BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00009402
         (3128 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...  1435   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1427   0.0  
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1415   0.0  
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...  1413   0.0  
gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]      1386   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...  1386   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1379   0.0  
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1371   0.0  
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1369   0.0  
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    1368   0.0  
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]      1367   0.0  
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]  1367   0.0  
gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus pe...  1360   0.0  
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1359   0.0  
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1359   0.0  
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1359   0.0  
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1353   0.0  
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...  1347   0.0  
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...  1330   0.0  
gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus...  1329   0.0  

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score = 1435 bits (3715), Expect = 0.0
 Identities = 685/1001 (68%), Positives = 815/1001 (81%), Gaps = 4/1001 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M ++GS K+ V+TQ+S GGF+ ++TA+ L ++L+  +G+ VWRCR+KTS TPP+SYP F 
Sbjct: 1    MEAEGSAKETVVTQVSVGGFDIHVTAKDLLEYLDRAIGL-VWRCRLKTSWTPPESYPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +     +    +Y +VVPHAFVHF+  +S    + A GR +L L  K L VS+GPKNPF 
Sbjct: 60   ITDITKIERTEDYRRVVPHAFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFT 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+KL +VG +IG  VSRDE  VGWRGP SGVDF +DPFD TC+  F+++ A
Sbjct: 120  LNQRRRTTTPFKLSDVGFEIGNLVSRDEFFVGWRGPPSGVDFLVDPFDGTCKFCFSRNTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+ K  ++ AVIKCDFK+EFLVRD+ ++ QYT                 +YRTADDDI  
Sbjct: 180  FSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLLLQLASAPWVWYRTADDDIEA 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPF--- 984
             VPFDLLDDDDPWIRTTDFT  GAIGRC SY++++PPR+G +L+KAV YLKERRV     
Sbjct: 240  WVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGSKLRKAVKYLKERRVQVLQE 299

Query: 985  EQRKERLRLRDEPNFGTPMLDPFYCIQH-EGLSFSVTFLLNAVIHKGVFNQHQLTSGLFG 1161
            E  + R+R+ DEP+FG PM DPF+CI H EG++F V FL+NAV+HKG+FNQHQL++  F 
Sbjct: 300  ENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLVNAVMHKGIFNQHQLSNDFFD 359

Query: 1162 LLRSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRL 1341
            LLR+Q   VNV+AL+HIC+YR PVF+A++RLKAVQEWL+KNP L K PK+ GDVV+IRRL
Sbjct: 360  LLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDVVEIRRL 419

Query: 1342 IITPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDI 1521
            +ITPTKAYCLPPEVELSNRVLR YKDV+DRFLRVTF DEG+Q +N+NVLNYY APIV+DI
Sbjct: 420  VITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVAPIVRDI 479

Query: 1522 TKSFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVF 1701
            T +   Q+T +++RV SIL EGFYLCGR YSFLAFS+NQL+D+SAWFF+E+   RN++V 
Sbjct: 480  TSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEE---RNISVL 536

Query: 1702 NIRSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGII 1881
            +++SWMGKFTNRN+AKC ARMG CFSSTYAT+EVP  E N   PDIERN YVFSDGIGII
Sbjct: 537  DVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGIGII 596

Query: 1882 TPDLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTM 2061
            TPDLA EVA+KL+L  +PPCAYQIRYAGCKGVVACWP K DG RL LRPSM KF+SNHT 
Sbjct: 597  TPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQSNHTT 656

Query: 2062 LEICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTES 2241
            LEICSWTRFQPGFLNRQI+TLLS L VPD VFW+MQETM+++LN MF + DVAF VLT S
Sbjct: 657  LEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDVLTAS 716

Query: 2242 CAEQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDEL 2421
            CA+QGN AAIMLS+GFKP  EP+LRGMLTC+RAAQL DLREK RIFVPSGRWLMGC DEL
Sbjct: 717  CADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGCLDEL 776

Query: 2422 AVLEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEA 2601
             +LEQGQCFIQVS  SLEKCF KHG++FS+ ++ LQV+KG VV+AKNPCLHPGD+RVLEA
Sbjct: 777  GMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEA 836

Query: 2602 VDVPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDS 2781
            VDVPGLHHLYDC +FPQKG+RPH NEASGSDLDGDLYFVTWD+NLIPPSK SW PM YD+
Sbjct: 837  VDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDA 896

Query: 2782 APAKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAAT 2961
            A AK L R V   DIIEFF++NMVND+LGAICNAHVVHAD S YGA D  CL LAELAAT
Sbjct: 897  AEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAAT 956

Query: 2962 AVDFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            AVDFPKTGK+VSMP  LKPK+YPDFMGK E  SYKS+K+LG
Sbjct: 957  AVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILG 997


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score = 1427 bits (3693), Expect = 0.0
 Identities = 682/998 (68%), Positives = 805/998 (80%), Gaps = 1/998 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M ++GS K+ V+TQ+S GGF+ ++TA+ L ++LE E+G+ VWRCR+KTS TPP+SYP F 
Sbjct: 1    METEGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGL-VWRCRLKTSWTPPESYPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +     +    +Y +V PHAFVHF+  +S    ++A  R +L L  K L  S+GP+NPF 
Sbjct: 60   ITDITKITRTEDYRRVEPHAFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFT 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR T P+KL  VG++IG  VSRDE  VGWRGP +GVDF +DPFD TCR  F+++ A
Sbjct: 120  LNQRRRKTTPFKLSGVGVEIGTLVSRDEFFVGWRGPPTGVDFLVDPFDGTCRFCFSRNTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FK   + AVIKCDFK+EFLVRD+ ++KQYT                 +YRTADDDI V
Sbjct: 180  FSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLLLQLASAPRVWYRTADDDIEV 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            SVPFDLLDDDDPWIRTTDFT  GAIGRC SY++++PPR+GP+L+KAV +LKERRV  E  
Sbjct: 240  SVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHGPKLRKAVDFLKERRVQEEYL 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQH-EGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
            +  +R+RDEP+FG PM DPF+CI H EG++F V FL+NAV+HKG+FNQHQL++  F LLR
Sbjct: 300  RRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAVMHKGIFNQHQLSNDFFDLLR 359

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
            +Q   VNVAAL+HI  YR PVFDA+K+LK  QEWL+KNPK  K  K+  D+ +IRRL+IT
Sbjct: 360  NQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDIAEIRRLVIT 419

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PTKAYCLPPEVELSNRVLR YKDV+DRFLRVTF DEG+QT+N+N LNY+AAPIV+ IT  
Sbjct: 420  PTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAAPIVRAITSY 479

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
               Q+T +++RV SIL EGFYLCGR YSFLAFSSNQL+DRSAWFFAED   RN+ V  I+
Sbjct: 480  SFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAED---RNINVMAIK 536

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
            SWMGKFTN+N+AKC ARMG CFSSTYAT+EVP  E N   PDI+RN Y FSDGIG+ITPD
Sbjct: 537  SWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGIGMITPD 596

Query: 1891 LAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEI 2070
            LA EVA+KL+   +PPCAYQIRYAGCKGVVACWP + DG RL LR SM KF+SNHT+LEI
Sbjct: 597  LAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQSNHTILEI 656

Query: 2071 CSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAE 2250
            CSWTRFQPGFLNRQI+TLLSAL VPD VFW+MQE M+++LN M  D DVAF VLT SCAE
Sbjct: 657  CSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDVLTASCAE 716

Query: 2251 QGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVL 2430
            QGN AAIMLS+GFKPQ EP+LRGMLTC+RAAQL  LREKARIFVPSGRWLMGC DEL VL
Sbjct: 717  QGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGCLDELGVL 776

Query: 2431 EQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDV 2610
            EQGQCFIQVS   LE CF KHGS+FS+ K+ LQVVKG VV+AKNPCLHPGDIR+LEAVD 
Sbjct: 777  EQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDA 836

Query: 2611 PGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPA 2790
            PGLHHLYDC +FPQKG+RPHANEASGSDLDGDLYFVTWD+NLIPPSK SW PM YD+A A
Sbjct: 837  PGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEA 896

Query: 2791 KELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVD 2970
            K+L R V   DI+EFF++NM N++LGAICNAHVV AD S YGALD+ CL LAELAATAVD
Sbjct: 897  KQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVD 956

Query: 2971 FPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            FPKTGK+VSMP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 957  FPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILG 994


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1415 bits (3662), Expect = 0.0
 Identities = 688/1000 (68%), Positives = 813/1000 (81%), Gaps = 3/1000 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEKDMV+TQ+S GGF+ Y+TA  L  +LE+ +G SV RCR+KTSSTPP+SYP+F 
Sbjct: 1    MESEGSEKDMVVTQISIGGFDQYVTATELTYYLEDTIG-SVDRCRLKTSSTPPESYPDFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +  T  +    +Y+KV PHAFVHF S ++  W L+A G+ +L L GKPL VS+GP+ PF 
Sbjct: 60   IIDTAKIERTEDYKKVEPHAFVHFVSPEAATWALDAAGKSELFLHGKPLKVSLGPETPFH 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V ++IGI VSRDE   GWRGP+SGVDF +DPFD TC+  FTKD A
Sbjct: 120  LNQRRRTTFPFKFPDVRLEIGILVSRDEYFAGWRGPSSGVDFLVDPFDGTCKFLFTKDTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FKG  K AVIKC+FK+EFLVR++ +V+Q                   YYRTADDDI  
Sbjct: 180  FSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILLLQLSSSPFVYYRTADDDIEE 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPF--E 987
            +VPFDLLDDDDPWIRTTDFT  GAIGRC SY+I++PPR G +L+KA+ YL+ RRV    +
Sbjct: 240  TVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYGAKLKKAMDYLRARRVNVLED 299

Query: 988  QRKERLRLRDEPNFGTPMLDPFYCIQH-EGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGL 1164
              K +LR+RDEP+FG PM DPF+CIQH EG+ F V FL+NAV+HKG+ NQHQL+   F L
Sbjct: 300  SPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLVNAVMHKGIINQHQLSDKFFDL 359

Query: 1165 LRSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLI 1344
            LRSQ + +N+AAL+HICSYRHPVFDA++RLK V +WL+KNPKLLK+PK   D+V++RRL+
Sbjct: 360  LRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDIVEVRRLV 419

Query: 1345 ITPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDIT 1524
            ITP+KAYCLPPEVELSNRVLR+YK+VSDRFLRVTF DEGMQT+N NVLNYY APIVK IT
Sbjct: 420  ITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVAPIVKVIT 479

Query: 1525 KSFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFN 1704
             +   Q+T V++RV +IL +GFYLCGR YSFLAFSSNQL+DRSAWFFAEDK     +V  
Sbjct: 480  SNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDK---KTSVRA 536

Query: 1705 IRSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIIT 1884
            I+SWMGKFTNRNVAKC ARMG CFSSTYATVEVPS E  +L PDI+RN Y FSDGIG I 
Sbjct: 537  IKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVKEL-PDIKRNGYDFSDGIGKIV 595

Query: 1885 PDLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTML 2064
            PDLAMEVA+KL+L +  P AYQIRYAGCKGVVACWP   DG RL  RPSM KF S+HT+L
Sbjct: 596  PDLAMEVAEKLKL-EGTPSAYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLSDHTIL 654

Query: 2065 EICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESC 2244
            EICSWTRFQPGFLNRQIVTLLSAL VPD +FW+MQE+M+++LN M TD DVAF VL  SC
Sbjct: 655  EICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDVLIASC 714

Query: 2245 AEQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELA 2424
            AEQGNTAAIMLS+GFKPQTEP+L+GMLTCIRAAQ   LREKARIFVPSGRWLMGC DEL 
Sbjct: 715  AEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGCLDELG 774

Query: 2425 VLEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAV 2604
            VLEQGQCFIQVS PSLE CF KHGS+FS  ++ L+V+KG+V +AKNPCLHPGD+R+LEAV
Sbjct: 775  VLEQGQCFIQVSSPSLENCFLKHGSRFS-AQKNLKVIKGIVAIAKNPCLHPGDVRILEAV 833

Query: 2605 DVPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSA 2784
            D PGL HL DC +FPQKGDRPH+NEASGSDLDGDLYFVTW++ LIPPSK SWPPM YDSA
Sbjct: 834  DAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQYDSA 893

Query: 2785 PAKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATA 2964
             AK L R+V   DII+FF++NMVN++LGAICNAHVVHAD S YGALD+ CL LAE AATA
Sbjct: 894  EAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAERAATA 953

Query: 2965 VDFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            VDFPKTGKLV++P  LKPK+YPDFMGK E  +Y+S K+LG
Sbjct: 954  VDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNKILG 993


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score = 1413 bits (3658), Expect = 0.0
 Identities = 678/998 (67%), Positives = 800/998 (80%), Gaps = 1/998 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M +   EK+ V+TQ+SFGGF+  +TAR L  +L+NE+G  VWRCR+KTS TPP+SYP F 
Sbjct: 1    METKRREKETVVTQVSFGGFDKDVTARDLVAYLDNEIG-QVWRCRLKTSWTPPESYPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +  T  +     Y +V PHAFVHF+S  S  W   A G  +L   G+P+ VS+GP+NPF 
Sbjct: 60   ITDTAVIQRVDAYRRVEPHAFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFH 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+KL +V ++IG  VSRDE LVGWRGP SGVDF +DPFD  C+  FT+D A
Sbjct: 120  LNQRRRTTIPFKLSDVHVEIGTLVSRDEFLVGWRGPPSGVDFLVDPFDGKCKFCFTRDTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FKG  + AVI+CDFKLEFLVRD+ ++KQYT                 +YRTADDDI V
Sbjct: 180  FSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVILLQLASAPSVWYRTADDDIEV 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
             VPFDLLDDDDPWIRTTDFT  GAIGRC SY++++PPR+G +L++A+ +L+ERRV  +  
Sbjct: 240  LVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGAKLKRALNFLRERRVQEDCL 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQHE-GLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
            +  L +  EP +  PM DPF+CI HE G+ F++ FL+NAV+HKG+FNQHQL+   F LLR
Sbjct: 300  RRPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNAVMHKGIFNQHQLSDSFFDLLR 359

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
            +Q   VN+AAL HICSY+HPVFDAHKRLKAVQ+WL+KNPKL ++ K+  D+V+IRRL IT
Sbjct: 360  NQPLDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDIVEIRRLAIT 419

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PT+AYCLPPEVELSNRVLR YKD++D+FLRVTF DEG+QT+N N L YY APIV+DIT +
Sbjct: 420  PTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCAPIVRDITSN 479

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
               Q+T +++RV SIL +GFYLCGR YSFLAFSSNQL+DRSAWFFAED      +V  IR
Sbjct: 480  SFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDG---KTSVSKIR 536

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
            +WMGKFTNRN+AKC ARMG CFSSTYATVEVPS EA    PDIERNNY+FSDGIG+ITPD
Sbjct: 537  NWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGIGMITPD 596

Query: 1891 LAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEI 2070
            LA EVA+KL+L  NPPCAYQIRYAGCKGVVACWP   DG RL LR SM KF SNHT LEI
Sbjct: 597  LAKEVAEKLKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHSNHTTLEI 656

Query: 2071 CSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAE 2250
            CSWTRFQPGFLNRQI+TLLS L VPD++FW+MQ  M+++LN MF D DVAF V+T SCAE
Sbjct: 657  CSWTRFQPGFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDVVTASCAE 716

Query: 2251 QGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVL 2430
            QGNTAAIMLS+GF P+TEP+L GMLTCIRAAQL  LREK RIFVPSGRWLMGC DEL VL
Sbjct: 717  QGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGCLDELGVL 776

Query: 2431 EQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDV 2610
            E GQCFIQVS PSLE CF KHGS+FS+ K++LQVVKG VVVAKNPCLHPGDIR+LEAVD 
Sbjct: 777  EHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDA 836

Query: 2611 PGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPA 2790
            P LHHL+DC +FPQKGDRPH NEASGSDLDGDLYFVTWD+NLIPPSK SW PM YD+A A
Sbjct: 837  PELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEA 896

Query: 2791 KELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVD 2970
            K+L R V   DII+FF++NMVN++LGAICNAHVVHAD S YGALD+ C+KLAELAATAVD
Sbjct: 897  KQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVD 956

Query: 2971 FPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            FPKTGKLV+MP  LKPKLYPDFMGK +  SY S K+LG
Sbjct: 957  FPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILG 994


>gb|EOY29490.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
          Length = 1197

 Score = 1386 bits (3588), Expect = 0.0
 Identities = 664/998 (66%), Positives = 793/998 (79%), Gaps = 1/998 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S GSEKD V+TQ+S GGF  ++ A+ L ++ +NEVGV VWRCR+KTS TPP+SYP F 
Sbjct: 1    MESQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGV-VWRCRLKTSWTPPESYPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +  +  +    +Y+KV PHAFVHF+S  +  W ++A GR +L    + L VS+GP+NP+ 
Sbjct: 60   ILDSTVIQRTDDYKKVEPHAFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYY 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            +++RRR+T P+KL +V +DIG  VSRDE  VGWRGP  GVDF +DPFD TC+  F++D A
Sbjct: 120  LNRRRRNTTPFKLSDVCLDIGGMVSRDEFFVGWRGPPFGVDFLVDPFDGTCKFCFSRDTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FKG  + AVIKCDFK+EFLVRD+ ++KQYT                 +YRTADD+I  
Sbjct: 180  FSFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVFLQLASSPRVWYRTADDEIEE 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            SVPFDLLDDDD WIRTTDFT  GAIGRC +Y++ + PR+G +L+KA+ YL+E+RVP +  
Sbjct: 240  SVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHGAKLKKALDYLREQRVPMDYV 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQH-EGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
            +  LR+ DEP+FG  M DPFYCI + EG+ F + FL+NAV+HKG+FNQHQL+   F LLR
Sbjct: 300  RWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNAVMHKGIFNQHQLSEDFFNLLR 359

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
             Q   VNVAAL+HI SYR PVFDA+KRLK V +WL++NP L K+PK+  D+V+IRRL+IT
Sbjct: 360  DQPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDIVEIRRLVIT 419

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PTKA+CL PEVELSNRVLR YK+V+DRFLRVTF DEGMQT+N NVL YYAA IV+D+T +
Sbjct: 420  PTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAASIVRDVTST 479

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
            F  Q+T V++RV SIL +GFYLCGR YSFLAFS+NQL+D SAWFFAED      +V  I 
Sbjct: 480  FFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDG---KTSVLQIL 536

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
             WMGKFTNRN+AKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG ITPD
Sbjct: 537  RWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGIGKITPD 596

Query: 1891 LAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEI 2070
            LA EVAQKL+L  NPPCAYQIRYAGCKGVVACWP + DG RL LR SM KF S+HT LEI
Sbjct: 597  LAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEEGDGVRLSLRCSMNKFFSDHTTLEI 656

Query: 2071 CSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAE 2250
            CSWTRFQPGFLNRQI+TLLS   VPD+VFW MQ TM+++LN +  D DVAF VLT SC+E
Sbjct: 657  CSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEVLTSSCSE 716

Query: 2251 QGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVL 2430
            QGN AAIMLS+GFKPQTEP+LRG+LTC+RA+QL  LREKARIFVPSGRWLMG  DEL VL
Sbjct: 717  QGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGVLDELGVL 776

Query: 2431 EQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDV 2610
            EQGQCFIQVS PS+E CF KHGS+F++ K+  +V++GLVV+AKNPCLHPGDIR+LEAVD 
Sbjct: 777  EQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDA 836

Query: 2611 PGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPA 2790
            PGLHHLYDC +FPQKG+RPH NEASGSDLDGDLYFVTW+  LIPP K SWPPM YD    
Sbjct: 837  PGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGET 896

Query: 2791 KELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVD 2970
            KE+ R+V   DII+FF++NMVN+ LG ICNAHVVHAD S YGALD+ C+ LAELAATAVD
Sbjct: 897  KEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVD 956

Query: 2971 FPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            FPKTGK+VSMP +LKPKLYPDFMGK E  SYKS+K+LG
Sbjct: 957  FPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILG 994


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 1386 bits (3588), Expect = 0.0
 Identities = 665/999 (66%), Positives = 804/999 (80%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEKD+V+TQ+S GGF++ + A+ L+++LE +VG  VWRCR+K S+TPPDSYP + 
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVG-QVWRCRLKISATPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            V +   VH   +YEKVVPHAFVHF+S +S  + L A G   L L  KPLIVS+GP+NP+R
Sbjct: 60   VDAAR-VHRMKDYEKVVPHAFVHFASSESAKYALAAAGGNGLILGKKPLIVSLGPENPYR 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V +++G+ VS+D+ +VGWRGP +GVDFF+DPF+  C+I FTKD A
Sbjct: 119  LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGACKILFTKDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+F+G+ K A+IKC+FK+EF+VR++ ++K++                  +YRTADDDI  
Sbjct: 179  FSFRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVILLQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQ- 990
            SV FDLLDDDD WIRTTD T  GAIGRC +Y+I++ PRNGP  +KA+ Y    RVP  + 
Sbjct: 239  SVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEM 298

Query: 991  -RKERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
              ++ LR+RDEP+FG  M DPF+C Q+EG+SF V FL+NAV+HKG+ NQHQ+T+  F LL
Sbjct: 299  CNRKMLRVRDEPDFGVSMSDPFFCFQNEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            RS  E VN+AAL+H+ SY+ PV DA ++L  +Q+WL+KNPKLL+      D+V++RRL+I
Sbjct: 359  RSHQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR+YK V+DRFLRVTF DEGM+ LN NVL YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            + + QRT +++RV SIL  GF+LCGR YSFLAFS+NQL+DRSAWFFAED     + V  I
Sbjct: 479  NSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDP---KIRVPGI 535

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
             SWMG+F+NRNVAKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG+I+ 
Sbjct: 536  ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DLA+EVA+KL LS NPP AYQIRYAGCKGVVACWP K DG  L LRPSM KF+SNHT+LE
Sbjct: 596  DLALEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGILLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQIVTLLS+L V D +FW MQ+ M++ LN M  D DVAF V+T SCA
Sbjct: 656  ICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLNKMLVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAAIMLS+GFKPQ+EP+LRGML+ IRA+QLGDLR KARIFVPSGRWLMGC DEL  
Sbjct: 716  EAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHG +FSD+K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VPGLHHLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PM+Y+ A 
Sbjct: 836  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
             K+L R V   DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1379 bits (3568), Expect = 0.0
 Identities = 664/999 (66%), Positives = 802/999 (80%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEKD+V+TQ+S GGF++ + A+ L+++LE +VG  VWRCR+K SSTPPDSYP F 
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVG-QVWRCRLKISSTPPDSYPTFD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            V +   V    +YEKVVPHAFVHF+S +S    L A G  +L L  KPLIVS+GP+NP+R
Sbjct: 60   VDAER-VQRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYR 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V I++G+ VS+D+ +VGWRGP +GVDF +DPF+  C+I FTKD A
Sbjct: 119  LNQRRRTTMPFKFSDVSIEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGACKILFTKDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+F+G+ + A+IKC+FK+EFLVR++ ++K+                   +YRTADDDI  
Sbjct: 179  FSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQ- 990
            SV FDLLDDDD WIRTTD T  GAIGRC +Y+I++ PRNGP  +KA+ Y    RVP  + 
Sbjct: 239  SVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEM 298

Query: 991  -RKERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
              ++ LR+RDEP+FG  M DPF+C Q+EG+SF V FL+NAV+HKG+ NQHQ+T+  F LL
Sbjct: 299  CNRKMLRVRDEPDFGVSMSDPFFCFQNEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            RS  E VN+AAL+H+ SY+ PV DA ++L  +++WL+KNPKLL+      D+V++RRL+I
Sbjct: 359  RSHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKNPKLLERTGELDDIVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR+YK V+DRFLRVTF DEGM+ LN NVL YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            + + QRT +++RV SIL  GF+LCGR YSFLAFS+NQL+DRSAWFFAED     + V  I
Sbjct: 479  NSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDP---KIRVPGI 535

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
             SWMG+F+NRNVAKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG+I+ 
Sbjct: 536  ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DLA+EVA+KL LS NPP AYQIRYAGCKGVVACWP K DG RL LRPSM KF+SNHT+LE
Sbjct: 596  DLAVEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQIVTLLS+L V D +FW MQ+ M++ L+ M  D DVAF V+T SCA
Sbjct: 656  ICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAAIMLS+GFKPQ+EP+LRGML+ IRA+QLGDLR KARIFVPSGRWLMGC DEL  
Sbjct: 716  EAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHG +FSD+K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VPGLHHLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PM+Y+ A 
Sbjct: 836  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
             K++ R V   DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA AV
Sbjct: 896  VKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1371 bits (3548), Expect = 0.0
 Identities = 660/999 (66%), Positives = 801/999 (80%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEK++V+TQ+S GGF++ + A+ L+++LE +VG  VWRCR+K SSTPPDSYP + 
Sbjct: 1    MGSEGSEKELVVTQISGGGFDNDVNAKMLSEYLEEQVG-QVWRCRLKISSTPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            + +   V     YEKVVPHAFVHF+S +S    L A G  +L L  KPLIVS+GP+NP+R
Sbjct: 60   IDAEK-VQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYR 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V +++G+ VS+D+ +VGWRGP +GVDFF+DPF+ TC+I FTKD A
Sbjct: 119  LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFFVDPFNGTCKILFTKDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+F+G+ + A+IKC+FK+EF+VR++ ++K+                   +YRTADDDI  
Sbjct: 179  FSFRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVILLQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQ- 990
            SV FDLLDDDD WIRTTD T  GAIGRC +Y+I++ PRNGP  +KA+ Y    RVP  + 
Sbjct: 239  SVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEM 298

Query: 991  -RKERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
              ++ LR++DEP+FG  M DPF+C Q+EG+SF V FL+NAV+HKG+ NQHQ+T+  F LL
Sbjct: 299  CNRKMLRVKDEPDFGVSMSDPFFCFQNEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            RS+ E VN AAL+H+ SY+ PV DA ++L  +Q+WL+KNPKLL       D+V++RRL+I
Sbjct: 359  RSRQEEVNSAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLDRTGELDDIVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR+YK V+DRFLRVTF DEGM+ LN NVL YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            + + QRT +++RV SIL +GF+LCGR YSFLAFS+NQL+DRSAWFFAED     + V  I
Sbjct: 479  NSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDP---KIRVPGI 535

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
             SWMG+F+NRNVAKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG+I+ 
Sbjct: 536  ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELPDIERNGYVFSDGIGMISA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DLA+EVA+KL LS NPP AYQIRYAGCKGVVACWP K DG RL LRPSM KF+SNHT+LE
Sbjct: 596  DLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQIVTLLS+L V D +FW MQ+ M++ L+ M  D DVAF V+T SCA
Sbjct: 656  ICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAAIMLS+GFKPQ+EP+LRGML+ IRA+QLGDLR KARIFVPSGRWLMGC DEL  
Sbjct: 716  EAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHG +FSD+K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VP L HLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PM+Y+ A 
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
             K+L R V   DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1369 bits (3544), Expect = 0.0
 Identities = 658/999 (65%), Positives = 802/999 (80%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEKD+V+TQ+S GGF++ + A+ L+++LE +VG  VWRCR+K S+TPPDSYP + 
Sbjct: 1    MGSEGSEKDLVVTQISVGGFDNDVNAKMLSEYLEEQVG-QVWRCRLKISATPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            + +   VH   +YEKVVPHAFVHF+S +S    L A G  +L L  KPLIVS+GP+NP+R
Sbjct: 60   IDAER-VHRMKDYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYR 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V +++G+ VS+D+ +VGWRGP +GVDF +DPF+ TC+I FTKD A
Sbjct: 119  LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+F+G+ + A+IKC+FK+EFLVR++ ++K+                   +YRTADDDI  
Sbjct: 179  FSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQ- 990
            SV FDLLDDDD WIRTTD T  GAIGRC +Y+I++ PRNGP  +KA+ Y   RRVP  + 
Sbjct: 239  SVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEM 298

Query: 991  -RKERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
              ++ LR++DEP+FG  M DPF+C Q+EG+SF V FL+NAV+HKG+ NQHQ+T+  F LL
Sbjct: 299  CNRKMLRVKDEPDFGVSMSDPFFCFQNEGISFKVMFLVNAVLHKGIVNQHQMTNEFFYLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            RS+ E VN+AAL+H+ SY+ PV DA ++L  +Q+WL+KNPKLL+      D+V++RRL+I
Sbjct: 359  RSRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKNPKLLERTGELDDIVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR+YK V+DRFLRVTF DEGM+ LN NVL YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            + + QRT +++RV SIL  GF+LCGR YSFLAFS+NQL+DRSAWFFAED     + V  I
Sbjct: 479  NSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLRDRSAWFFAEDP---KIRVPGI 535

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
             SWMG+F+NRNVAKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG+I+ 
Sbjct: 536  ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DLA+EVA+KL L+ NPP AYQIRYAG KGVVACWP K DG  L LRPSM KF+SNHT+LE
Sbjct: 596  DLAIEVAEKLHLNVNPPSAYQIRYAGYKGVVACWPTKNDGILLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQIVTLLS+L V D +FW MQ+ M++ L+ M  D DVAF V+T SCA
Sbjct: 656  ICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAA+MLS+GFKPQ+EP+LRGML+ IRA+QLGDLR KARIFVPSGRWLMGC DEL  
Sbjct: 716  EAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHG +FSD+K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VP L HLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PM+Y+ A 
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
             K+L R V   DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1368 bits (3540), Expect = 0.0
 Identities = 658/999 (65%), Positives = 798/999 (79%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+G EK++V+TQ+S GGF++ + A+ L+++LE +VG  VWRCR+K SSTPPDSYP + 
Sbjct: 1    MGSEGCEKELVVTQISVGGFDNDVNAKMLSEYLEEQVG-QVWRCRLKISSTPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            + +   V     YEKVVPHAFVHF+S +S    L A G  +L L  KPLIVS+GP+NP+R
Sbjct: 60   IDAEK-VQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYR 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V +++G+ VS+D+ +VGWRGP +GVDF +DPF+ TC+I FTKD A
Sbjct: 119  LNQRRRTTMPFKFSDVSVEMGVLVSKDDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+F+G+ + A+IKC+FK+EFLVR++ ++K+                   +YRTADDDI  
Sbjct: 179  FSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVILFQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQ- 990
            SV FDLLDDDD WIRTTD T  GAIGRC +Y+I++ PRNGP  +KA+ Y   RRVP  + 
Sbjct: 239  SVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFRRVPMVEM 298

Query: 991  -RKERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
              ++ LR++DEP+FG  M DPF+C Q+EG+SF V FL+NAV+HKG+ NQHQ+ +  F LL
Sbjct: 299  CNRKMLRVKDEPDFGVSMSDPFFCFQNEGISFRVLFLVNAVLHKGIVNQHQMANEFFYLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            RS  E VN AAL+H+ SY+ PV DA ++L  +Q+WL+KNPKLL       D+V++RRL+I
Sbjct: 359  RSHQEEVNSAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLDRTGELDDIVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR+YK V+DRFLRVTF DEGM+ LN NVL YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            + + QRT +++RV SIL +GF+LCGR YSFLAFS+NQL+DRSAWFFAED     + V  I
Sbjct: 479  NSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDP---KIRVPGI 535

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
             SWMG+F+NRNVAKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG+I+ 
Sbjct: 536  ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DLA+EVA+KL LS NPP AYQIRYAGCKGVVACWP K DG RL LRPSM KF+SNHT+LE
Sbjct: 596  DLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQIVTLLS+L V D +FW MQ+ M++ L+ M  D DVAF V+T SCA
Sbjct: 656  ICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLDKMLVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAA+MLS+GFKPQ+EP+LRGML+ IRA+QLGDLR KARIFVPSGRWLMGC DEL  
Sbjct: 716  EAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHG +FSD+K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VP L HLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PM+Y+ A 
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
             K+L R V   DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score = 1367 bits (3538), Expect = 0.0
 Identities = 661/998 (66%), Positives = 790/998 (79%), Gaps = 1/998 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  +GSEKD V+TQ+S GGF+ ++ A+ L D LE EVG+ V+RCR+KTS T  +SYP F 
Sbjct: 1    MELEGSEKDTVVTQISIGGFDRHVKAKDLMDFLEYEVGI-VYRCRLKTSCTARESYPTFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
              ++ ++  + +  +V PHAFVHF+S +SVNW L       L L  + L V++GP+  +R
Sbjct: 60   NINSENIMESIDIRQVEPHAFVHFASPESVNWTLS----NPLMLNNQTLKVTLGPETLYR 115

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            M+QRRR+T P KL +V ++IG  V RDE  V WRGP+ GVDF +DPFD  C+  FT+D A
Sbjct: 116  MNQRRRTTTPIKLADVIVEIGNLVRRDEFFVAWRGPSYGVDFLVDPFDGLCKFCFTRDTA 175

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FK   K A++KCDFK+EFLVRD+ ++KQYT                 +YRTADDDI V
Sbjct: 176  FSFKDMAKLAMMKCDFKVEFLVRDINEIKQYTDTSHLVVLLLLASSPRVWYRTADDDIEV 235

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            SVPFDLLDDDDPWIRTTDFT  GAIGRC SY++++PPR+G +L+KA++YL+ERRV     
Sbjct: 236  SVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHGSKLKKAMSYLRERRVQETPL 295

Query: 994  KERLRLRDEPNFGTPMLDP-FYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
            ++ LR++ EP+F  PM DP FY     G+ F + FLLN ++HKG+FNQH ++ GLF L R
Sbjct: 296  RKALRIQSEPDFAVPMSDPIFYVHGKHGIPFEIMFLLNVIVHKGIFNQHNISDGLFDLFR 355

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
            +Q   +N+AAL+HI SY+ PVFDA+ +LK VQEWL++NPKLLK P++  D+ ++RRL+IT
Sbjct: 356  NQPREINLAALKHISSYKRPVFDAYAKLKNVQEWLLRNPKLLKIPRQLDDIAEVRRLVIT 415

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PT+AYCLPPEVELSNRVLR YK+VSDRFLRVTF DEGMQT+N NVL YY APIVK++T +
Sbjct: 416  PTRAYCLPPEVELSNRVLRKYKEVSDRFLRVTFMDEGMQTMNLNVLTYYPAPIVKELTSN 475

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
             + Q+T V++RV S+L +GFYLCG+ YSFLAFSSNQL+DRSAWFFAED     +TV  I+
Sbjct: 476  STSQKTKVFKRVKSLLTDGFYLCGQRYSFLAFSSNQLRDRSAWFFAEDG---KITVNGIK 532

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
             WMG+F NRN+AKC ARMG CFSSTYATVEVP  E N    +IERN YVFSDGIG+ITPD
Sbjct: 533  KWMGRFNNRNIAKCAARMGQCFSSTYATVEVPLTEVNFDLEEIERNTYVFSDGIGMITPD 592

Query: 1891 LAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEI 2070
            LA EVA+KL+L  NPP AYQIRYAGCKGVVACWP K DG RL LR SM KF+S HT+LEI
Sbjct: 593  LAKEVAEKLKLDINPPSAYQIRYAGCKGVVACWPPKGDGIRLSLRRSMNKFDSKHTILEI 652

Query: 2071 CSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAE 2250
            CSWTRFQPGFLNRQIVTLLS L V D++FW+MQETML +LN M TD DVAF+VLT SC E
Sbjct: 653  CSWTRFQPGFLNRQIVTLLSTLNVRDEIFWKMQETMLFKLNQMLTDADVAFNVLTASCPE 712

Query: 2251 QGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVL 2430
            QGN  AIMLS+GFKPQ+EP+L+GMLTCIRAAQL  LREKARIFVP GRWLMGC DEL VL
Sbjct: 713  QGNVGAIMLSAGFKPQSEPHLQGMLTCIRAAQLWGLREKARIFVPLGRWLMGCLDELGVL 772

Query: 2431 EQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDV 2610
            EQGQCFIQVS PSLE CF KHGS+FS+ K  L+V+KG VV+AKNPCLHPGDIR+LEAVDV
Sbjct: 773  EQGQCFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGFVVIAKNPCLHPGDIRILEAVDV 832

Query: 2611 PGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPA 2790
            PGLHHLYDC +FPQKGDRPHANEASGSDLDGDLYFVTWD+NLIPPSK SW PM YD A  
Sbjct: 833  PGLHHLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWNPMQYDPAKP 892

Query: 2791 KELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVD 2970
            + LPRDV   DII+FFSRNMVN+SLGAICNAHVVHAD S YGALD+ CL LAELAA AVD
Sbjct: 893  RTLPRDVTQKDIIDFFSRNMVNESLGAICNAHVVHADLSDYGALDEKCLSLAELAAIAVD 952

Query: 2971 FPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            FPKTG +V+MP  LKPK+YPDFMGK E  SYKS K++G
Sbjct: 953  FPKTGIIVTMPAHLKPKIYPDFMGKEEYQSYKSTKIMG 990


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 1367 bits (3538), Expect = 0.0
 Identities = 657/999 (65%), Positives = 797/999 (79%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEK++V+TQ+S GGF++ + A+ L+++LE +VG  VWRCR+K SSTPPDSYP + 
Sbjct: 1    MGSEGSEKELVVTQISVGGFDNDVNAKMLSEYLEEQVG-QVWRCRLKISSTPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            + +   V     YEKVVPHAFVHF+S +S    L A G  +L L  KPLIVS+GP+NP+R
Sbjct: 60   IDAER-VQRMNNYEKVVPHAFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYR 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QRRR+T P+K  +V +++G+ VS+ + +VGWRGP +GVDF +DPF+ TC+I FTKD  
Sbjct: 119  LNQRRRTTMPFKFSDVSVEMGVLVSKHDFVVGWRGPRTGVDFLVDPFNGTCKILFTKDTV 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+F+G+ + A+IKC+FK+EFLVR++ ++K+                   +YRTADDDI  
Sbjct: 179  FSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVILLQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQ- 990
            SV FDLLDDDD WIRTTD T  GAIGRC +Y+I++ PRNGP  +KA+ Y    RVP  + 
Sbjct: 239  SVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNGPSFEKAMAYFSFHRVPMVEM 298

Query: 991  -RKERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
              ++ LR+RDEP+FG  M DPF+C Q+EG+SF V FL NAV+HKG+ NQHQ+ +  F LL
Sbjct: 299  CNRKMLRVRDEPDFGVSMSDPFFCFQNEGISFKVLFLANAVLHKGIVNQHQMINEFFYLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            RS  E VN+AAL+H+ SY+ PV DA ++L  +Q+WL+KNPKLL+      D+V++RRL+I
Sbjct: 359  RSHQEEVNLAALKHMFSYKWPVNDAIQKLAGIQKWLLKNPKLLERTGELDDIVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR+YK V+DRFLRVTF DEGM+ LN NVL YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGMRNLNRNVLTYYAATIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            + + QRT +++RV SIL +GF+LCGR YSFLAFS+NQL+DRSAWFFAED     + V  I
Sbjct: 479  NSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLRDRSAWFFAEDP---KIRVPGI 535

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
             SWMG+F+NRNVAKC ARMG CFSSTYATVEVPS E N   PDIERN YVFSDGIG+I+ 
Sbjct: 536  ISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELPDIERNGYVFSDGIGMISA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DLA+EVA+KL LS NPP AYQIRYAGCKGVVACWP K DG RL LRPSM KF+SNHT+LE
Sbjct: 596  DLAIEVAEKLHLSVNPPAAYQIRYAGCKGVVACWPTKNDGIRLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQIVTLLS+L V D +FW MQ+ M+  L+ M  D DVAF V+T SCA
Sbjct: 656  ICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMIAGLDKMLVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAA+MLS+GFKPQ+EP+LRGML+ IRA+QLGDLR KARIFVPSGRWLMGC DEL  
Sbjct: 716  EAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKARIFVPSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHGS+FSD+K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VP L HLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+N+IPPSK SW PM+Y+ A 
Sbjct: 836  VPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
             K+L R V   DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA AV
Sbjct: 896  VKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK E  SYKSKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILG 994


>gb|EMJ26639.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score = 1360 bits (3520), Expect = 0.0
 Identities = 661/998 (66%), Positives = 790/998 (79%), Gaps = 1/998 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  +GSE   V+TQ+SFGGF+ +  A+ L  +LE+E+G+ V+RCR+KTS TPP+S+P F 
Sbjct: 1    MEFEGSENGSVVTQVSFGGFQHHARAKDLVTYLEDEIGL-VYRCRLKTSWTPPESFPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            + +T DV    +Y +V PHAFVHF S  SV + ++A GR +L    +PL VS+GP+NP+ 
Sbjct: 60   I-NTADVKRTDDYSRVEPHAFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYF 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            +++RRR+  P+KL +V ++IG  V +DE    WRGP  GVDF +DPFD TC+  FT D A
Sbjct: 119  LNRRRRTKTPFKLSDVHVEIGSLVRQDEFFASWRGPPYGVDFIVDPFDGTCKFCFTMDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FKG  K AVIKCDFK+EFLVR++ ++KQYT                  YRTADDDI  
Sbjct: 179  FSFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVILLRLTSSPWVSYRTADDDIDQ 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            SVPFDLLDDDDPWIRTTDFT  GAIGRC SY++ +PPR+G +L+KA+ YL+ERRV     
Sbjct: 239  SVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHGAKLKKAMNYLRERRVKEVCI 298

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQHE-GLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
            K   +++DEP+FG    +PF+ IQ+E G+SF + FL+NAV+HKG  NQHQL+   F LLR
Sbjct: 299  KWPPKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNAVMHKGTVNQHQLSDSFFHLLR 358

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
            SQ + +NVAAL+H+CSYR PVFDA +RLK VQ+WL+KNPKL+K PKR  D+ ++RRL+IT
Sbjct: 359  SQPKEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNPKLVKDPKRLDDIAEVRRLVIT 418

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PTKAYCLPPEVELSNRVLR YK+V+DRFLRVTF DEGMQ +N+NVLNYY APIVK+IT +
Sbjct: 419  PTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQKINSNVLNYYVAPIVKEITSN 478

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
              +Q+T V++R  +IL +GFYLCGR Y+FLAFSSNQL+DRSAWFFAE     N++V  I 
Sbjct: 479  SFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRDRSAWFFAECV---NISVGKIT 535

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
            SWMGKF N+NVAKC ARMG CFSSTYATVEV S E N + PDI+RN YVFSDGIG+ITPD
Sbjct: 536  SWMGKFNNKNVAKCAARMGQCFSSTYATVEVTSSEVNDI-PDIKRNGYVFSDGIGMITPD 594

Query: 1891 LAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEI 2070
            LA+EVA+KL+L  NPPCAYQIR+AGCKGVVACWP K DG RL LR SM KFES HT LEI
Sbjct: 595  LALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRLSLRTSMNKFESKHTTLEI 654

Query: 2071 CSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAE 2250
            CSWTR+QPGFLNRQI+TLLS L V D++FWRMQE M+ +LN M  D DVAF VLT SCAE
Sbjct: 655  CSWTRYQPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQMLVDTDVAFDVLTASCAE 714

Query: 2251 QGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVL 2430
            QGN AAIMLS+GFKPQTEP+LRGMLTCI+AAQL  LREKARIFV SGRWLMG  DEL VL
Sbjct: 715  QGNAAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARIFVHSGRWLMGVLDELGVL 774

Query: 2431 EQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDV 2610
            EQGQCF+QVS P LE CF KHGS F+ ++R LQV+KG VV+AKNPCLHPGDIR+LEAVD 
Sbjct: 775  EQGQCFVQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIAKNPCLHPGDIRILEAVDA 834

Query: 2611 PGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPA 2790
            PGLHHLYDC +FPQKGDRPH +EASGSDLDGDLYFVTWD+NLIPPSK SW PM YD A A
Sbjct: 835  PGLHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENLIPPSKKSWMPMQYDPAEA 894

Query: 2791 KELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVD 2970
            K   R V   DII+FF +NM N++LG ICNAHVVHAD S YGALD  CLKLAELAA AVD
Sbjct: 895  KLQGRPVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYGALDVNCLKLAELAALAVD 954

Query: 2971 FPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            FPKTGK+VS+PQ LKP+LYPDF+GK ++ SYKS K+LG
Sbjct: 955  FPKTGKIVSLPQHLKPRLYPDFLGKEDNQSYKSTKILG 992


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score = 1359 bits (3518), Expect = 0.0
 Identities = 661/1000 (66%), Positives = 796/1000 (79%), Gaps = 3/1000 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+GSEKD+V+TQ+S GGF + + A+ L++ LE++VG  VWRCR+KTSSTPPDSYP + 
Sbjct: 1    MGSEGSEKDLVVTQISVGGFSNDVNAKMLSECLEDQVG-QVWRCRLKTSSTPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +   N V     Y KV PHAFVHF+S +S    L A  R +L L  KPL VS+GP+NPF 
Sbjct: 60   IDVEN-VRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFN 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            M++RRR+  P+K  +VG++IG+ VS D+ +VGWRGP SGV+F +DPF+ TC+I FT+D A
Sbjct: 119  MNKRRRTIMPFKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGTCKILFTRDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F FKG+ K AVIKC+FK+EFL+R++ ++ +                   +YRTADDDI  
Sbjct: 179  FCFKGEGKHAVIKCNFKIEFLLREINEINECKDFASLVLLLQLTSSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            SV FDLLDDDD WIRTTD TC GAIGR  +Y+I++ PRNGP L+KA+ Y +E RVP  ++
Sbjct: 239  SVAFDLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNGPSLKKAMNYFRESRVPVVEQ 298

Query: 994  KER--LRLRDEPNFGTPMLDPFYCIQ-HEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGL 1164
              R  LR+RDEP+FG  + +PF+C Q HEG+SF V FL+NAV+ KG+ NQHQ+T+  F L
Sbjct: 299  GNRQMLRVRDEPDFGVSLSEPFFCFQNHEGISFKVLFLVNAVLQKGIVNQHQMTAEFFSL 358

Query: 1165 LRSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLI 1344
            LR   EGVN+AAL+HI SY+ PV DA ++L +VQ+WL KNP LL+   +  DVV++RRL+
Sbjct: 359  LRKHQEGVNLAALKHIFSYKRPVNDAIQKLASVQKWLFKNPNLLERTGQLDDVVEVRRLV 418

Query: 1345 ITPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDIT 1524
            ITPTKAYCLPP VELSNRVLR YK VSDRFLRVTF DEGM+ LN NVL YYAA IV++IT
Sbjct: 419  ITPTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGMRNLNRNVLTYYAATIVREIT 478

Query: 1525 KSFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFN 1704
             S + QRT +++RV SIL +GFYLCGR YSFLAFS+NQL+DRSAWFFAE      + V N
Sbjct: 479  SSSNPQRTGIFQRVKSILSKGFYLCGRRYSFLAFSANQLRDRSAWFFAEAP---EIRVPN 535

Query: 1705 IRSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIIT 1884
            I +WMGKF NRNVAKC ARMG CFSSTYATVEV   E N   PDIERN YVFSDGIG+++
Sbjct: 536  IINWMGKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMS 595

Query: 1885 PDLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTML 2064
             DL++EVA KLQLS NPPCAYQIRYAGCKGVVACWP ++DG RL LRPSM KF+SNHT+L
Sbjct: 596  ADLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTIL 655

Query: 2065 EICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESC 2244
            EICSWTR QPGFLNRQI+TLLS+L+V D++FW MQ+ ML++L+ +  D DVAF V+T SC
Sbjct: 656  EICSWTRLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASC 715

Query: 2245 AEQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELA 2424
            AE GNTAAIMLS+GFKPQ+EP+LRGML  IRAAQLGDLR K R+FVPSGRWLMGC DEL 
Sbjct: 716  AEAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVPSGRWLMGCLDELR 775

Query: 2425 VLEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAV 2604
             LEQGQCFIQVS PSLE CF KHG +FS++K+ LQV+KGLVV+AKNPCLHPGD+R+LEAV
Sbjct: 776  KLEQGQCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAV 835

Query: 2605 DVPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSA 2784
            DVPGLHHLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PMDY  A
Sbjct: 836  DVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPA 895

Query: 2785 PAKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATA 2964
             AK+L R V+  DII+FFS+NMV +SLG ICNAHVVHAD S +GALD+ CLKLAELAA A
Sbjct: 896  EAKQLGRQVQHTDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALA 955

Query: 2965 VDFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            VDFPKTGKLV+MP DLKPK+YPDFMGK    +Y+SKK+LG
Sbjct: 956  VDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQTYESKKILG 995


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score = 1359 bits (3517), Expect = 0.0
 Identities = 663/1007 (65%), Positives = 794/1007 (78%), Gaps = 2/1007 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  +G EK +V  Q+SFGGF+  + A  L  +LENEVG  VWRCR+KTS TP +SYP+F+
Sbjct: 1    MEPEGREKLLVDAQVSFGGFDRNVKAAELVKYLENEVG-GVWRCRLKTSCTPSESYPDFS 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            V +T +V    +YEKV PHAFVHF+    V   ++A GR +L L G+ L VS+GP+NPFR
Sbjct: 60   VTNTAEVRKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFR 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QR R++ P+KL +V ++IG  VSRDE  V WRGP SG DF +DPFD TC+  FT+D+A
Sbjct: 120  LNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            FA K   + AVIKC+FK+EFLVR++  VKQY+                 +YRTADDDI V
Sbjct: 180  FALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILV 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
             VPFD+LDDDDPWIRTTDFT  GAIGRC SY+I++  R+  +L K +TYL ERRV  +  
Sbjct: 240  LVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSL 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQHE-GLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
               + +R+EP+F  PM DPF+CI +E G+SF + FL+NAV+HKG+ NQHQL+   F LLR
Sbjct: 300  SRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLR 359

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
             QS  VNVAAL+HI SY+ PVFDA KRLK VQEWL+K+P+L K PK+  D+V++RRL+IT
Sbjct: 360  GQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVIT 419

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PTKAYCLPPEVELSNRVLR YKD++DRFLRVTF DEG+QT+N NVL+Y+ APIV+DIT +
Sbjct: 420  PTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDITLN 479

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
               Q+T V++RV SIL  GFYLCGR +SFLAFSS+QL+D SAWFF+ED      +V +I+
Sbjct: 480  SFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDG---KTSVLDIK 536

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
             WMG+FT++N+AKC ARMG CFSSTYATVEVP  E +   PDI+RN YVFSDGIG ITPD
Sbjct: 537  KWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPD 596

Query: 1891 LAMEVAQKLQLSDNPP-CAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            LAMEVAQKL+L  NPP CAYQIRYAGCKGVVACWP K DG R+ LR SM KF+S+HT LE
Sbjct: 597  LAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLE 656

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQI+TLLS L VPD++FW MQ++ML++LN M  D DVAF VLT +CA
Sbjct: 657  ICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACA 716

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            EQGNTAAIMLS+GF PQTEP+LRGMLTCIRAAQL  LREKARIFVP+GRWLMGC DEL V
Sbjct: 717  EQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGV 776

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LE GQCFIQVS P L  CF KHGS+F++ K+ LQV+KG VV+AKNPCLHPGDIR+LEAVD
Sbjct: 777  LEGGQCFIQVSEPFLGNCFSKHGSRFAETKK-LQVIKGFVVIAKNPCLHPGDIRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
             P LHHLYDC +FPQKGDRPH NEASGSDLDGDLYFVTWD+NLIPPSK SWPPM+Y++A 
Sbjct: 836  HPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
            AK L R V   DIIEFF+++MVN++LG ICNAHVVHAD S YGALD+ C+ LAELAATAV
Sbjct: 896  AKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLGVPVESSQD 3108
            DFPKTGK+V+MP  LKPKLYPDFMGK    SYKS K+LG     S+D
Sbjct: 956  DFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKD 1002


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score = 1359 bits (3517), Expect = 0.0
 Identities = 663/1007 (65%), Positives = 794/1007 (78%), Gaps = 2/1007 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  +G EK +V  Q+SFGGF+  + A  L  +LENEVG  VWRCR+KTS TP +SYP+F+
Sbjct: 1    MEPEGREKLLVDAQVSFGGFDRNVKAAELVKYLENEVG-GVWRCRLKTSCTPSESYPDFS 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            V +T +V    +YEKV PHAFVHF+    V   ++A GR +L L G+ L VS+GP+NPFR
Sbjct: 60   VTNTAEVRKTDDYEKVEPHAFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFR 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            ++QR R++ P+KL +V ++IG  VSRDE  V WRGP SG DF +DPFD TC+  FT+D+A
Sbjct: 120  LNQRGRTSTPFKLPDVCVEIGTLVSRDEFFVAWRGPASGTDFLVDPFDGTCKFCFTRDIA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            FA K   + AVIKC+FK+EFLVR++  VKQY+                 +YRTADDDI V
Sbjct: 180  FALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAILLQLASSPRVWYRTADDDILV 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
             VPFD+LDDDDPWIRTTDFT  GAIGRC SY+I++  R+  +L K +TYL ERRV  +  
Sbjct: 240  LVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHRGKLSKVITYLGERRVQVDSL 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQHE-GLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
               + +R+EP+F  PM DPF+CI +E G+SF + FL+NAV+HKG+ NQHQL+   F LLR
Sbjct: 300  SRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAVMHKGIINQHQLSDSFFDLLR 359

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
             QS  VNVAAL+HI SY+ PVFDA KRLK VQEWL+K+P+L K PK+  D+V++RRL+IT
Sbjct: 360  GQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDIVEVRRLVIT 419

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PTKAYCLPPEVELSNRVLR YKD++DRFLRVTF DEG+QT+N NVL+Y+ APIV+DIT +
Sbjct: 420  PTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIAPIVRDITLN 479

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
               Q+T V++RV SIL  GFYLCGR +SFLAFSS+QL+D SAWFF+ED      +V +I+
Sbjct: 480  SFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDG---KTSVLDIK 536

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
             WMG+FT++N+AKC ARMG CFSSTYATVEVP  E +   PDI+RN YVFSDGIG ITPD
Sbjct: 537  KWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGIGKITPD 596

Query: 1891 LAMEVAQKLQLSDNPP-CAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            LAMEVAQKL+L  NPP CAYQIRYAGCKGVVACWP K DG R+ LR SM KF+S+HT LE
Sbjct: 597  LAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQSHHTTLE 656

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTRFQPGFLNRQI+TLLS L VPD++FW MQ++ML++LN M  D DVAF VLT +CA
Sbjct: 657  ICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEVLTAACA 716

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            EQGNTAAIMLS+GF PQTEP+LRGMLTCIRAAQL  LREKARIFVP+GRWLMGC DEL V
Sbjct: 717  EQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGCLDELGV 776

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LE GQCFIQVS P L  CF KHGS+F++ K+ LQV+KG VV+AKNPCLHPGDIR+LEAVD
Sbjct: 777  LEGGQCFIQVSEPFLGNCFSKHGSRFAETKK-LQVIKGFVVIAKNPCLHPGDIRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
             P LHHLYDC +FPQKGDRPH NEASGSDLDGDLYFVTWD+NLIPPSK SWPPM+Y++A 
Sbjct: 836  HPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPMEYNAAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
            AK L R V   DIIEFF+++MVN++LG ICNAHVVHAD S YGALD+ C+ LAELAATAV
Sbjct: 896  AKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAELAATAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLGVPVESSQD 3108
            DFPKTGK+V+MP  LKPKLYPDFMGK    SYKS K+LG     S+D
Sbjct: 956  DFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNKILGRLYRQSKD 1002


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score = 1353 bits (3501), Expect = 0.0
 Identities = 656/998 (65%), Positives = 779/998 (78%), Gaps = 1/998 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  +  E D V+TQ+SFGGF S++TA+ L  +LE+E+G+ V+RCR+KTS TPP+S P F 
Sbjct: 1    MELEERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGL-VFRCRLKTSWTPPESVPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +    D+    +Y KV PHAFVHF+S +SV  V++A GR  L    + L  S+GP+N F 
Sbjct: 60   ISDAADIETTDDYRKVEPHAFVHFASPESVTAVMDAVGRCQLFFNNQALKASLGPENLFN 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            M++RRR+  P+KL +V ++IG  V  DE  V W+GP  GVDF +DPFD TC+  F +D A
Sbjct: 120  MNKRRRTKIPFKLADVRLEIGSLVRLDEFFVAWKGPDHGVDFVVDPFDGTCKFCFRRDTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FKG NK AVI CDFK EF VR++ + K YT                  YRTADDDI  
Sbjct: 180  FSFKGLNKHAVITCDFKAEFQVREIGEFKHYTEPLYHVLLLRLVSSPWVSYRTADDDIDQ 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            SV FDLLDDDDPWIRTTDFT  GAIGRC  Y++ +PPR+G +L+KA+ YLKERRV     
Sbjct: 240  SVLFDLLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHGAKLKKAMIYLKERRVQELFI 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQHE-GLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLR 1170
            K+  R++DEP FG PM D  + I ++  +SF + FL+NAV+HKG+ NQHQL+   F LLR
Sbjct: 300  KKPPRIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAVMHKGILNQHQLSESFFDLLR 359

Query: 1171 SQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIIT 1350
            +Q E +NVAAL+H+CSY+HPVFDA KRLK VQEWL++NPKL+K PKR  D+ ++RRL+IT
Sbjct: 360  NQPEEINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDIAEVRRLVIT 419

Query: 1351 PTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKS 1530
            PTKAYCLPPEVELSNRVLR YK+V+DRFLRVTF DEGMQT+N+NV+N Y APIVK+IT++
Sbjct: 420  PTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVAPIVKEITEN 479

Query: 1531 FSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIR 1710
               Q+T VY R+ +IL  GF+LCGR YSFLAFSSNQL+DRSAWFFAEDK    +++  I+
Sbjct: 480  TFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDK---TISIQGIK 536

Query: 1711 SWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPD 1890
            +WMG+FTNRNVAKC ARMG CFSSTYATVEVPS + N   PDIERN YVFSDGIG ITPD
Sbjct: 537  NWMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGIGRITPD 596

Query: 1891 LAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEI 2070
            LAMEVA+KL+L  +PP AYQIRY GCKGVVACWP   DG RL LR SM KF S+HT LEI
Sbjct: 597  LAMEVAEKLKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFASDHTTLEI 656

Query: 2071 CSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAE 2250
            CSWTR QPGFLNRQI+TLLSAL VPD++FW MQETM+++L  M  D DVAF VLT SCAE
Sbjct: 657  CSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDVLTASCAE 716

Query: 2251 QGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVL 2430
            QGN+AAIMLS+GFKPQTEP+LRGMLTCI+AAQL  LREK RIFVPSGRWLMGC DEL VL
Sbjct: 717  QGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGCLDELGVL 776

Query: 2431 EQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDV 2610
            EQGQCF+QVS PSLE CF KHGS+F    + LQV+KG VVVAKNPCLHPGDIR+LEAVD 
Sbjct: 777  EQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDA 836

Query: 2611 PGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPA 2790
            PGLHHL+DC +FPQKG RPH +EASGSDLDGDLYFVTWD+NLIPP K SW PM+Y+ A A
Sbjct: 837  PGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPAEA 896

Query: 2791 KELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVD 2970
            K   R V   D+IEFF RNMVN++LGAICNAHVVH+D S YGA D+ CLKLAELAA AVD
Sbjct: 897  KLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVAVD 956

Query: 2971 FPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            FPKTGK+V+MP  LKPKLYPDFMGK +  SYKS K+LG
Sbjct: 957  FPKTGKIVTMPPHLKPKLYPDFMGKQDYQSYKSNKILG 994


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score = 1347 bits (3486), Expect = 0.0
 Identities = 649/997 (65%), Positives = 784/997 (78%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  +GS K+ V+TQ+S GGF+ ++ AR L  +LENEVG+ VWRCR+KTS TPP+SYP F 
Sbjct: 1    MELEGSVKETVVTQVSVGGFDRHVKARDLMKYLENEVGL-VWRCRLKTSWTPPESYPNFE 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +  T  +     Y+KV PHAFVHF+S ++V W ++A GR +L    + L VS+GP+NP+ 
Sbjct: 60   ITDTTVIQRKDNYKKVEPHAFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYY 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            +++RRR T P+KL +V ++IG   S DE +VGWRGP SGV+F +DPFD TC+  F++D A
Sbjct: 120  LNRRRRDTTPFKLPDVSLEIGTLASCDEFIVGWRGPPSGVEFLVDPFDCTCKFCFSRDTA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F+FKG N+ AVIKCDFK+EFLVR++ +VKQY+                 +YRTADDD   
Sbjct: 180  FSFKGTNEHAVIKCDFKVEFLVREINEVKQYSEPTGFVVLLQLASSPWVWYRTADDDFEK 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
            +VPF LLDDDD WIRTTDFT  GAIGRC +Y++ + PR+G +L+KA+ YL+ERRVP E  
Sbjct: 240  TVPFGLLDDDDQWIRTTDFTASGAIGRCNTYRVLVRPRHGLKLKKAMDYLRERRVPVEDL 299

Query: 994  KERLRLRDEPNFGTPMLDPFYCIQHEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLLRS 1173
            + +LR+RDEP+FG  M D FY I  EG+ F + FL+NAV+HKG+FNQHQL+   F LLR+
Sbjct: 300  RSQLRIRDEPDFGRSMSDHFYYIYKEGIPFEIMFLVNAVLHKGIFNQHQLSMDFFRLLRN 359

Query: 1174 QSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLIITP 1353
            QS  VNVAAL+HI SYRHPV+DA++RLK V +WL+KNPKL K+P +  D+V+IRRL+ITP
Sbjct: 360  QSMEVNVAALKHIYSYRHPVYDAYERLKDVHDWLLKNPKLFKSPPQLDDIVEIRRLVITP 419

Query: 1354 TKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITKSF 1533
            TKAYCL PEVELSNRVLR YKDV+DRFLRVTF DEGMQ +N NVL YY A IV+D+T + 
Sbjct: 420  TKAYCLLPEVELSNRVLRKYKDVADRFLRVTFMDEGMQIMNANVLTYYNAAIVRDVTSTS 479

Query: 1534 SVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNIRS 1713
              Q+T V++RV SIL +GFYLCGR YSFLAFS+NQL+DR+AWFFAED     + V  I  
Sbjct: 480  FSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDRAAWFFAEDG---KINVLQIIG 536

Query: 1714 WMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITPDL 1893
            WMGKFTNRN+AKC ARMG CFSSTYATVEVPS + N   PDI+RN Y FSDGIG ITPDL
Sbjct: 537  WMGKFTNRNIAKCAARMGQCFSSTYATVEVPSGQVNMHLPDIKRNGYDFSDGIGKITPDL 596

Query: 1894 AMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLEIC 2073
            AMEVAQKL+L  NPPCAYQIRYAGCKGVVACWP + D  RL LR SM KF S+HT LEIC
Sbjct: 597  AMEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEEGDRIRLSLRSSMIKFFSHHTTLEIC 656

Query: 2074 SWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCAEQ 2253
            SWTRFQPGFLNRQI+TLLS L VPD+VFW MQ +M+++L+ +  D D AF V+  SC EQ
Sbjct: 657  SWTRFQPGFLNRQIITLLSTLGVPDEVFWGMQNSMVSKLDKVLVDTDAAFEVVISSCGEQ 716

Query: 2254 GNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAVLE 2433
            G+T AIMLS+GFKPQTEP+LRGMLTC+RA+QL  LREK+RIF+ SGRWLMG  DEL VLE
Sbjct: 717  GHTPAIMLSAGFKPQTEPHLRGMLTCVRASQLWGLREKSRIFIHSGRWLMGVLDELGVLE 776

Query: 2434 QGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVDVP 2613
            QGQCFIQVS PSL+ CF KHGS+F++ K+  +V+KGLVV+AKNPCLHPGDIR+LEAVD P
Sbjct: 777  QGQCFIQVSNPSLQNCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDIRILEAVDAP 836

Query: 2614 GLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAPAK 2793
            GLHHLYDC +FPQKG+RPH NEASGSDLDGDLYFVTW++ LIPPSK S  PM YD    +
Sbjct: 837  GLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEEALIPPSKKSSQPMQYDLDAPR 896

Query: 2794 ELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAVDF 2973
            EL R V   DIIEFFS+NMVN+ LG+ICNAHVVH+D S +GA D+ C+ LAELAA AVDF
Sbjct: 897  ELNRSVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAELAAIAVDF 956

Query: 2974 PKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            PKTGK+VSMP  LKPKLYPDFMGK E  SYKS K+LG
Sbjct: 957  PKTGKIVSMPAQLKPKLYPDFMGKEEFQSYKSNKILG 993


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score = 1330 bits (3443), Expect = 0.0
 Identities = 646/999 (64%), Positives = 784/999 (78%), Gaps = 2/999 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M S+ S+ ++V+TQ+S GGF + + A+ L+++LE +VG  VWRCR+KTSSTPPDSYP + 
Sbjct: 1    MGSEDSDMNIVVTQISVGGFSNDVNAKMLSEYLEEQVG-QVWRCRLKTSSTPPDSYPTYD 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +     V     Y KV PHAFVHF+S +S    L A  R +L L  KPL VS+GP+N F 
Sbjct: 60   ID-VEKVRRMNNYIKVEPHAFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENTFN 118

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            M++RRR+  PYK  +VG++IG+ VS D+ +VGWRGP SGV+F +DPF+  C+I FT+D A
Sbjct: 119  MNERRRTFMPYKFSDVGVEIGVLVSNDDFVVGWRGPHSGVNFLVDPFNGKCKILFTRDTA 178

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F FKG+ K AVIKC+FK+EFL+R++ ++ +                   +YRTADDDI  
Sbjct: 179  FCFKGEGKHAVIKCNFKIEFLLREINEINECKDFSSLVLLLQLASSPLVFYRTADDDIEE 238

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPF-EQ 990
            SV FDLLDDDD WIRTTD T  GAIGR  +Y++++ PRNGP  +KA+ Y +E RVP  EQ
Sbjct: 239  SVAFDLLDDDDQWIRTTDITFSGAIGRFNTYRVSIRPRNGPSFKKAMNYFRESRVPVVEQ 298

Query: 991  RKERLRLRDEPNFGTPMLDPFYCIQ-HEGLSFSVTFLLNAVIHKGVFNQHQLTSGLFGLL 1167
             ++ LR+R+EP+FG  + +PF+C Q HEG+SF V FL+NAV+HKG+ NQHQ+T+  F LL
Sbjct: 299  GEQMLRVRNEPDFGESVSEPFFCFQNHEGISFKVLFLVNAVLHKGIVNQHQMTAEFFSLL 358

Query: 1168 RSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLII 1347
            R   EGVN+AAL+HI SY+ PV DA ++L +VQ+WL  NP LL+   +  DVV++RRL+I
Sbjct: 359  RKHQEGVNLAALKHIFSYKRPVNDAIRKLASVQKWLFNNPNLLERTGQLDDVVEVRRLVI 418

Query: 1348 TPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDITK 1527
            TPTKAYCLPP VELSNRVLR YK +SDRFLRVTF DEGM+ LN N L YYAA IV++IT 
Sbjct: 419  TPTKAYCLPPTVELSNRVLRKYKHISDRFLRVTFMDEGMRNLNRNALTYYAANIVREITS 478

Query: 1528 SFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFNI 1707
            S + QRT +++RV  I+ +GFYLCGR YSFLAFS+NQL+DRSAWFFAE    R  ++ N 
Sbjct: 479  SSNPQRTGIFQRVKIIVNKGFYLCGRRYSFLAFSANQLRDRSAWFFAETPEIRVTSIIN- 537

Query: 1708 RSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIITP 1887
              WMGKF NRNVAKC ARMG CFSSTYATVEV   E N   PDIERN YVFSDGIG++T 
Sbjct: 538  --WMGKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELPDIERNGYVFSDGIGMMTA 595

Query: 1888 DLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTMLE 2067
            DL++EVA KLQLS NPPCAYQIRYAGCKGVVACWP ++DG RL LRPSM KF+SNHT+LE
Sbjct: 596  DLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIRLSLRPSMKKFDSNHTILE 655

Query: 2068 ICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESCA 2247
            ICSWTR QPGFLNRQI+TLLS+L+V D++FW MQ+ ML++L+ +  D DVAF V+T SCA
Sbjct: 656  ICSWTRLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLDKILVDSDVAFDVITASCA 715

Query: 2248 EQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELAV 2427
            E GNTAAIMLS+GFKPQ+EP+LRGML  IRAAQLGDLR K R+FV SGRWLMGC DEL  
Sbjct: 716  EAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTRMFVTSGRWLMGCLDELGE 775

Query: 2428 LEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAVD 2607
            LEQGQCFIQVS PSLE CF KHG +FS++K+ LQVVKGLVV+AKNPCLHPGD+R+LEAVD
Sbjct: 776  LEQGQCFIQVSSPSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVD 835

Query: 2608 VPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSAP 2787
            VPGLHHLYDC +FPQKGDRPH+NEASGSDLDGDLYFVTWD+NLIPPSK SW PM Y  A 
Sbjct: 836  VPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAE 895

Query: 2788 AKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATAV 2967
            AK+L R V+  DII+FF +NMV +SLG ICNAHVVHAD S +GA+D+ CLKLAELAA AV
Sbjct: 896  AKQLGRQVQHTDIIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAV 955

Query: 2968 DFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            DFPKTGKLV+MP DLKPK+YPDFMGK    SY+SKK+LG
Sbjct: 956  DFPKTGKLVTMPFDLKPKMYPDFMGKEPFQSYESKKILG 994


>gb|ESW09024.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score = 1329 bits (3439), Expect = 0.0
 Identities = 650/1000 (65%), Positives = 784/1000 (78%), Gaps = 3/1000 (0%)
 Frame = +1

Query: 94   MASDGSEKDMVITQLSFGGFESYITARTLADHLENEVGVSVWRCRMKTSSTPPDSYPEFT 273
            M  + SEKD V+TQ+S GGF S + A  L ++LE+++G+ V+RCR+KTS TPP+SYPEF 
Sbjct: 1    MDLEASEKDSVVTQISIGGFGSEVKASELVNYLEDKIGL-VYRCRLKTSWTPPESYPEFN 59

Query: 274  VQSTNDVHNNTEYEKVVPHAFVHFSSQKSVNWVLEADGRGDLNLAGKPLIVSMGPKNPFR 453
            +  T  +    +Y+KV PHAFVHF+S +SV   L A GR DL L  +PL VS GP+NP+ 
Sbjct: 60   ITDTAKIKGTDDYKKVEPHAFVHFASPESVTAALNASGRCDLFLKNEPLKVSCGPENPYF 119

Query: 454  MDQRRRSTDPYKLYNVGIDIGISVSRDELLVGWRGPTSGVDFFIDPFDSTCRIRFTKDVA 633
            +++RRR+T P+K+ +V ++IG  VS  E  V W+GP  GV F +DPFD  CR  FT+D+A
Sbjct: 120  LNKRRRTTIPFKMSDVIVEIGTLVSPGEFFVAWKGPDKGVKFLVDPFDGMCRFCFTRDIA 179

Query: 634  FAFKGQNKRAVIKCDFKLEFLVRDLRDVKQYTXXXXXXXXXXXXXXXXXYYRTADDDIYV 813
            F FKG  K AVIKCDF++ FLVRD+ ++++Y                  +YRTA+DDI  
Sbjct: 180  FPFKGIEKEAVIKCDFQVGFLVRDINEIRRYNDSSYLVVLLHLASSPWVWYRTAEDDIED 239

Query: 814  SVPFDLLDDDDPWIRTTDFTCCGAIGRCRSYKITMPPRNGPRLQKAVTYLKERRVPFEQR 993
             VPFDLLDDDDPWIRTTDFT  GAIGRC  YKI++PPR+G +L KA+ YLK +RV  ++ 
Sbjct: 240  LVPFDLLDDDDPWIRTTDFTPSGAIGRCNFYKISIPPRHGAKLMKAMLYLKGQRVQMQEL 299

Query: 994  --KERLRLRDEPNFGTPMLDPFYCIQHE-GLSFSVTFLLNAVIHKGVFNQHQLTSGLFGL 1164
              K+ LR  +EP+FGTPM +PF+ I ++ G++F + FL+NA++HKG+FNQH+L+   F L
Sbjct: 300  PLKQTLRALNEPDFGTPMSNPFFYIDYQVGITFDIMFLVNAIVHKGIFNQHRLSDRFFEL 359

Query: 1165 LRSQSEGVNVAALEHICSYRHPVFDAHKRLKAVQEWLMKNPKLLKAPKRTGDVVQIRRLI 1344
            LR+Q + +NVAAL+H+CSY+ PVFDA KRLK VQEWL++NPKL +  K+  D+V++RRL+
Sbjct: 360  LRNQPKELNVAALKHLCSYKRPVFDATKRLKVVQEWLLRNPKLYQISKQLDDIVEVRRLV 419

Query: 1345 ITPTKAYCLPPEVELSNRVLRHYKDVSDRFLRVTFTDEGMQTLNNNVLNYYAAPIVKDIT 1524
            ITP+KAYC+PPEVELSNRVLR +++VSD FLRVTF DEGMQT+N N LNYY APIVK+IT
Sbjct: 420  ITPSKAYCIPPEVELSNRVLRKFREVSDCFLRVTFMDEGMQTINVNALNYYVAPIVKEIT 479

Query: 1525 KSFSVQRTTVYRRVNSILKEGFYLCGRLYSFLAFSSNQLKDRSAWFFAEDKGNRNLTVFN 1704
             +   Q+T +Y+RV +IL+EGFY CGR YSFLAFSSNQL+DRSAWFFAE+K    +    
Sbjct: 480  SNTFSQKTKIYKRVKTILEEGFYFCGRKYSFLAFSSNQLRDRSAWFFAEEK----MKCDE 535

Query: 1705 IRSWMGKFTNRNVAKCTARMGLCFSSTYATVEVPSIEANKLFPDIERNNYVFSDGIGIIT 1884
            IRSWMGKF  +NVAKC ARMG CFSSTYATVEV + E N + PD+ERNNYVFSDGIGIIT
Sbjct: 536  IRSWMGKFNQKNVAKCAARMGQCFSSTYATVEVVANEVNSMLPDVERNNYVFSDGIGIIT 595

Query: 1885 PDLAMEVAQKLQLSDNPPCAYQIRYAGCKGVVACWPWKEDGKRLFLRPSMGKFESNHTML 2064
            PDLA EVA+KL+L DN P AYQIRYAG KGVVA WP K DG RL LRPSM KF+S HT+L
Sbjct: 596  PDLAREVAEKLKL-DNVPSAYQIRYAGFKGVVASWPAKGDGIRLSLRPSMNKFQSTHTIL 654

Query: 2065 EICSWTRFQPGFLNRQIVTLLSALQVPDDVFWRMQETMLTRLNTMFTDVDVAFSVLTESC 2244
            EIC+WTRFQPGFLNRQI+TLLSAL VPD++FW+MQE ML +LN M  D D+AF VLT+SC
Sbjct: 655  EICAWTRFQPGFLNRQIITLLSALGVPDEIFWKMQEAMLWKLNQMLVDADIAFDVLTKSC 714

Query: 2245 AEQGNTAAIMLSSGFKPQTEPYLRGMLTCIRAAQLGDLREKARIFVPSGRWLMGCFDELA 2424
            AE GN AAIMLS GF P TEP+LRGMLT  RAAQL  LREK+RIFV SGRWLMG  DE  
Sbjct: 715  AEHGNAAAIMLSCGFSPLTEPHLRGMLTSTRAAQLWGLREKSRIFVSSGRWLMGVLDESG 774

Query: 2425 VLEQGQCFIQVSMPSLEKCFCKHGSQFSDLKRELQVVKGLVVVAKNPCLHPGDIRVLEAV 2604
            VLEQGQCF+QVS PSLE CF KHGS+FS+ K  LQVVKG VV+AKNPCLHPGD+RVLEAV
Sbjct: 775  VLEQGQCFVQVSTPSLENCFSKHGSRFSETKN-LQVVKGFVVIAKNPCLHPGDVRVLEAV 833

Query: 2605 DVPGLHHLYDCFIFPQKGDRPHANEASGSDLDGDLYFVTWDKNLIPPSKTSWPPMDYDSA 2784
            D P LHHLYDC +FPQKGDRPH NEASGSDLDGDLYFVTWD++LIPPSK SW PM+Y + 
Sbjct: 834  DAPDLHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKRSWIPMEYAAQ 893

Query: 2785 PAKELPRDVKLADIIEFFSRNMVNDSLGAICNAHVVHADSSPYGALDDPCLKLAELAATA 2964
             +K   R V   DII+FF RNMVN+ LGAICNAHVVHADSS Y ALD+ C+ LAELAATA
Sbjct: 894  ESKLQTRQVTTRDIIDFFVRNMVNEHLGAICNAHVVHADSSDYDALDEKCIHLAELAATA 953

Query: 2965 VDFPKTGKLVSMPQDLKPKLYPDFMGKAESHSYKSKKVLG 3084
            VDFPKTGKLV+MP  LKPKLYPDFMGK +  SY+SKKVLG
Sbjct: 954  VDFPKTGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLG 993