BLASTX nr result

ID: Rheum21_contig00009538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00009538
         (1705 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455711.1| hypothetical protein SORBIDRAFT_03g022135 [S...    61   1e-06
ref|XP_002455322.1| hypothetical protein SORBIDRAFT_03g008395 [S...    60   3e-06

>ref|XP_002455711.1| hypothetical protein SORBIDRAFT_03g022135 [Sorghum bicolor]
            gi|241927686|gb|EES00831.1| hypothetical protein
            SORBIDRAFT_03g022135 [Sorghum bicolor]
          Length = 874

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
 Frame = +2

Query: 1175 IREMRFESMLHLNIKGVPHCLAFWILENYDEIKCEIKMVDGSTIKVTEEEVHRVLQIPRG 1354
            I ++ F S+L L    VP+ L  W+LE +D  K  + + +G +    ++ VH++L IP G
Sbjct: 26   IEKIGFSSLLGLQCLEVPNDLYHWLLEYFDPTKSTLILPNGFSYTFNDKCVHKILGIPIG 85

Query: 1355 QRKVERRGKEAANNAIIQEWKEYFDNIKQIRPS--HVAAKLKECTSKVWFERLFIVLFMS 1528
             R+V+ +G   +       +K   ++I Q  PS   +   +K       F R+F++L +S
Sbjct: 86   PRRVDGKGTVES----CYFFKNQINSI-QHTPSVEELCTLIKPDLHGDEFVRIFMLLALS 140

Query: 1529 VLVESNQKG--TIPQHMMISDDEDIKGYNWCELVMSVLPQTTNEWKRKKER 1675
              +  N +   +   +  + D + I  +NWC  V+      T+++K++K R
Sbjct: 141  AFLCPNTRSVCSTRYYAELVDVKSISEFNWCSFVLEWFLSYTSKYKKRKLR 191


>ref|XP_002455322.1| hypothetical protein SORBIDRAFT_03g008395 [Sorghum bicolor]
            gi|241927297|gb|EES00442.1| hypothetical protein
            SORBIDRAFT_03g008395 [Sorghum bicolor]
          Length = 873

 Score = 60.1 bits (144), Expect = 3e-06
 Identities = 45/171 (26%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
 Frame = +2

Query: 1175 IREMRFESMLHLNIKGVPHCLAFWILENYDEIKCEIKMVDGSTIKVTEEEVHRVLQIPRG 1354
            I ++ F S+L L    VP+ L  W+LE +D  K  + + +G +    ++ VH++L IP G
Sbjct: 26   IEKIGFSSLLGLQCLEVPNDLYHWLLEYFDPTKSTLILPNGFSYTFNDKCVHKILGIPIG 85

Query: 1355 QRKVERRGKEAANNAIIQEWKEYFDNIKQIRPS--HVAAKLKECTSKVWFERLFIVLFMS 1528
             R+V+ +G   +       +K   ++I Q  PS   +   +K       F R+F++L +S
Sbjct: 86   PRRVDGKGTVES----CYFFKNQINSI-QHTPSVEELCTLIKPDLHGDEFVRIFMLLALS 140

Query: 1529 VLVESNQK--GTIPQHMMISDDEDIKGYNWCELVMSVLPQTTNEWKRKKER 1675
              +  N +   +   +  + D + I  +NWC  V+      T+++K++K R
Sbjct: 141  AFLCPNTRFVCSTRYYAELVDVKSISEFNWCSFVLEWFLSYTSKYKKRKLR 191


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