BLASTX nr result
ID: Rheum21_contig00009423
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009423
(268 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23692.3| unnamed protein product [Vitis vinifera] 75 7e-12
ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein S... 75 7e-12
emb|CAN59901.1| hypothetical protein VITISV_002889 [Vitis vinifera] 75 7e-12
ref|XP_006828734.1| hypothetical protein AMTR_s00001p00047670 [A... 75 1e-11
ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [R... 75 1e-11
ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin... 74 2e-11
gb|ABR17910.1| unknown [Picea sitchensis] 74 2e-11
gb|ABK21888.1| unknown [Picea sitchensis] 74 2e-11
ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein S... 74 2e-11
ref|XP_006435354.1| hypothetical protein CICLE_v10002830mg [Citr... 74 2e-11
ref|XP_006416382.1| hypothetical protein EUTSA_v10009078mg [Eutr... 74 2e-11
gb|EPS68646.1| hypothetical protein M569_06124 [Genlisea aurea] 74 2e-11
gb|EOY15253.1| Small nuclear ribonucleoprotein family protein [T... 74 2e-11
ref|XP_006303189.1| hypothetical protein CARUB_v10010633mg [Caps... 74 2e-11
gb|EMJ25100.1| hypothetical protein PRUPE_ppa013274mg [Prunus pe... 74 2e-11
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S... 74 2e-11
ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein S... 74 2e-11
gb|AAF79623.1|AC027665_24 F5M15.9 [Arabidopsis thaliana] 74 2e-11
ref|NP_564119.1| small nuclear ribonucleoprotein-like protein [A... 74 2e-11
ref|XP_002890392.1| hypothetical protein ARALYDRAFT_335306 [Arab... 74 2e-11
>emb|CBI23692.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVVTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIEC 37
>ref|XP_002282385.1| PREDICTED: small nuclear ribonucleoprotein Sm D3 [Vitis vinifera]
gi|297744494|emb|CBI37756.3| unnamed protein product
[Vitis vinifera]
Length = 132
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVVTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIEC 37
>emb|CAN59901.1| hypothetical protein VITISV_002889 [Vitis vinifera]
Length = 116
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/37 (97%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVVTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIEC 37
>ref|XP_006828734.1| hypothetical protein AMTR_s00001p00047670 [Amborella trichopoda]
gi|548833713|gb|ERM96150.1| hypothetical protein
AMTR_s00001p00047670 [Amborella trichopoda]
Length = 133
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGH+VTVELKSGELYRGSM+EC
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMVEC 37
>ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
gi|223551374|gb|EEF52860.1| small nuclear
ribonucleoprotein, putative [Ricinus communis]
Length = 131
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGH+VTVELKSGELYRGSM+EC
Sbjct: 1 MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMVEC 37
>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
gi|356525557|ref|XP_003531391.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Glycine max]
gi|255626793|gb|ACU13741.1| unknown [Glycine max]
gi|561033199|gb|ESW31778.1| hypothetical protein
PHAVU_002G266900g [Phaseolus vulgaris]
Length = 131
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GHVVTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIEC 37
>gb|ABR17910.1| unknown [Picea sitchensis]
Length = 133
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVVTVELKSGELYRG+MIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIEC 37
>gb|ABK21888.1| unknown [Picea sitchensis]
Length = 133
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVVTVELKSGELYRG+MIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIEC 37
>ref|XP_002270532.2| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Vitis
vinifera] gi|297745546|emb|CBI40711.3| unnamed protein
product [Vitis vinifera]
Length = 132
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVVTVELKSGELYRG+MIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGNMIEC 37
>ref|XP_006435354.1| hypothetical protein CICLE_v10002830mg [Citrus clementina]
gi|568839629|ref|XP_006473783.1| PREDICTED: small
nuclear ribonucleoprotein Sm D3-like [Citrus sinensis]
gi|557537476|gb|ESR48594.1| hypothetical protein
CICLE_v10002830mg [Citrus clementina]
Length = 132
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GHVVTVELKSGELYRGSM+EC
Sbjct: 1 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVEC 37
>ref|XP_006416382.1| hypothetical protein EUTSA_v10009078mg [Eutrema salsugineum]
gi|557094153|gb|ESQ34735.1| hypothetical protein
EUTSA_v10009078mg [Eutrema salsugineum]
Length = 135
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GH+VTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIEC 37
>gb|EPS68646.1| hypothetical protein M569_06124 [Genlisea aurea]
Length = 133
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GHVVTVELKSGELYRGSM+EC
Sbjct: 1 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVEC 37
>gb|EOY15253.1| Small nuclear ribonucleoprotein family protein [Theobroma cacao]
Length = 132
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GHVVTVELKSGELYRGSM+EC
Sbjct: 1 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVEC 37
>ref|XP_006303189.1| hypothetical protein CARUB_v10010633mg [Capsella rubella]
gi|482571900|gb|EOA36087.1| hypothetical protein
CARUB_v10010633mg [Capsella rubella]
Length = 129
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GH+VTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIEC 37
>gb|EMJ25100.1| hypothetical protein PRUPE_ppa013274mg [Prunus persica]
Length = 131
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GHVVTVELKSGELYRGSM+EC
Sbjct: 1 MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMVEC 37
>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVV+VELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIEC 37
>ref|XP_004145538.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
sativus]
Length = 132
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEAAGHVV+VELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIEC 37
>gb|AAF79623.1|AC027665_24 F5M15.9 [Arabidopsis thaliana]
Length = 207
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GH+VTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIEC 37
>ref|NP_564119.1| small nuclear ribonucleoprotein-like protein [Arabidopsis thaliana]
gi|8886923|gb|AAF80609.1|AC069251_2 F2D10.7 [Arabidopsis
thaliana] gi|15724292|gb|AAL06539.1|AF412086_1
At1g20580/F2D10_6 [Arabidopsis thaliana]
gi|20334748|gb|AAM16235.1| At1g20580/F2D10_6
[Arabidopsis thaliana] gi|332191869|gb|AEE29990.1| small
nuclear ribonucleoprotein-like protein [Arabidopsis
thaliana]
Length = 131
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GH+VTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIEC 37
>ref|XP_002890392.1| hypothetical protein ARALYDRAFT_335306 [Arabidopsis lyrata subsp.
lyrata] gi|297336234|gb|EFH66651.1| hypothetical protein
ARALYDRAFT_335306 [Arabidopsis lyrata subsp. lyrata]
Length = 142
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +3
Query: 156 MSRSLGIPVKLMHEAAGHVVTVELKSGELYRGSMIEC 266
MSRSLGIPVKL+HEA+GH+VTVELKSGELYRGSMIEC
Sbjct: 1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIEC 37