BLASTX nr result
ID: Rheum21_contig00010142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00010142
(1430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 69 3e-20
gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein... 70 6e-20
gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily p... 70 6e-20
ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subun... 68 1e-19
ref|XP_006836206.1| hypothetical protein AMTR_s00101p00084550 [A... 65 3e-19
gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus nota... 66 3e-19
ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun... 70 3e-19
ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun... 70 3e-19
ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun... 70 3e-19
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 69 4e-19
ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subun... 68 4e-19
ref|XP_004968633.1| PREDICTED: cleavage stimulation factor subun... 68 4e-19
ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subun... 70 5e-19
ref|XP_004165244.1| PREDICTED: cleavage stimulation factor subun... 70 5e-19
ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subun... 66 2e-18
ref|XP_002303484.1| suppressor of forked family protein [Populus... 69 4e-18
ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medica... 68 4e-18
ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 67 5e-18
gb|EPS60767.1| hypothetical protein M569_14035, partial [Genlise... 66 5e-18
gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus... 66 1e-17
>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
gi|297736046|emb|CBI24084.3| unnamed protein product
[Vitis vinifera]
Length = 769
Score = 69.3 bits (168), Expect(2) = 3e-20
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+W+QY+EAQMAVNN++ATKQIFSR LLNC+ IPLW
Sbjct: 59 AKYWRQYLEAQMAVNNDEATKQIFSRCLLNCFQIPLW 95
Score = 57.4 bits (137), Expect(2) = 3e-20
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR NEKKGV+G EETRKA DFM+N+VG
Sbjct: 96 RCYIRFIRKVNEKKGVEGQEETRKAFDFMLNFVG 129
>gb|EOY19416.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao]
Length = 761
Score = 70.5 bits (171), Expect(2) = 6e-20
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+W+QYVEAQMAVNN+DATKQIFSR LLNC IPLW
Sbjct: 42 AKYWRQYVEAQMAVNNDDATKQIFSRCLLNCLQIPLW 78
Score = 55.5 bits (132), Expect(2) = 6e-20
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+KKGV+G EETRKA DFM+ YVG
Sbjct: 79 RCYIRFIRKVNDKKGVEGQEETRKAFDFMLGYVG 112
>gb|EOY19418.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3
[Theobroma cacao]
Length = 755
Score = 70.5 bits (171), Expect(2) = 6e-20
Identities = 31/37 (83%), Positives = 34/37 (91%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+W+QYVEAQMAVNN+DATKQIFSR LLNC IPLW
Sbjct: 42 AKYWRQYVEAQMAVNNDDATKQIFSRCLLNCLQIPLW 78
Score = 55.5 bits (132), Expect(2) = 6e-20
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+KKGV+G EETRKA DFM+ YVG
Sbjct: 79 RCYIRFIRKVNDKKGVEGQEETRKAFDFMLGYVG 112
>ref|XP_006604052.1| PREDICTED: cleavage stimulation factor subunit 3-like [Glycine max]
Length = 739
Score = 68.2 bits (165), Expect(2) = 1e-19
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AKFW+QYVEA MA NN+DATKQIFSR LLNC IPLW
Sbjct: 45 AKFWRQYVEAHMAANNDDATKQIFSRCLLNCLQIPLW 81
Score = 56.6 bits (135), Expect(2) = 1e-19
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+KKG++G EETRKA DFM+NYVG
Sbjct: 82 RCYIRFIRKVNDKKGMEGQEETRKAFDFMLNYVG 115
>ref|XP_006836206.1| hypothetical protein AMTR_s00101p00084550 [Amborella trichopoda]
gi|548838706|gb|ERM99059.1| hypothetical protein
AMTR_s00101p00084550 [Amborella trichopoda]
Length = 790
Score = 65.5 bits (158), Expect(2) = 3e-19
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AKFWKQYVEA MA NN+DATKQIFSR LLNC I LW
Sbjct: 60 AKFWKQYVEAVMAANNDDATKQIFSRCLLNCLQIALW 96
Score = 58.2 bits (139), Expect(2) = 3e-19
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +1
Query: 700 LTLSCRRCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
L ++ RCYI FIR NEKKG +G EETRKA DFM+NYVG
Sbjct: 91 LQIALWRCYIRFIRKVNEKKGTEGQEETRKAFDFMLNYVG 130
>gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus notabilis]
Length = 782
Score = 65.9 bits (159), Expect(2) = 3e-19
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVE MAVNN+DATK IFSR LLNC +PLW
Sbjct: 62 AKYWKQYVEGHMAVNNDDATKHIFSRCLLNCLQVPLW 98
Score = 57.8 bits (138), Expect(2) = 3e-19
Identities = 26/34 (76%), Positives = 30/34 (88%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR AN+KKGV+G EETRKA DFM++YVG
Sbjct: 99 RCYIRFIRNANDKKGVEGQEETRKAFDFMLSYVG 132
>ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Solanum tuberosum] gi|565380421|ref|XP_006356599.1|
PREDICTED: cleavage stimulation factor subunit 3-like
isoform X2 [Solanum tuberosum]
gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage
stimulation factor subunit 3-like isoform X3 [Solanum
tuberosum]
Length = 741
Score = 69.7 bits (169), Expect(2) = 3e-19
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA MAVNN+DATKQIFSR LLNC IPLW
Sbjct: 40 AKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLW 76
Score = 53.9 bits (128), Expect(2) = 3e-19
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+K+G +G EETRKA DFM+NYVG
Sbjct: 77 RCYIRFIRKVNDKRGNEGQEETRKAFDFMLNYVG 110
>ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1
[Solanum lycopersicum]
Length = 741
Score = 69.7 bits (169), Expect(2) = 3e-19
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA MAVNN+DATKQIFSR LLNC IPLW
Sbjct: 40 AKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLW 76
Score = 53.9 bits (128), Expect(2) = 3e-19
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+K+G +G EETRKA DFM+NYVG
Sbjct: 77 RCYIRFIRKVNDKRGNEGQEETRKAFDFMLNYVG 110
>ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2
[Solanum lycopersicum]
Length = 734
Score = 69.7 bits (169), Expect(2) = 3e-19
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA MAVNN+DATKQIFSR LLNC IPLW
Sbjct: 40 AKYWKQYVEAHMAVNNDDATKQIFSRCLLNCLQIPLW 76
Score = 53.9 bits (128), Expect(2) = 3e-19
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+K+G +G EETRKA DFM+NYVG
Sbjct: 77 RCYIRFIRKVNDKRGNEGQEETRKAFDFMLNYVG 110
>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
gi|223541464|gb|EEF43014.1| plant RNA cleavage
stimulation factor, putative [Ricinus communis]
Length = 767
Score = 68.9 bits (167), Expect(2) = 4e-19
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AKFWKQYVEA MAVNN+DAT+QIFSR LLNC +PLW
Sbjct: 60 AKFWKQYVEAYMAVNNDDATRQIFSRCLLNCLQVPLW 96
Score = 54.3 bits (129), Expect(2) = 4e-19
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N++KGV+G EETRKA DFM+ YVG
Sbjct: 97 RCYIRFIRKVNDRKGVEGQEETRKAFDFMLGYVG 130
>ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Setaria italica]
Length = 755
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA MA NN+DATKQIFSR LLNC HI LW
Sbjct: 58 AKYWKQYVEAYMATNNDDATKQIFSRCLLNCLHISLW 94
Score = 55.5 bits (132), Expect(2) = 4e-19
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1
Query: 700 LTLSCRRCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
L +S RCYI FIR N+K+G +GL+ET+KA DFM+NYVG
Sbjct: 89 LHISLWRCYINFIRRINDKRGSEGLDETKKAFDFMLNYVG 128
>ref|XP_004968633.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2
[Setaria italica]
Length = 753
Score = 67.8 bits (164), Expect(2) = 4e-19
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA MA NN+DATKQIFSR LLNC HI LW
Sbjct: 58 AKYWKQYVEAYMATNNDDATKQIFSRCLLNCLHISLW 94
Score = 55.5 bits (132), Expect(2) = 4e-19
Identities = 25/40 (62%), Positives = 32/40 (80%)
Frame = +1
Query: 700 LTLSCRRCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
L +S RCYI FIR N+K+G +GL+ET+KA DFM+NYVG
Sbjct: 89 LHISLWRCYINFIRRINDKRGSEGLDETKKAFDFMLNYVG 128
>ref|XP_004144686.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
sativus]
Length = 871
Score = 70.1 bits (170), Expect(2) = 5e-19
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA M VNN+DAT+QIFSR LLNC HIPLW
Sbjct: 164 AKYWKQYVEAHMVVNNDDATRQIFSRCLLNCLHIPLW 200
Score = 52.8 bits (125), Expect(2) = 5e-19
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVGL 822
RCYI FI+ NE+KG++G EETRKA DFM++Y+G+
Sbjct: 201 RCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLGV 235
>ref|XP_004165244.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
sativus]
Length = 340
Score = 70.1 bits (170), Expect(2) = 5e-19
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEA M VNN+DAT+QIFSR LLNC HIPLW
Sbjct: 112 AKYWKQYVEAHMVVNNDDATRQIFSRCLLNCLHIPLW 148
Score = 52.8 bits (125), Expect(2) = 5e-19
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVGL 822
RCYI FI+ NE+KG++G EETRKA DFM++Y+G+
Sbjct: 149 RCYIRFIKKVNERKGMEGQEETRKAFDFMLSYLGV 183
>ref|XP_004300057.1| PREDICTED: cleavage stimulation factor subunit 3-like [Fragaria
vesca subsp. vesca]
Length = 762
Score = 66.2 bits (160), Expect(2) = 2e-18
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AK+WKQYVEAQ+AVNN+DATKQIFSR LL C +PLW
Sbjct: 56 AKYWKQYVEAQIAVNNDDATKQIFSRCLLICLQVPLW 92
Score = 54.7 bits (130), Expect(2) = 2e-18
Identities = 24/34 (70%), Positives = 29/34 (85%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+K+GV+G EETRKA DFM++YVG
Sbjct: 93 RCYIRFIRKVNDKRGVEGQEETRKAFDFMLSYVG 126
>ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa]
gi|222840916|gb|EEE78463.1| suppressor of forked family
protein [Populus trichocarpa]
Length = 769
Score = 68.9 bits (167), Expect(2) = 4e-18
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
+KFWKQY EA MAVNN+DA KQIFSR LLNC HIPLW
Sbjct: 62 SKFWKQYAEAHMAVNNDDAIKQIFSRCLLNCLHIPLW 98
Score = 50.8 bits (120), Expect(2) = 4e-18
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR NEKKG G +E RKA DFM+ YVG
Sbjct: 99 RCYIRFIRKVNEKKGADGQDEIRKAFDFMLGYVG 132
>ref|XP_003618920.1| mRNA 3'-end-processing protein rna14 [Medicago truncatula]
gi|355493935|gb|AES75138.1| mRNA 3'-end-processing
protein rna14 [Medicago truncatula]
Length = 737
Score = 68.2 bits (165), Expect(2) = 4e-18
Identities = 30/37 (81%), Positives = 32/37 (86%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AKFWKQYVEA MAVNN+DA KQIFSR LLNC +PLW
Sbjct: 40 AKFWKQYVEAHMAVNNDDAIKQIFSRCLLNCLQVPLW 76
Score = 51.6 bits (122), Expect(2) = 4e-18
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+KKG +G EET+KA +FM++YVG
Sbjct: 77 RCYIRFIRKVNDKKGAEGQEETKKAFEFMLSYVG 110
>ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cicer arietinum]
Length = 755
Score = 67.0 bits (162), Expect(2) = 5e-18
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AKFWKQYVEA M VNN+DA KQIFSR LLNC +PLW
Sbjct: 51 AKFWKQYVEAHMTVNNDDAVKQIFSRCLLNCLQVPLW 87
Score = 52.4 bits (124), Expect(2) = 5e-18
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
R YI FIR N+KKG +G EETRKA DFM+NYVG
Sbjct: 88 RSYIRFIRKVNDKKGTEGQEETRKAFDFMLNYVG 121
>gb|EPS60767.1| hypothetical protein M569_14035, partial [Genlisea aurea]
Length = 173
Score = 66.2 bits (160), Expect(2) = 5e-18
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
+KFWKQYVEA MAVNN++AT+QIFSR LL C H+PLW
Sbjct: 36 SKFWKQYVEAHMAVNNDEATRQIFSRCLLICLHVPLW 72
Score = 53.1 bits (126), Expect(2) = 5e-18
Identities = 22/35 (62%), Positives = 30/35 (85%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVGL 822
RCY+ FIR N+KKG++G EET+KA +FM+NYVG+
Sbjct: 73 RCYMHFIRKVNDKKGLEGQEETKKAFEFMLNYVGV 107
>gb|ESW23484.1| hypothetical protein PHAVU_004G051000g [Phaseolus vulgaris]
Length = 738
Score = 66.2 bits (160), Expect(2) = 1e-17
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +3
Query: 510 AKFWKQYVEAQMAVNNNDATKQIFSRYLLNCYHIPLW 620
AKFW+QYVEA MA NN+DATKQIFSR LL+C IPLW
Sbjct: 45 AKFWRQYVEAHMATNNDDATKQIFSRCLLHCLQIPLW 81
Score = 51.6 bits (122), Expect(2) = 1e-17
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +1
Query: 718 RCYICFIRTANEKKGVKGLEETRKASDFMINYVG 819
RCYI FIR N+KKG++G EETRKA +FM+N VG
Sbjct: 82 RCYIRFIRKVNDKKGMEGQEETRKAFEFMLNCVG 115