BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010642
         (800 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006289254.1| hypothetical protein CARUB_v10002720mg [Caps...    57   1e-05

>ref|XP_006289254.1| hypothetical protein CARUB_v10002720mg [Capsella rubella]
           gi|482557960|gb|EOA22152.1| hypothetical protein
           CARUB_v10002720mg [Capsella rubella]
          Length = 371

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
 Frame = -3

Query: 798 SNGLIL---SNFEGSSRPRFGLCVWNPLTRHCVRIPNPKPL-------LHPSFVYT---L 658
           ++G++L      EGS     G    NPL +  V+IP P  L       L  + +++   L
Sbjct: 48  TDGIVLLYSETLEGSPMYHVG----NPLLQQWVQIPLPPHLTVFDVVRLQENKLFSDTGL 103

Query: 657 APRREAAAFLTYKVVALRTHCL---RPATAIFSSDTGRWVTWNPSRPGNGSLPLL---HK 496
             + E    + YKVV +   C+   R    ++SS+TG W T +       SL +L     
Sbjct: 104 VTKMEKGIVVGYKVVWMLASCIVSTRLTFLVYSSETGVWETKDVH-----SLRVLIWFRL 158

Query: 495 RGGFAYKGVLHWLIA-----EQGTVLTYDPYNSPDRFDRFPLPKVKHEKSSLVY----SG 343
           +   +  G+LHWL +     +   VL+YD YN  D     P P ++    S  +    S 
Sbjct: 159 KYSVSLNGILHWLSSYGNNIDASHVLSYDFYNGGDVCHTIPFPDIQEHLQSRSFKRTIST 218

Query: 342 EEEAPMYCEVESNCSSRPGFDRVSLWRL 259
            E   +YC V    SS  GF  + +WRL
Sbjct: 219 SEGFVVYCNVS---SSYNGFPTIKVWRL 243