BLASTX nr result

ID: Rheum21_contig00010322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010322
         (526 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42552.1|S1FA_SPIOL RecName: Full=DNA-binding protein S1FA gi...    57   3e-06
ref|XP_002326341.1| predicted protein [Populus trichocarpa]            57   3e-06
ref|XP_006381480.1| DNA-binding protein S1FA3 [Populus trichocar...    56   4e-06
ref|XP_006410892.1| hypothetical protein EUTSA_v10017496mg [Eutr...    55   1e-05

>sp|P42552.1|S1FA_SPIOL RecName: Full=DNA-binding protein S1FA gi|498705|emb|CAA56077.1|
           s1Fa [Spinacia oleracea]
          Length = 70

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 32/66 (48%), Positives = 34/66 (51%)
 Frame = -2

Query: 387 EAEVKGLNPXXXXXXXXXXXXVTFLVANYALYAYAQKTLXXXXXXXXXXXXXXRERLKQG 208
           E E KGLNP            +TFLV N+ LY YAQK L              RERLKQG
Sbjct: 5   EVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLKQG 64

Query: 207 VAPPGE 190
           VAPPGE
Sbjct: 65  VAPPGE 70


>ref|XP_002326341.1| predicted protein [Populus trichocarpa]
          Length = 88

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/66 (46%), Positives = 36/66 (54%)
 Frame = -2

Query: 387 EAEVKGLNPXXXXXXXXXXXXVTFLVANYALYAYAQKTLXXXXXXXXXXXXXXRERLKQG 208
           +AE KGLNP            +TFLV NY LY+YAQKTL              +ERLKQG
Sbjct: 23  DAEPKGLNPGLIVLLVIGGLLLTFLVGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQG 82

Query: 207 VAPPGE 190
           V+ PGE
Sbjct: 83  VSAPGE 88


>ref|XP_006381480.1| DNA-binding protein S1FA3 [Populus trichocarpa]
           gi|118481714|gb|ABK92797.1| unknown [Populus
           trichocarpa] gi|550336183|gb|ERP59277.1| DNA-binding
           protein S1FA3 [Populus trichocarpa]
          Length = 88

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/66 (45%), Positives = 36/66 (54%)
 Frame = -2

Query: 387 EAEVKGLNPXXXXXXXXXXXXVTFLVANYALYAYAQKTLXXXXXXXXXXXXXXRERLKQG 208
           +AE KGLNP            +TFL+ NY LY+YAQKTL              +ERLKQG
Sbjct: 23  DAEPKGLNPGLIVLLVIGGLLLTFLIGNYVLYSYAQKTLPPRKKKPISKKKMKKERLKQG 82

Query: 207 VAPPGE 190
           V+ PGE
Sbjct: 83  VSAPGE 88


>ref|XP_006410892.1| hypothetical protein EUTSA_v10017496mg [Eutrema salsugineum]
           gi|557112061|gb|ESQ52345.1| hypothetical protein
           EUTSA_v10017496mg [Eutrema salsugineum]
          Length = 76

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/68 (47%), Positives = 35/68 (51%)
 Frame = -2

Query: 393 KLEAEVKGLNPXXXXXXXXXXXXVTFLVANYALYAYAQKTLXXXXXXXXXXXXXXRERLK 214
           K  AE KGLNP            VTFL+ANY +Y YAQKTL              RE+LK
Sbjct: 9   KAAAEAKGLNPGLIVLLVVGGLLVTFLIANYVMYMYAQKTLPPKKKKPISKKKLKREKLK 68

Query: 213 QGVAPPGE 190
           QGV  PGE
Sbjct: 69  QGVPVPGE 76


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