BLASTX nr result
ID: Rheum21_contig00009403
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009403
(2234 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI39676.3| unnamed protein product [Vitis vinifera] 273 2e-70
ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citr... 234 2e-58
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera] 232 6e-58
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V... 229 3e-57
gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus pe... 220 2e-54
ref|XP_006382253.1| Phytochrome-interacting factor 3 family prot... 214 2e-52
ref|XP_002330047.1| predicted protein [Populus trichocarpa] 214 2e-52
gb|EOY11781.1| Phytochrome interacting factor 3, putative isofor... 212 5e-52
gb|EOY11780.1| Phytochrome interacting factor 3, putative isofor... 212 5e-52
gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsa... 209 4e-51
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm... 209 5e-51
gb|EOY11783.1| Phytochrome interacting factor 3, putative isofor... 207 1e-50
gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsa... 207 1e-50
gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsa... 207 1e-50
gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsa... 207 1e-50
ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Popu... 207 2e-50
gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsa... 207 2e-50
gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis] 205 8e-50
ref|XP_006604778.1| PREDICTED: transcription factor PIF3-like is... 205 8e-50
ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatu... 203 2e-49
>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 273 bits (699), Expect = 2e-70
Identities = 191/438 (43%), Positives = 237/438 (54%), Gaps = 56/438 (12%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPTNLPS-DISIQGDIGCCELVYENGQVTMRNQAIRERKGXXXXXX 570
MPFSEL R AKG+ + + D+S + ELV+E GQ+ M+ Q+ R RK
Sbjct: 1 MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSP----- 55
Query: 571 XXXXXXXXXXXXIDSVLNDFPLSAP-PCDMSL---------DEDDNTVPWLNCPAVEPFN 720
+ N FP P P D ++DD+ VPWLN P E
Sbjct: 56 ---------------LSNSFPSHTPKPRDKDTGHGTNSKMGNQDDDMVPWLNYPIDESLQ 100
Query: 721 NVYCSDILPESFGVSGSEFA-HSN------------------------------STAAKA 807
+ YCSD L E GV+ +E + H N A+KA
Sbjct: 101 HDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSNTISAHNGVSLEQGNASKA 160
Query: 808 ---------PRSANSDLACSEFKNST---SIKLQKNNSGQPNNNASGIMNFSYFSRFAAN 951
PRS+ S+ +++ S K QK + GQ NN SG+MNFS+FSR AA
Sbjct: 161 SAAGVEPSRPRSSQLYPPSSQQSSTSGFSSTKTQKQDPGQTRNN-SGLMNFSHFSRPAAL 219
Query: 952 CKQTAGNEKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPEQSVARCREKAVEPAVATSSV 1131
K N G+ S S Q + IP EK +EPAVA SSV
Sbjct: 220 VKANLQNIVICQEGACKNEKS---SNQVLGARTAKGIPDG-------EKTIEPAVACSSV 269
Query: 1132 CSGNSLERDSSNPLSSLKRKCFETGDSEGPSEEAEDESVGVQKTAPSR--SGSKRSRAAE 1305
CSGNS+ER S++P +LKRKC +T +SE PSE+ E+ESVGV+K+AP++ +GSKRSRAAE
Sbjct: 270 CSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTGSKRSRAAE 329
Query: 1306 VHNQSXXXXXXXINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQILSMGTGMY 1485
VHN S INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI+SMGTG+
Sbjct: 330 VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLC 389
Query: 1486 MSQMMLPAALQHMHRAHM 1539
M MMLP +QH+H AHM
Sbjct: 390 MPPMMLPTGMQHIHAAHM 407
>ref|XP_006423961.1| hypothetical protein CICLE_v10027890mg [Citrus clementina]
gi|567862616|ref|XP_006423962.1| hypothetical protein
CICLE_v10027890mg [Citrus clementina]
gi|568853382|ref|XP_006480339.1| PREDICTED: transcription
factor PIF3-like [Citrus sinensis]
gi|557525895|gb|ESR37201.1| hypothetical protein
CICLE_v10027890mg [Citrus clementina]
gi|557525896|gb|ESR37202.1| hypothetical protein
CICLE_v10027890mg [Citrus clementina]
Length = 735
Score = 234 bits (596), Expect = 2e-58
Identities = 209/645 (32%), Positives = 267/645 (41%), Gaps = 181/645 (28%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPT-----NLPSDISIQGDIGCCELVYENGQVTMRNQAIRERKGXX 558
MP EL + K ++D + +D+S + + ELV+ENGQ+ + Q+ R +K
Sbjct: 1 MPLFELYQMTKEKLDSAKQKNPSSSTDLSFEPENDLVELVWENGQILKQGQSSRTKKSPT 60
Query: 559 XXXXXXXXXXXXXXXX-------------IDSVLNDFPLSAPPCDMSLDEDDNTVPWLNC 699
+D++LN +S P +M L++DD+ VPWLN
Sbjct: 61 SNSLPSYCLRSHTPKNRDKDLGKTGKFGTVDAMLNGIQMSDPSGEMGLNQDDDMVPWLNY 120
Query: 700 PAVEPFNNVYCSDILPES---------------------------------FGVSGSEFA 780
E YCSD L E FG G+
Sbjct: 121 AVDESLQQDYCSDFLHELSGVTGNELSSQNNFASFDKRSSSNQFDREFNSVFGNHGARLE 180
Query: 781 HSNSTA--------AKAPRSAN----------------------SDLACSEFKNSTS--- 861
H N + A PRS+ SD + KNST
Sbjct: 181 HGNVSKVSSVGGGEATRPRSSTNSVYTSSSQQCQTSLPNLRSGVSDSTSNGIKNSTDNGI 240
Query: 862 --------------IKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------- 972
+KL K + NN SG+MNFS+F+R A + N
Sbjct: 241 FQGSNPTATGNLSGLKLHKQDQRLSANN-SGVMNFSHFARPVALVRANLQNIGSMPGARL 299
Query: 973 EKNNHMGS-------------------------------AFVNSSVGFSQQESAPPKSD- 1056
+ MGS A V S V QE+ +
Sbjct: 300 SRIERMGSKDKSSVASRSPVESPLIDSSGCLRKESSCQPAAVTSKVDVKPQEAKSSEQPV 359
Query: 1057 SIPPEQSVARCRE-------------------------KAVEPAVATSSVCSGNSLERDS 1161
S PPE A CRE K VEP VA SSVCSGNS+ER S
Sbjct: 360 SEPPE---AACREDALNNDKKPSQVHAESATKGVVESEKTVEPVVAASSVCSGNSVERAS 416
Query: 1162 SNPLSSLKRKCFETGDSEGPSEE--AEDESVGVQKTAPSR--SGSKRSRAAEVHNQSXXX 1329
+ ++KRK + DSE PSEE E+ESVGV+K P R +GSKRSRAAEVHN S
Sbjct: 417 DDLPHNVKRKHCDLDDSECPSEEQDVEEESVGVKKQVPGRVGTGSKRSRAAEVHNLSERR 476
Query: 1330 XXXXINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPA 1509
INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI+SMG G YM MM P+
Sbjct: 477 RRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGFYMPPMMYPS 536
Query: 1510 ALQHMHRAHMPQXXXXXXXXXXXXXXXXXXQPDVNS------MMQMPCIQPPYFPXXXXX 1671
+QHMH AHM PD+N M+Q+P + +FP
Sbjct: 537 GMQHMHAAHMAH-FPPMGIGMGMGIGYGMGMPDINGGSSCYPMVQVPAMHGAHFPGTSV- 594
Query: 1672 XXXXXXXHQTPANLGQGLSASMGNVSGMP-------LPNTSMNQL 1785
P+ L QG++ S + G+P +P+ +N L
Sbjct: 595 --------SGPSAL-QGMAGSNFQLLGLPAQGHHMSMPHAPLNPL 630
>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 232 bits (591), Expect = 6e-58
Identities = 148/330 (44%), Positives = 182/330 (55%), Gaps = 54/330 (16%)
Frame = +1
Query: 712 PFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQ 891
P ++ C + P +++ S A S NS + +S K QK + GQ
Sbjct: 200 PPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQ 259
Query: 892 PNNNASGIMNFSYFSRFAANCKQTAGN------------------------EKNNHMGSA 999
NN SG+MNFS+FSR AA K N N S
Sbjct: 260 TRNN-SGLMNFSHFSRPAALVKANLQNIGAIAGPSSSSKDRIGSKDKQPAASSRNPAESR 318
Query: 1000 FVNSSVGFSQQES------------------APPKSDSIPPEQSVARCR----------E 1095
V+SS G + A + +P EQS E
Sbjct: 319 HVDSSCGLQKDVDSHSEPVMVPASVDLKPVVAKTMEEPLPAEQSPVHLPRRTAKGIPDGE 378
Query: 1096 KAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGPSEEAEDESVGVQKTAPSR 1275
K++EPAVA SSVCSGNS+ER S++P +LKRKC +T +SE PSE+ E+ESVGV+K+AP++
Sbjct: 379 KSIEPAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAK 438
Query: 1276 --SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 1449
+GSKRSRAAEVHN S INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL
Sbjct: 439 GGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 498
Query: 1450 QVQILSMGTGMYMSQMMLPAALQHMHRAHM 1539
QVQI+SMGTG+ M MMLP +QH+H AHM
Sbjct: 499 QVQIMSMGTGLCMPPMMLPTGMQHIHAAHM 528
Score = 89.7 bits (221), Expect = 5e-15
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPTNLPS-DISIQGDIGCCELVYENGQVTMRNQAIRERKGXXXXXX 570
MPFSEL R AKG+ + + D+S + ELV+E GQ+ M+ Q+ R RK
Sbjct: 1 MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPLSNSF 60
Query: 571 XXXXXXXXXXXX-------------IDSVLNDFPLSAPPCDMSLDEDDNTVPWLNCPAVE 711
+D +LNDFPLS P +M L +DD+ VPWLN P E
Sbjct: 61 PSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPIDE 120
Query: 712 PFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQ 891
+ YCSD L E GV+ +E S + + A E +NS + ++ +N+
Sbjct: 121 SLQHDYCSDFLQELSGVTVNEL------------STHCNFASGEKRNSNNQTIKDSNTIS 168
Query: 892 PNNNAS 909
+N S
Sbjct: 169 AHNGVS 174
>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 229 bits (585), Expect = 3e-57
Identities = 149/345 (43%), Positives = 183/345 (53%), Gaps = 69/345 (20%)
Frame = +1
Query: 712 PFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQ 891
P ++ C + P +++ S A S NS + +S K QK + GQ
Sbjct: 200 PPSSQQCQTLFPSMRSKVSDPISNNTSNAMHHTVSGNSIRLPASTSGFSSTKTQKQDPGQ 259
Query: 892 PNNNASGIMNFSYFSRFAANCKQTAGN------------------------EKNNHMGSA 999
NN SG+MNFS+FSR AA K N N S
Sbjct: 260 TRNN-SGLMNFSHFSRPAALVKANLQNIGAIAGPSSSSKDRIGSKDKQPAASSRNPAESR 318
Query: 1000 FVNSSVGFSQQES------------------APPKSDSIPPEQSVARCRE---------- 1095
V+SS G + A + +P EQS C+E
Sbjct: 319 HVDSSCGLQKDVDSHSEPVMVPASVDLKPVVAKTMEEPLPAEQSPVICQEGACKNEKSSN 378
Query: 1096 ---------------KAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGPSEE 1230
K +EPAVA SSVCSGNS+ER S++P +LKRKC +T +SE PSE+
Sbjct: 379 QVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSED 438
Query: 1231 AEDESVGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKVDKA 1404
E+ESVGV+K+AP++ +GSKRSRAAEVHN S INEKMRALQELIPNCNKVDKA
Sbjct: 439 VEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKA 498
Query: 1405 SMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHM 1539
SMLDEAIEYLKTLQLQVQI+SMGTG+ M MMLP +QH+H AHM
Sbjct: 499 SMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHM 543
Score = 89.7 bits (221), Expect = 5e-15
Identities = 60/186 (32%), Positives = 86/186 (46%), Gaps = 14/186 (7%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPTNLPS-DISIQGDIGCCELVYENGQVTMRNQAIRERKGXXXXXX 570
MPFSEL R AKG+ + + D+S + ELV+E GQ+ M+ Q+ R RK
Sbjct: 1 MPFSELYRMAKGKPESVQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSPLSNSF 60
Query: 571 XXXXXXXXXXXX-------------IDSVLNDFPLSAPPCDMSLDEDDNTVPWLNCPAVE 711
+D +LNDFPLS P +M L +DD+ VPWLN P E
Sbjct: 61 PSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLSVPSAEMGLSQDDDMVPWLNYPIDE 120
Query: 712 PFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQ 891
+ YCSD L E GV+ +E S + + A E +NS + ++ +N+
Sbjct: 121 SLQHDYCSDFLQELSGVTVNEL------------STHCNFASGEKRNSNNQTIKDSNTIS 168
Query: 892 PNNNAS 909
+N S
Sbjct: 169 AHNGVS 174
>gb|EMJ08410.1| hypothetical protein PRUPE_ppa001899mg [Prunus persica]
Length = 744
Score = 220 bits (561), Expect = 2e-54
Identities = 158/410 (38%), Positives = 203/410 (49%), Gaps = 77/410 (18%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S+D D + P + P ++ + P SF S+ N+ A P +
Sbjct: 179 SIDGADVSRPRTGTSQLYPLSSQQSQSLFP-SFRSRVSDIVGDNTGNATHPTVCKNSTQV 237
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCK-----------------QTA 966
S IK+Q+ + P+NN S ++NFS+FSR AA K +
Sbjct: 238 SSAGVFPGIKMQRQDPVMPSNNNSSVVNFSHFSRPAALVKSNLQSIGVVAGSGLSSMEKI 297
Query: 967 GNE-------KNNHMGSAFVNSSVGFSQQES------------------APPKSDSIPPE 1071
GN+ NN S ++SS G S++ + A P +S +
Sbjct: 298 GNKGKVSAATSNNPPESTLIDSSSGLSKESNSQCQHITVTSNVELKPTEAKPLEESCAAK 357
Query: 1072 QSVARCRE-------------------------KAVEPAVATSSVCSGNSLERDSSNPLS 1176
QS A C+E K +EP VA SSVCSGNS+ER S +P
Sbjct: 358 QSEAACQEDASKNDTNTNHIPCESANRVLRDGEKTLEPVVA-SSVCSGNSVERGSDDPTH 416
Query: 1177 SLKRKCFETGDSEGPSEEAEDESVGVQKTAPSRS-GSKRSRAAEVHNQSXXXXXXXINEK 1353
+LKRK +T +SE S++ E+ESVGV+K A +R GSKRSRAAEVHN S INEK
Sbjct: 417 ALKRKSRDTDESECHSDDVEEESVGVKKIAHARGMGSKRSRAAEVHNLSERRRRDRINEK 476
Query: 1354 MRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMH-- 1527
MRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI+SMG G+YM MM PA +QHMH
Sbjct: 477 MRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMFPAGMQHMHAP 536
Query: 1528 -RAHMPQXXXXXXXXXXXXXXXXXXQPDVNS------MMQMPCIQPPYFP 1656
AH PD+N M+Q+P +Q +FP
Sbjct: 537 RMAHFSPMGLGMGMGMGLGMGFGMGMPDMNGGSSSFPMLQVPPMQGAHFP 586
Score = 78.6 bits (192), Expect = 1e-11
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPTNLPSDISIQGDIGCCELVYENGQVTMRNQAIRERKGXXXXXXX 573
MP SE R A G VD + D D ELV+ENGQ+ M+ Q+ R RK
Sbjct: 1 MPLSEFYRMA-GRVDSSQ---DFEPVNDF--VELVWENGQIMMQGQSSRTRKSPTCNNSL 54
Query: 574 XXXXXXXXXXXI--------------DSVLNDFPLSAPPCDMSLDEDDNTVPWLNCPAVE 711
+ +SVL++ PLS P +M L EDD +PWLN E
Sbjct: 55 PSYTPKNRDKDVGNGNIAKTGKFGSVESVLDEIPLSVPSSEMGLSEDDEMLPWLNYSIDE 114
Query: 712 PFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNS 855
P ++ YC + LPE V+ +E + +++ A+ RS++S + NS
Sbjct: 115 PLHHEYCDEFLPELSTVTANEISSNSNLASMDKRSSSSQVYRDSNTNS 162
>ref|XP_006382253.1| Phytochrome-interacting factor 3 family protein [Populus trichocarpa]
gi|550337605|gb|ERP60050.1| Phytochrome-interacting
factor 3 family protein [Populus trichocarpa]
Length = 742
Score = 214 bits (544), Expect = 2e-52
Identities = 156/387 (40%), Positives = 195/387 (50%), Gaps = 78/387 (20%)
Frame = +1
Query: 727 YCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQPNNNA 906
+C P ++ S S AA S +S A + SIK+QK Q N+
Sbjct: 209 HCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSIRAPTSGGGFPSIKMQKQVPAQSTTNS 268
Query: 907 SGIMNFSYFSRFAA------------------NCKQTAGNEKNNHMGSAF------VNSS 1014
S +MNFS+F+R AA N ++T +K + S+ +NS
Sbjct: 269 S-LMNFSHFARPAALAKANLQNIGMRAGTGISNMERTQNKDKGSIASSSNPAECTPINSC 327
Query: 1015 VGFSQQESA-------PPKSDSIPPE----------------------QSVARCR----- 1092
G ++ S+ PPK D+ P E +S CR
Sbjct: 328 SGLLKETSSHCLPVLMPPKVDAKPSEAKPAEGFVPAELPEATIPEGDSKSDRNCRQNFCE 387
Query: 1093 ---------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGPSEEAEDES 1245
EK EP VA+SSV S NS+ER S +P +LKRK +T +SEGPSE+ E+ES
Sbjct: 388 SAIKGVADVEKTKEPVVASSSVGSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEES 447
Query: 1246 VGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKVDKASMLDE 1419
VG +K AP+R +GSKR+RAAEVHN S INEKMRALQELIPNCNKVDKASMLDE
Sbjct: 448 VGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 507
Query: 1420 AIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQ---XXXXXXXXXXXXXXX 1590
AIEYLKTLQLQVQI+SMG G+YM MMLP + HMH AHM Q
Sbjct: 508 AIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPHMHAAHMGQFLPMGVGMGMRMGMGMGF 567
Query: 1591 XXXQPDVNS------MMQMPCIQPPYF 1653
PDVN M Q+P + P+F
Sbjct: 568 GMSMPDVNGGSSGCPMYQVPPMHGPHF 594
>ref|XP_002330047.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 214 bits (544), Expect = 2e-52
Identities = 156/387 (40%), Positives = 195/387 (50%), Gaps = 78/387 (20%)
Frame = +1
Query: 727 YCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQPNNNA 906
+C P ++ S S AA S +S A + SIK+QK Q N+
Sbjct: 200 HCQTSFPYFRSRVSAKNGDSTSNAAHHVVSVDSIRAPTSGGGFPSIKMQKQVPAQSTTNS 259
Query: 907 SGIMNFSYFSRFAA------------------NCKQTAGNEKNNHMGSAF------VNSS 1014
S +MNFS+F+R AA N ++T +K + S+ +NS
Sbjct: 260 S-LMNFSHFARPAALAKANLQNIGMRAGTGISNMERTQNKDKGSIASSSNPAECTPINSC 318
Query: 1015 VGFSQQESA-------PPKSDSIPPE----------------------QSVARCR----- 1092
G ++ S+ PPK D+ P E +S CR
Sbjct: 319 SGLLKETSSHCLPVLMPPKVDAKPSEAKPAEGFVPAELPEATIPEGDSKSDRNCRQNFCE 378
Query: 1093 ---------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGPSEEAEDES 1245
EK EP VA+SSV S NS+ER S +P +LKRK +T +SEGPSE+ E+ES
Sbjct: 379 SAIKGVADVEKTKEPVVASSSVGSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEES 438
Query: 1246 VGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKVDKASMLDE 1419
VG +K AP+R +GSKR+RAAEVHN S INEKMRALQELIPNCNKVDKASMLDE
Sbjct: 439 VGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDE 498
Query: 1420 AIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQ---XXXXXXXXXXXXXXX 1590
AIEYLKTLQLQVQI+SMG G+YM MMLP + HMH AHM Q
Sbjct: 499 AIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPHMHAAHMGQFLPMGVGMGMRMGMGMGF 558
Query: 1591 XXXQPDVNS------MMQMPCIQPPYF 1653
PDVN M Q+P + P+F
Sbjct: 559 GMSMPDVNGGSSGCPMYQVPPMHGPHF 585
>gb|EOY11781.1| Phytochrome interacting factor 3, putative isoform 2 [Theobroma
cacao]
Length = 731
Score = 212 bits (540), Expect = 5e-52
Identities = 139/290 (47%), Positives = 165/290 (56%), Gaps = 64/290 (22%)
Frame = +1
Query: 862 IKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGNEK---------NNHMGSA----- 999
IK+QK + P NN +MNFS+FSR AA K + N + GSA
Sbjct: 259 IKMQKQDQVAPCNNTV-LMNFSHFSRPAALVKASLQNISAIASIERIGSKEKGSAASISD 317
Query: 1000 -----FVNSSVG-----FSQ-------------QESAPPKSDSIPPEQSVARCRE----- 1095
F++SS+ FSQ + A + + E A C E
Sbjct: 318 PADTTFIDSSIDLQKEKFSQCQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKN 377
Query: 1096 --------------------KAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSE 1215
K VEP +A SSVCSGNS+ER S +P+ +LKRK + +SE
Sbjct: 378 VKNPSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPVYNLKRKSRDNEESE 437
Query: 1216 GPSEEAEDESVGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCN 1389
PSE+AE+ESVGV+K P+R SGSKRSRAAEVHN S INEKMRALQELIPNCN
Sbjct: 438 CPSEDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCN 497
Query: 1390 KVDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHM 1539
KVDKASMLDEAIEYLKTLQLQVQI+SMG G+YM MMLP +QHMH AHM
Sbjct: 498 KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHM 547
Score = 80.1 bits (196), Expect = 4e-12
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPT-----NLPSDISIQGDIGCCELVYENGQVTMRNQAIRERK--- 549
MP SEL R A+G++D + + +D+S + ELV ENGQ+ M+ Q+ + R+
Sbjct: 1 MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60
Query: 550 ----------------GXXXXXXXXXXXXXXXXXXIDSVLNDFPLSAPPCDMSLDEDDNT 681
IDSVL++ P+S P +MSL++DD
Sbjct: 61 CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDEV 120
Query: 682 VPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTS 861
VPWLN P + + Y SD LPE GV+ +E + ++ A+ RS + +C+ N+ +
Sbjct: 121 VPWLNYPVDQSLQSEY-SDFLPELSGVAVNETSTHSNFASFDRRSQSIRDSCTVSLNNGA 179
Query: 862 IKLQKNNSGQP 894
+ Q N S P
Sbjct: 180 VFEQGNPSKVP 190
>gb|EOY11780.1| Phytochrome interacting factor 3, putative isoform 1 [Theobroma
cacao]
Length = 729
Score = 212 bits (540), Expect = 5e-52
Identities = 139/290 (47%), Positives = 165/290 (56%), Gaps = 64/290 (22%)
Frame = +1
Query: 862 IKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGNEK---------NNHMGSA----- 999
IK+QK + P NN +MNFS+FSR AA K + N + GSA
Sbjct: 259 IKMQKQDQVAPCNNTV-LMNFSHFSRPAALVKASLQNISAIASIERIGSKEKGSAASISD 317
Query: 1000 -----FVNSSVG-----FSQ-------------QESAPPKSDSIPPEQSVARCRE----- 1095
F++SS+ FSQ + A + + E A C E
Sbjct: 318 PADTTFIDSSIDLQKEKFSQCQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKN 377
Query: 1096 --------------------KAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSE 1215
K VEP +A SSVCSGNS+ER S +P+ +LKRK + +SE
Sbjct: 378 VKNPSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPVYNLKRKSRDNEESE 437
Query: 1216 GPSEEAEDESVGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCN 1389
PSE+AE+ESVGV+K P+R SGSKRSRAAEVHN S INEKMRALQELIPNCN
Sbjct: 438 CPSEDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCN 497
Query: 1390 KVDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHM 1539
KVDKASMLDEAIEYLKTLQLQVQI+SMG G+YM MMLP +QHMH AHM
Sbjct: 498 KVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHM 547
Score = 80.1 bits (196), Expect = 4e-12
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPT-----NLPSDISIQGDIGCCELVYENGQVTMRNQAIRERK--- 549
MP SEL R A+G++D + + +D+S + ELV ENGQ+ M+ Q+ + R+
Sbjct: 1 MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60
Query: 550 ----------------GXXXXXXXXXXXXXXXXXXIDSVLNDFPLSAPPCDMSLDEDDNT 681
IDSVL++ P+S P +MSL++DD
Sbjct: 61 CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDEV 120
Query: 682 VPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTS 861
VPWLN P + + Y SD LPE GV+ +E + ++ A+ RS + +C+ N+ +
Sbjct: 121 VPWLNYPVDQSLQSEY-SDFLPELSGVAVNETSTHSNFASFDRRSQSIRDSCTVSLNNGA 179
Query: 862 IKLQKNNSGQP 894
+ Q N S P
Sbjct: 180 VFEQGNPSKVP 190
>gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting
factor 3.1 [Populus balsamifera]
Length = 589
Score = 209 bits (532), Expect = 4e-51
Identities = 166/446 (37%), Positives = 207/446 (46%), Gaps = 68/446 (15%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S + D P + + P ++ C P ++ S S A + +S A
Sbjct: 57 SAGDIDAKRPGTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAP 116
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------------- 972
+ SIK+QK P+ S +MNFS+F+R AA K N
Sbjct: 117 TSGGGFPSIKMQKQVPA-PSPINSSLMNFSHFARPAALVKANLQNVGMRASSGTSSMERM 175
Query: 973 ------------EKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPE-----------QSVA 1083
E ++H ++S V E P + S+P E +S
Sbjct: 176 QNKDKGSIGLPKETDSHCRPNMMSSKVEVKPTEVKPAEG-SVPAELPEEMSQEGDSKSDR 234
Query: 1084 RCR--------------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGP 1221
C EK EP VA+SSV SGNS ER S +P +LKRK +T +SEGP
Sbjct: 235 NCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGP 294
Query: 1222 SEEAEDESVGVQKTAPSRSG--SKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKV 1395
SE+AE+ESVG +K A +R+G SKR RAAEVHN S INEKMRALQELIPNCNKV
Sbjct: 295 SEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 354
Query: 1396 DKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQXXXXXXXXXX 1575
DKASMLDEAIEYLKTLQLQVQI+SMG GMYM MMLP + HMH AHM Q
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQ---FLPMGVG 411
Query: 1576 XXXXXXXXQPDVNS------MMQMPCIQPPYFPXXXXXXXXXXXXHQTPA-----NLGQG 1722
PD+N M Q+P + +FP P+ GQG
Sbjct: 412 MGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQG 471
Query: 1723 LSASMGNVSGMPL---PNTSMNQLPN 1791
L S MP+ P N+ PN
Sbjct: 472 LPMSFPRAPLMPMSGGPPPKTNREPN 497
>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical
protein [Ricinus communis]
Length = 758
Score = 209 bits (531), Expect = 5e-51
Identities = 109/153 (71%), Positives = 122/153 (79%), Gaps = 2/153 (1%)
Frame = +1
Query: 1093 EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGPSEEAEDESVGVQKTAPS 1272
EK EP VA+SSVCSGNS+ER S P+ +LKRK ET +SEGPSE+ E+ESVG +K AP+
Sbjct: 396 EKTAEPIVASSSVCSGNSMERVSDEPMQNLKRKHRETEESEGPSEDVEEESVGGKKAAPA 455
Query: 1273 R--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ 1446
R +GSKRSRAAEVHN S INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ
Sbjct: 456 RGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQ 515
Query: 1447 LQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQ 1545
LQVQI+SMG G+YM MMLP + HMH AHM Q
Sbjct: 516 LQVQIMSMGAGLYMPSMMLPPGVPHMHVAHMSQ 548
Score = 63.2 bits (152), Expect = 5e-07
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Frame = +1
Query: 394 MPFSELI-RFAKGEVDP------TNLPSDISIQGDIGCCELVYENGQVT----------M 522
MP SELI R +KG+ D T +D+S + ELV+ENGQ+ +
Sbjct: 1 MPLSELICRLSKGKFDSSSQEKNTTCSTDLSAGPENDFLELVWENGQIQSSRARKISNGV 60
Query: 523 RNQAIRER-KGXXXXXXXXXXXXXXXXXXIDSVLNDFPLSAPPCDMSLDEDDNTVPWLNC 699
++Q + R K +D L++ P+S P +M L+++D+ VPWLN
Sbjct: 61 QSQTSKFRDKDISIGIGNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLNQEDDMVPWLND 120
Query: 700 PAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSD 828
P + YC + L E GV+ +E H+ ++ A + + N +
Sbjct: 121 PIDDSLQQDYCHEFLAELSGVTVNE--HAQNSFASSDKKCNGN 161
>gb|EOY11783.1| Phytochrome interacting factor 3, putative isoform 4 [Theobroma
cacao]
Length = 730
Score = 207 bits (528), Expect = 1e-50
Identities = 139/291 (47%), Positives = 165/291 (56%), Gaps = 65/291 (22%)
Frame = +1
Query: 862 IKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGNEK---------NNHMGSA----- 999
IK+QK + P NN +MNFS+FSR AA K + N + GSA
Sbjct: 259 IKMQKQDQVAPCNNTV-LMNFSHFSRPAALVKASLQNISAIASIERIGSKEKGSAASISD 317
Query: 1000 -----FVNSSVG-----FSQ-------------QESAPPKSDSIPPEQSVARCRE----- 1095
F++SS+ FSQ + A + + E A C E
Sbjct: 318 PADTTFIDSSIDLQKEKFSQCQPTIVLMKTDRKESKAKSLDEPVTAEPIDAICEENTPKN 377
Query: 1096 --------------------KAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSE 1215
K VEP +A SSVCSGNS+ER S +P+ +LKRK + +SE
Sbjct: 378 VKNPSQVTGESASKGLPDGDKTVEPVLAASSVCSGNSVERASDDPVYNLKRKSRDNEESE 437
Query: 1216 GPSEEAEDESVGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCN 1389
PSE+AE+ESVGV+K P+R SGSKRSRAAEVHN S INEKMRALQELIPNCN
Sbjct: 438 CPSEDAEEESVGVKKAVPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCN 497
Query: 1390 K-VDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHM 1539
K VDKASMLDEAIEYLKTLQLQVQI+SMG G+YM MMLP +QHMH AHM
Sbjct: 498 KKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLPTGMQHMHAAHM 548
Score = 80.1 bits (196), Expect = 4e-12
Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPT-----NLPSDISIQGDIGCCELVYENGQVTMRNQAIRERK--- 549
MP SEL R A+G++D + + +D+S + ELV ENGQ+ M+ Q+ + R+
Sbjct: 1 MPLSELYRMARGKLDSSQDKNPSCSTDLSFVPENDFVELVLENGQILMQGQSSKARRIPA 60
Query: 550 ----------------GXXXXXXXXXXXXXXXXXXIDSVLNDFPLSAPPCDMSLDEDDNT 681
IDSVL++ P+S P +MSL++DD
Sbjct: 61 CNSLPSHCLPSHTPKTRDKDTGNGGTNTKMGKFGTIDSVLSEIPMSVPSAEMSLNQDDEV 120
Query: 682 VPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTS 861
VPWLN P + + Y SD LPE GV+ +E + ++ A+ RS + +C+ N+ +
Sbjct: 121 VPWLNYPVDQSLQSEY-SDFLPELSGVAVNETSTHSNFASFDRRSQSIRDSCTVSLNNGA 179
Query: 862 IKLQKNNSGQP 894
+ Q N S P
Sbjct: 180 VFEQGNPSKVP 190
>gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 207 bits (528), Expect = 1e-50
Identities = 166/446 (37%), Positives = 206/446 (46%), Gaps = 68/446 (15%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S + D P + + P ++ C P ++ S S A + +S A
Sbjct: 57 SAGDIDAKRPGTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAP 116
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------------- 972
+ SIK+QK P+ S +MNFS+F+R AA K N
Sbjct: 117 TSGGGFPSIKMQKQVPA-PSPINSSLMNFSHFARPAALVKANLQNVGMRASSGTSSMERM 175
Query: 973 ------------EKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPE-----------QSVA 1083
E ++H ++S V E P + S+P E +S
Sbjct: 176 QNKDKGSIGLPKETDSHCRPNMMSSKVEVKPTEVKPAEG-SVPAELPEEMSQEGDSKSDR 234
Query: 1084 RCR--------------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGP 1221
C EK EP VA+SSV SGNS ER S +P +LKRK +T +SEGP
Sbjct: 235 NCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGP 294
Query: 1222 SEEAEDESVGVQKTAPSRSG--SKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKV 1395
SE+AE+ESVG +K A +R+G SKR RAAEVHN S INEKMRALQELIPNCNKV
Sbjct: 295 SEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 354
Query: 1396 DKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQXXXXXXXXXX 1575
DKASMLDEAIEYLKTLQLQVQI+SMG GMYM MMLP + HMH AHM Q
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQ---FLPMGVG 411
Query: 1576 XXXXXXXXQPDVNS------MMQMPCIQPPYFPXXXXXXXXXXXXH-----QTPANLGQG 1722
PD+N M Q+P + +FP Q GQG
Sbjct: 412 MGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGSSLQMFGLSGQG 471
Query: 1723 LSASMGNVSGMPL---PNTSMNQLPN 1791
L S MP+ P N+ PN
Sbjct: 472 LPMSFPRAPLMPMSGGPPPKTNREPN 497
>gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 207 bits (528), Expect = 1e-50
Identities = 161/429 (37%), Positives = 202/429 (47%), Gaps = 60/429 (13%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S + D P + + P ++ C P ++ S S A + +S A
Sbjct: 57 SAGDIDAKRPGTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAP 116
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------------- 972
+ SIK+QK P+ S +MNFS+F+R AA K N
Sbjct: 117 TSGGGFPSIKMQKQVPA-PSPINSSLMNFSHFARPAALVKANLQNVGMRASSGTSSMERM 175
Query: 973 ------------EKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPE-----------QSVA 1083
E ++H ++S V E P + S+P E +S
Sbjct: 176 QNKDKGSIGLPKETDSHCRPNMMSSKVEVKPTEVKPAEG-SVPAELPEEMSQEGDSKSDR 234
Query: 1084 RCR--------------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGP 1221
C EK EP VA+SSV SGNS ER S +P +LKRK +T +SEGP
Sbjct: 235 NCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGP 294
Query: 1222 SEEAEDESVGVQKTAPSRSG--SKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKV 1395
SE+AE+ESVG +K A +R+G SKR RAAEVHN S INEKMRALQELIPNCNKV
Sbjct: 295 SEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 354
Query: 1396 DKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQXXXXXXXXXX 1575
DKASMLDEAIEYLKTLQLQVQI+SMG GMYM MMLP + HMH AHM Q
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQ---FLPMGVG 411
Query: 1576 XXXXXXXXQPDVNS------MMQMPCIQPPYFPXXXXXXXXXXXXHQTPANLGQGLSASM 1737
PD+N M Q+P + +FP P+ GLS
Sbjct: 412 MGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSG-- 469
Query: 1738 GNVSGMPLP 1764
G+P+P
Sbjct: 470 ---QGLPMP 475
>gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 207 bits (528), Expect = 1e-50
Identities = 165/446 (36%), Positives = 207/446 (46%), Gaps = 68/446 (15%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S + D P + + P ++ C P ++ S S A + +S A
Sbjct: 57 SAGDIDAKRPGTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAP 116
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------------- 972
+ SIK+QK P+ S +MNFS+F+R AA K N
Sbjct: 117 TSGGGFPSIKMQKQVPA-PSPINSSLMNFSHFARPAALVKANLQNVGMRASSGTSSMERM 175
Query: 973 ------------EKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPE-----------QSVA 1083
E ++H ++S V E P + S+P E +S
Sbjct: 176 QNKDKGSIGLPKETDSHCRPNMMSSKVEVKPTEVKPAEG-SVPAELPEEMSQEGDSKSDR 234
Query: 1084 RCR--------------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGP 1221
C EK EP VA+SSV SGNS ER S +P +LKRK +T +SEGP
Sbjct: 235 NCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGP 294
Query: 1222 SEEAEDESVGVQKTAPSRSG--SKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKV 1395
SE+AE+ESVG +K A +R+G SKR RAAEVHN S INEKMRALQELIPNCNKV
Sbjct: 295 SEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 354
Query: 1396 DKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQXXXXXXXXXX 1575
DKASMLDEAIEYLKTLQLQVQI+SMG G+YM MMLP + HMH AHM Q
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGAGIYMPSMMLPPGMPHMHAAHMGQ---FLPMGVG 411
Query: 1576 XXXXXXXXQPDVNS------MMQMPCIQPPYFPXXXXXXXXXXXXHQTPA-----NLGQG 1722
PD+N M Q+P + +FP P+ GQG
Sbjct: 412 MGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSPMSGPSALHGMGGPSLQMFGLSGQG 471
Query: 1723 LSASMGNVSGMPL---PNTSMNQLPN 1791
L S MP+ P N+ PN
Sbjct: 472 LPMSFPRAPLMPMSGGPPPKTNREPN 497
>ref|XP_002319450.2| hypothetical protein POPTR_0013s00310g [Populus trichocarpa]
gi|550324617|gb|EEE95373.2| hypothetical protein
POPTR_0013s00310g [Populus trichocarpa]
Length = 713
Score = 207 bits (527), Expect = 2e-50
Identities = 165/446 (36%), Positives = 207/446 (46%), Gaps = 68/446 (15%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S + D P + + P ++ C P ++ S S A + +S A
Sbjct: 181 SAGDIDAKRPRTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAP 240
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------------- 972
+ SIK+QK P+ S ++NFS+F+R AA K N
Sbjct: 241 TSGGGFPSIKMQKQVPA-PSPINSSLINFSHFARPAALVKANLQNVGMRASSGTSSMERM 299
Query: 973 ------------EKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPE-----------QSVA 1083
E ++H ++S V E P + S+P E +S
Sbjct: 300 QNKDKGSIGLPKETDSHCRPNMMSSKVEVKPTEVKPAEG-SVPAELPEEMSQEGDSKSDR 358
Query: 1084 RCR--------------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGP 1221
C EK EP VA+SSV SGNS ER S +P +LKRK +T +SEGP
Sbjct: 359 NCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGP 418
Query: 1222 SEEAEDESVGVQKTAPSRSG--SKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKV 1395
SE+AE+ESVG +K A +R+G SKR RAAEVHN S INEKMRALQELIPNCNKV
Sbjct: 419 SEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 478
Query: 1396 DKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQXXXXXXXXXX 1575
DKASMLDEAIEYLKTLQLQVQI+SMG GMYM MMLP + HMH AHM Q
Sbjct: 479 DKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQ---FLPMGVG 535
Query: 1576 XXXXXXXXQPDVNS------MMQMPCIQPPYFPXXXXXXXXXXXXHQTPA-----NLGQG 1722
PD+N M Q+P + +FP P+ GQG
Sbjct: 536 MGMGFRMGMPDMNGGYSGCPMYQVPPMHGAHFPGSQMSGPSALHGMGGPSLQMFGLSGQG 595
Query: 1723 LSASMGNVSGMPL---PNTSMNQLPN 1791
L S MP+ P N+ PN
Sbjct: 596 LPMSFPRAPLMPMSGGPPPKTNREPN 621
Score = 67.0 bits (162), Expect = 3e-08
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Frame = +1
Query: 394 MPFSELI-RFAKGEVDPTN-----LPSDISIQGDIGCCELVYENGQVTM-RNQAIRE--- 543
MP SEL+ R AKG+ D + +D+S + EL++ENGQ+ R + I+
Sbjct: 1 MPLSELLYRMAKGKTDSSQEKNPACSTDLSFVPENDFGELIWENGQIQYSRARKIQTCNS 60
Query: 544 --RKGXXXXXXXXXXXXXXXXXXIDSVLNDFPLSAPPCDMSLDEDDNTVPWLNCPAVEPF 717
K ++S LN+ L+ P ++ ++DD+ VPWLN P EP
Sbjct: 61 LPPKIRDKDIGNGTNTKTGKFGTMESTLNEL-LAVPAVEVRANQDDDMVPWLNYPLDEPL 119
Query: 718 NNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACS 840
+ YCSD LPE GV+ +E + ++ + RS N + S
Sbjct: 120 QHDYCSDFLPELSGVTVNEHSSQSNFPSFDKRSCNQSITDS 160
>gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 207 bits (526), Expect = 2e-50
Identities = 146/350 (41%), Positives = 180/350 (51%), Gaps = 54/350 (15%)
Frame = +1
Query: 658 SLDEDDNTVPWLNCPAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLAC 837
S + D P + + P ++ C P ++ S S A + +S A
Sbjct: 57 SAGDIDAKRPGTSASQLYPSSSEQCKTSFPFFRSRDSTKKDDSTSNAVHHVIAPDSIRAP 116
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTAGN--------------- 972
+ SIK+QK P+ S +MNFS+F+R AA K N
Sbjct: 117 TSGGGFPSIKMQKQVPA-PSPINSSLMNFSHFARPAALVKANLQNVGMRASSGTSSMERM 175
Query: 973 ------------EKNNHMGSAFVNSSVGFSQQESAPPKSDSIPPE-----------QSVA 1083
E ++H ++S V E P + S+P E +S
Sbjct: 176 QNKDKGSIGLPKETDSHCRPNMMSSKVEVKPTEVKPAEG-SVPAELPEEMSQEGDSKSDR 234
Query: 1084 RCR--------------EKAVEPAVATSSVCSGNSLERDSSNPLSSLKRKCFETGDSEGP 1221
C EK EP VA+SSV SGNS ER S +P +LKRK +T +SEGP
Sbjct: 235 NCHQNFGESAIKGLEDVEKTTEPLVASSSVGSGNSAERPSDDPTENLKRKHRDTEESEGP 294
Query: 1222 SEEAEDESVGVQKTAPSRSG--SKRSRAAEVHNQSXXXXXXXINEKMRALQELIPNCNKV 1395
SE+AE+ESVG +K A +R+G SKR RAAEVHN S INEKMRALQELIPNCNKV
Sbjct: 295 SEDAEEESVGAKKPASARAGNGSKRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKV 354
Query: 1396 DKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAHMPQ 1545
DKASMLDEAIEYLKTLQLQVQI+SMG GMYM MMLP + HMH AHM Q
Sbjct: 355 DKASMLDEAIEYLKTLQLQVQIMSMGAGMYMPSMMLPPGMPHMHAAHMGQ 404
>gb|EXB57555.1| hypothetical protein L484_022662 [Morus notabilis]
Length = 758
Score = 205 bits (521), Expect = 8e-50
Identities = 158/411 (38%), Positives = 194/411 (47%), Gaps = 86/411 (20%)
Frame = +1
Query: 787 NSTAAKAPRSANSDLACSEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQTA 966
N+T+A N S S+K+ P +N+ ++NFS+F+R AA K +
Sbjct: 229 NTTSAAHHAVCNDSGRVSSVGGFPSLKMHNRQDSIPPSNSFNVLNFSHFTRPAALAKASL 288
Query: 967 GN------------EK------NNHMGSAFVNSSVGFSQQESA-------------PPKS 1053
N EK NN S +++ G ++ SA P ++
Sbjct: 289 QNIGTMPGSNMPNKEKGCAANGNNPPKSGLIDTGSGLRKETSAHCQVVASSGVNLKPSEA 348
Query: 1054 DSIPP----EQSVARCREKA------------------------VEPAVATSSVCSGNSL 1149
S+ + S A CRE A +EP VA+SSVCSGNS+
Sbjct: 349 RSLEEPCAAKDSEAVCREDASKNDINNSFPCESTNRALPDGEKNIEPVVASSSVCSGNSV 408
Query: 1150 ERDSSNPLSSLKRKCFETGDSEGPSEEAEDESVGVQKTAPSR-SGSKRSRAAEVHNQSXX 1326
ER S +P LKRK +T DSE SE+ E+ESVGV+KTAP R SGSKRSRAAEVHN S
Sbjct: 409 ERASDDPTHVLKRKFRDTEDSECHSEDVEEESVGVKKTAPPRASGSKRSRAAEVHNLSER 468
Query: 1327 XXXXX-------------INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQILS 1467
INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI+S
Sbjct: 469 ILNGFFIFHLSEQRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMS 528
Query: 1468 MGTGMYMSQMMLPAALQHMHRAHMPQ-XXXXXXXXXXXXXXXXXXQPDVNS------MMQ 1626
MG G+ M MMLP +Q MH HM PD+N M Q
Sbjct: 529 MGAGLCMPPMMLPTGMQPMHAPHMTHFLPMGVGMGMGLGMGFGMGMPDMNGGSSGYPMFQ 588
Query: 1627 MPCIQPPYFPXXXXXXXXXXXXHQTPANL------GQGLSASMGNVSGMPL 1761
P +Q +FP T NL GQGLS M +P+
Sbjct: 589 FPPMQGAHFPGPPMPGHTAAFHGMTGPNLQVFGLPGQGLSMPMQRAPLVPV 639
Score = 86.3 bits (212), Expect = 5e-14
Identities = 79/273 (28%), Positives = 106/273 (38%), Gaps = 45/273 (16%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPTNLPSDISIQGDIGCCELVYENGQVTMRNQAIRERK-------- 549
MP SEL R AK VD D D+ ELV+ENGQ+T + Q+ R RK
Sbjct: 1 MPLSELYRLAKRRVDSNQ---DFENGNDV--FELVWENGQITTQGQSSRVRKEPTCNSLP 55
Query: 550 ----------GXXXXXXXXXXXXXXXXXXIDSVLNDFPLSAPPCDMSLDEDDNTVPWLNC 699
+DSVLN+ P+S P + L DD+ +PWLN
Sbjct: 56 SHCLPSYTPKSRDKDLGNGTTTKTGKFGTVDSVLNEIPMSVPSDGVGLSHDDDMMPWLNY 115
Query: 700 PAVEPFNNVYCSDILPESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNSTSIKL--- 870
P + YC D LPE GV+ +E + SN+ A +S+ + L NS
Sbjct: 116 PMDGSLQHEYCRDFLPELSGVTVNEISKSNNNFATNDKSSCNQLYRESNANSVDYCASLE 175
Query: 871 QKNNSG------------QPNNNASGIMNFS-------YFSRFAANCKQTAGNEKNNHMG 993
Q+NNS +P S + + S F F + T G+ +
Sbjct: 176 QRNNSSKVGSVVASDVSTRPRTGTSQLYSSSSSQQCQASFPSFRSRVLDTVGDNTTSAAH 235
Query: 994 SAFVN-----SSVGFSQQESAPPKSDSIPPEQS 1077
A N SSVG + DSIPP S
Sbjct: 236 HAVCNDSGRVSSVGGFPSLKMHNRQDSIPPSNS 268
>ref|XP_006604778.1| PREDICTED: transcription factor PIF3-like isoform X1 [Glycine max]
gi|571559871|ref|XP_006604779.1| PREDICTED: transcription
factor PIF3-like isoform X2 [Glycine max]
Length = 633
Score = 205 bits (521), Expect = 8e-50
Identities = 168/518 (32%), Positives = 233/518 (44%), Gaps = 100/518 (19%)
Frame = +1
Query: 394 MPFSELIRFAKGEVDPTNLPS-----DISIQGDIGCCELVYENGQVTMRNQAIRERKGXX 558
MP EL R AKG++DP + + D S + ELV+E GQ++++ Q R R
Sbjct: 1 MPLHELYRVAKGKLDPIEMNNNTCAVDQSSVPNNDLLELVWEKGQISVQGQFSRARVSPN 60
Query: 559 XXXXXXXXXXXXXXXX-----------------IDSVLNDFPLSAPP--CDMSLDEDDNT 681
+ LN+ P D+S +E+D
Sbjct: 61 CKTLPSHCLPSHTPIGYANNAISTNTRMGKCGNLGVELNEIRRLVPSGEVDLSEEEEDMV 120
Query: 682 VPWLNCPAVEPFNNVYCSDIL--PESFGVSGSEFAHSNSTAAKAPRSANSDLACSEFKNS 855
+PW N + + Y +D P S+GV+ +E + SN+ + R+ + + K+S
Sbjct: 121 MPWFNYGMEDSLQHGYSTDFFHEPSSYGVTMNELSASNNFSLLDRRNNCTKIFRDTHKHS 180
Query: 856 TSIKLQKNNSGQPNNNASGI--------------------------MNFSYFSRFAANCK 957
+ ++ + + NNA+ + MNFS+F++ AA K
Sbjct: 181 SYAPVRSSVADIAENNANNVPSGSSGFSSLKMERQGPVMCSSSSTMMNFSHFAKPAAIVK 240
Query: 958 QTAGN----EKNNHMG------SAFVNSSVGFSQQE---SAPPKSDSIPPEQSVA----- 1083
N ++ + G +A V + ++ E P K + +Q V
Sbjct: 241 ANIENIGLASRSGNEGIQIKSAAATVTNPAESTKVELSGECPKKPATHNQDQDVTVSTKC 300
Query: 1084 --RCR--------------------------EKAVEPAVATSSVCSGNSLERDSSNPLSS 1179
C+ EK VE AV +SSVCSGN ER S +P +
Sbjct: 301 DPSCKDVSKVDQNQTSNLVVGESVNKGHEAVEKGVELAVVSSSVCSGNGPERGSEDPNQN 360
Query: 1180 LKRKCFETGDSEGPSEEAEDESVGVQKTAPSR-SGSKRSRAAEVHNQSXXXXXXXINEKM 1356
LKRK +T D E SE+ E+ESVGV K P+R +G+K+SR+AEVHN S INEKM
Sbjct: 361 LKRKSKDTEDFESQSEDVEEESVGVNKEVPARRNGAKKSRSAEVHNLSERRRRDRINEKM 420
Query: 1357 RALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQHMHRAH 1536
RALQELIPNCNK DKASMLDEAIEYLKTLQLQ+QI+SMGT + M MML +QHMH H
Sbjct: 421 RALQELIPNCNKADKASMLDEAIEYLKTLQLQLQIMSMGTSLCMPAMMLHPGMQHMHAPH 480
Query: 1537 M-PQXXXXXXXXXXXXXXXXXXQPDVNSMMQMPCIQPP 1647
M P PD N + IQ P
Sbjct: 481 MGPFSPIGVGMQMRLGVGCGMGMPDANDIESSRFIQVP 518
>ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3
[Medicago truncatula]
Length = 721
Score = 203 bits (517), Expect = 2e-49
Identities = 136/306 (44%), Positives = 165/306 (53%), Gaps = 72/306 (23%)
Frame = +1
Query: 838 SEFKNSTSIKLQKNNSGQPNNNASGIMNFSYFSRFAANCKQT------------------ 963
S + +S+K QK + P N S +MNFS+F+R AA +
Sbjct: 245 SSSSDFSSLKAQKQDPVMPGNG-SNVMNFSHFARPAAIVRANLQNIGLKSGLNSASARSD 303
Query: 964 --------AGNEKNNHMGSAFVNSSVGFSQQESA-------PPKSD------------SI 1062
A + +N SA VN S S++ P K+D ++
Sbjct: 304 IMGVKNKGAASTSSNPPDSALVNPSGECSKEPEMRCHKVVEPSKADLKPLQPKSLEPNAV 363
Query: 1063 PPEQSVARCRE-------------------------KAVEPAVATSSVCSGNSLERDSSN 1167
+QS C+E K +E AVA+SSVCSGN +R S +
Sbjct: 364 ATKQSKPACKENGIKNDQPSIQVLGDNGAKGHAAADKGMEVAVASSSVCSGNGADRGSDD 423
Query: 1168 PLSSLKRKCFETGDSEGPSEEAEDESVGVQKTAPSR--SGSKRSRAAEVHNQSXXXXXXX 1341
P LKRK +T DSE SE+ EDESVGV+K A R +GSKRSRAAEVHN S
Sbjct: 424 PNRDLKRKSRDTEDSECHSEDVEDESVGVKKGAAGRGVAGSKRSRAAEVHNLSERRRRDR 483
Query: 1342 INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQILSMGTGMYMSQMMLPAALQH 1521
INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQ++SMG G+YM QMMLPA +QH
Sbjct: 484 INEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMMSMGAGLYMPQMMLPAGMQH 543
Query: 1522 MHRAHM 1539
MH HM
Sbjct: 544 MHAPHM 549