGLSWDVTERQLE F R+GKI +C+IMV + T
Sbjct: 8 RNLESRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGKDT 49