BLASTX nr result

ID: Rheum21_contig00010073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00010073
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138383.1| PREDICTED: 60S ribosomal protein L3-like [Cu...   129   3e-28
dbj|BAA83471.1| Csf-3 [Cucumis sativus]                               129   3e-28
ref|XP_004504742.1| PREDICTED: 60S ribosomal protein L3-like [Ci...   128   9e-28
gb|AFK39429.1| unknown [Lotus japonicus]                              128   9e-28
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   128   9e-28
gb|ESW05849.1| hypothetical protein PHAVU_011G214700g [Phaseolus...   127   2e-27
ref|XP_002306708.1| ribosomal protein 1 [Populus trichocarpa] gi...   126   3e-27
gb|AFK34755.1| unknown [Lotus japonicus]                              126   3e-27
emb|CBI18223.3| unnamed protein product [Vitis vinifera]              126   3e-27
ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vi...   126   3e-27
emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]   126   3e-27
gb|EXC12323.1| 60S ribosomal protein L3 [Morus notabilis]             125   6e-27
gb|AGV54431.1| 60S ribosomal protein L3-like protein [Phaseolus ...   125   6e-27
gb|EOY16774.1| Ribosomal protein 1 [Theobroma cacao]                  125   6e-27
ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula] g...   125   6e-27
ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula] g...   125   6e-27
gb|EMS50040.1| 60S ribosomal protein L3 [Triticum urartu]             125   8e-27
ref|NP_001275276.1| 60S ribosomal protein L3-like [Solanum tuber...   125   8e-27
ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3 [Glycine...   125   8e-27
gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum] gi|11...   125   8e-27

>ref|XP_004138383.1| PREDICTED: 60S ribosomal protein L3-like [Cucumis sativus]
           gi|449499176|ref|XP_004160742.1| PREDICTED: 60S
           ribosomal protein L3-like [Cucumis sativus]
          Length = 389

 Score =  129 bits (325), Expect = 3e-28
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKGGCVGPKKRV+TLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           +GRLKA
Sbjct: 384 FGRLKA 389


>dbj|BAA83471.1| Csf-3 [Cucumis sativus]
          Length = 219

 Score =  129 bits (325), Expect = 3e-28
 Identities = 63/66 (95%), Positives = 65/66 (98%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKGGCVGPKKRV+TLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 154 DYLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 213

Query: 51  YGRLKA 34
           +GRLKA
Sbjct: 214 FGRLKA 219


>ref|XP_004504742.1| PREDICTED: 60S ribosomal protein L3-like [Cicer arietinum]
          Length = 389

 Score =  128 bits (321), Expect = 9e-28
 Identities = 63/66 (95%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKGGCVGPKKRVVTLRQSLLKQTSR ALE+I LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRSALEDIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>gb|AFK39429.1| unknown [Lotus japonicus]
          Length = 350

 Score =  128 bits (321), Expect = 9e-28
 Identities = 62/66 (93%), Positives = 65/66 (98%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           D+LMIKGGCVGPKKRV+TLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQ+TQEKQKF
Sbjct: 285 DFLMIKGGCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQSTQEKQKF 344

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 345 YGRLKA 350


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
           gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 389

 Score =  128 bits (321), Expect = 9e-28
 Identities = 64/66 (96%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKG CVGPKKRVVTLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>gb|ESW05849.1| hypothetical protein PHAVU_011G214700g [Phaseolus vulgaris]
          Length = 463

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DY+M+KG CVGPKKRVVTLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 398 DYIMVKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 457

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 458 YGRLKA 463


>ref|XP_002306708.1| ribosomal protein 1 [Populus trichocarpa]
           gi|118481111|gb|ABK92509.1| unknown [Populus
           trichocarpa] gi|222856157|gb|EEE93704.1| ribosomal
           protein 1 [Populus trichocarpa]
          Length = 389

 Score =  126 bits (317), Expect = 3e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKG CVGPKKRVVTLRQSLLKQTSR+ALEEI LKF+DTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFVDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>gb|AFK34755.1| unknown [Lotus japonicus]
          Length = 173

 Score =  126 bits (316), Expect = 3e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           D+LMIKGGCVGPKKRVVTLRQSLL QTSRVALEEI LKFIDTSSKFGHGRFQ+TQEKQKF
Sbjct: 108 DFLMIKGGCVGPKKRVVTLRQSLLTQTSRVALEEIKLKFIDTSSKFGHGRFQSTQEKQKF 167

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 168 YGRLKA 173


>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
          Length = 449

 Score =  126 bits (316), Expect = 3e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DY+MIKG CVGPKKRVVTLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 384 DYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 443

Query: 51  YGRLKA 34
           YGR+KA
Sbjct: 444 YGRMKA 449


>ref|XP_002265125.1| PREDICTED: 60S ribosomal protein L3-like [Vitis vinifera]
          Length = 397

 Score =  126 bits (316), Expect = 3e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DY+MIKG CVGPKKRVVTLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 332 DYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 391

Query: 51  YGRLKA 34
           YGR+KA
Sbjct: 392 YGRMKA 397


>emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
          Length = 389

 Score =  126 bits (316), Expect = 3e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DY+MIKG CVGPKKRVVTLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYVMIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGR+KA
Sbjct: 384 YGRMKA 389


>gb|EXC12323.1| 60S ribosomal protein L3 [Morus notabilis]
          Length = 410

 Score =  125 bits (314), Expect = 6e-27
 Identities = 62/66 (93%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           D+L+IKG CVGPKKRVVTLRQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 345 DFLLIKGCCVGPKKRVVTLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 404

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 405 YGRLKA 410


>gb|AGV54431.1| 60S ribosomal protein L3-like protein [Phaseolus vulgaris]
          Length = 389

 Score =  125 bits (314), Expect = 6e-27
 Identities = 61/66 (92%), Positives = 63/66 (95%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DY+M+KG CVGPKKRVVT RQSLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYIMVKGCCVGPKKRVVTFRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>gb|EOY16774.1| Ribosomal protein 1 [Theobroma cacao]
          Length = 389

 Score =  125 bits (314), Expect = 6e-27
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKG CVGPKKRVVTLRQSL+ QTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYLMIKGCCVGPKKRVVTLRQSLINQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>ref|XP_003592085.1| L3 Ribosomal protein [Medicago truncatula]
           gi|355481133|gb|AES62336.1| L3 Ribosomal protein
           [Medicago truncatula]
          Length = 337

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           D+LMIKGGCVGPKKRV+TLRQSLLKQTSR+ALE+I LKFIDTSSKFGHGRFQTT EKQKF
Sbjct: 272 DFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTSEKQKF 331

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 332 YGRLKA 337


>ref|XP_003592084.1| L3 Ribosomal protein [Medicago truncatula]
           gi|355481132|gb|AES62335.1| L3 Ribosomal protein
           [Medicago truncatula]
          Length = 455

 Score =  125 bits (314), Expect = 6e-27
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           D+LMIKGGCVGPKKRV+TLRQSLLKQTSR+ALE+I LKFIDTSSKFGHGRFQTT EKQKF
Sbjct: 390 DFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTSEKQKF 449

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 450 YGRLKA 455


>gb|EMS50040.1| 60S ribosomal protein L3 [Triticum urartu]
          Length = 389

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKG CVGPKKRVVTLRQSLLKQTSR+ALEEI LKFIDTSSKFGHGRFQTT EKQKF
Sbjct: 324 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>ref|NP_001275276.1| 60S ribosomal protein L3-like [Solanum tuberosum]
           gi|82623411|gb|ABB87120.1| ribosomal protein L3-like
           [Solanum tuberosum]
          Length = 389

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYL+IKG CVGPKKRVVTLRQSLL QTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYLLIKGCCVGPKKRVVTLRQSLLNQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>ref|XP_003534345.1| PREDICTED: 60S ribosomal protein L3 [Glycine max]
          Length = 389

 Score =  125 bits (313), Expect = 8e-27
 Identities = 60/66 (90%), Positives = 64/66 (96%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DY+M+KG CVGPKKRV+TLR+SLLKQTSRVALEEI LKFIDTSSKFGHGRFQTTQEKQKF
Sbjct: 324 DYIMVKGCCVGPKKRVITLRRSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


>gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum]
           gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3
           [Triticum aestivum] gi|146141400|tpg|DAA01148.1|
           TPA_inf: ribosomal protein L3A-3 [Triticum aestivum]
          Length = 389

 Score =  125 bits (313), Expect = 8e-27
 Identities = 62/66 (93%), Positives = 63/66 (95%)
 Frame = -3

Query: 231 DYLMIKGGCVGPKKRVVTLRQSLLKQTSRVALEEINLKFIDTSSKFGHGRFQTTQEKQKF 52
           DYLMIKG CVGPKKRVVTLRQSLLKQTSR+ALEEI LKFIDTSSKFGHGRFQTT EKQKF
Sbjct: 324 DYLMIKGCCVGPKKRVVTLRQSLLKQTSRLALEEIKLKFIDTSSKFGHGRFQTTDEKQKF 383

Query: 51  YGRLKA 34
           YGRLKA
Sbjct: 384 YGRLKA 389


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