BLASTX nr result

ID: Rheum21_contig00010405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010405
         (1057 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY06175.1| TLD-domain containing nucleolar protein, putative...    60   2e-06
gb|EOY06174.1| TLD-domain containing nucleolar protein, putative...    60   2e-06
gb|EOY06173.1| TLD-domain containing nucleolar protein, putative...    60   2e-06

>gb|EOY06175.1| TLD-domain containing nucleolar protein, putative isoform 3
           [Theobroma cacao]
          Length = 296

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 30/158 (18%)
 Frame = -3

Query: 395 MYSLKEKVTGKISSFLADXXXXXXXXXXXXXRY-----KGRNALSSIFSFALPSASLNGK 231
           MY+LK+KV G +S   AD                    KG  +LSS+FSF +PSASL G 
Sbjct: 1   MYTLKDKVAGSLSRLFADSPNHSSASSPSDLSQARWYSKGSKSLSSVFSFIIPSASLGGS 60

Query: 230 KSDKSQGFLKSIQS-PARYTS----LQDDFLSCHAEQTP----------CEDKRGQ---- 108
           KS+     LK IQS P R+ +    +QDD L    E T           C+DK+      
Sbjct: 61  KSNDHD--LKPIQSHPVRWKNKTFEVQDDPLDRCEEYTDIYTSEDIKKVCQDKKSNWTDN 118

Query: 107 ------NPQEENEVSCSKRPINASEMFEDAVKPQNEVK 12
                 +P+ E +   S+R  + S+ F++A + Q+ VK
Sbjct: 119 DIKQTVSPRGEEKDRASERSSSDSDEFQEAREQQSPVK 156


>gb|EOY06174.1| TLD-domain containing nucleolar protein, putative isoform 2
           [Theobroma cacao]
          Length = 353

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 30/158 (18%)
 Frame = -3

Query: 395 MYSLKEKVTGKISSFLADXXXXXXXXXXXXXRY-----KGRNALSSIFSFALPSASLNGK 231
           MY+LK+KV G +S   AD                    KG  +LSS+FSF +PSASL G 
Sbjct: 1   MYTLKDKVAGSLSRLFADSPNHSSASSPSDLSQARWYSKGSKSLSSVFSFIIPSASLGGS 60

Query: 230 KSDKSQGFLKSIQS-PARYTS----LQDDFLSCHAEQTP----------CEDKRGQ---- 108
           KS+     LK IQS P R+ +    +QDD L    E T           C+DK+      
Sbjct: 61  KSNDHD--LKPIQSHPVRWKNKTFEVQDDPLDRCEEYTDIYTSEDIKKVCQDKKSNWTDN 118

Query: 107 ------NPQEENEVSCSKRPINASEMFEDAVKPQNEVK 12
                 +P+ E +   S+R  + S+ F++A + Q+ VK
Sbjct: 119 DIKQTVSPRGEEKDRASERSSSDSDEFQEAREQQSPVK 156


>gb|EOY06173.1| TLD-domain containing nucleolar protein, putative isoform 1
           [Theobroma cacao]
          Length = 335

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 52/158 (32%), Positives = 74/158 (46%), Gaps = 30/158 (18%)
 Frame = -3

Query: 395 MYSLKEKVTGKISSFLADXXXXXXXXXXXXXRY-----KGRNALSSIFSFALPSASLNGK 231
           MY+LK+KV G +S   AD                    KG  +LSS+FSF +PSASL G 
Sbjct: 1   MYTLKDKVAGSLSRLFADSPNHSSASSPSDLSQARWYSKGSKSLSSVFSFIIPSASLGGS 60

Query: 230 KSDKSQGFLKSIQS-PARYTS----LQDDFLSCHAEQTP----------CEDKRGQ---- 108
           KS+     LK IQS P R+ +    +QDD L    E T           C+DK+      
Sbjct: 61  KSNDHD--LKPIQSHPVRWKNKTFEVQDDPLDRCEEYTDIYTSEDIKKVCQDKKSNWTDN 118

Query: 107 ------NPQEENEVSCSKRPINASEMFEDAVKPQNEVK 12
                 +P+ E +   S+R  + S+ F++A + Q+ VK
Sbjct: 119 DIKQTVSPRGEEKDRASERSSSDSDEFQEAREQQSPVK 156


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