BLASTX nr result
ID: Rheum21_contig00009210
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009210
(527 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006307065.1| hypothetical protein CARUB_v10008652mg [Caps... 56 1e-16
ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1... 59 1e-16
emb|CBI23759.3| unnamed protein product [Vitis vinifera] 59 1e-16
gb|EXB87375.1| Serine hydroxymethyltransferase 1 [Morus notabilis] 59 2e-16
ref|NP_564473.1| putative serine hydroxymethyltransferase [Arabi... 55 3e-16
ref|XP_002893915.1| hypothetical protein ARALYDRAFT_891266 [Arab... 55 3e-16
gb|AAG52195.1|AC021199_1 putative hydroxymethyltransferase; 4959... 55 3e-16
gb|AAM61506.1| putative hydroxymethyltransferase [Arabidopsis th... 55 3e-16
ref|XP_002529531.1| serine hydroxymethyltransferase, putative [R... 55 8e-16
ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1... 58 8e-16
emb|CBI19093.3| unnamed protein product [Vitis vinifera] 58 8e-16
ref|XP_006396020.1| hypothetical protein EUTSA_v10003888mg [Eutr... 55 1e-15
ref|XP_006349365.1| PREDICTED: serine hydroxymethyltransferase 7... 56 1e-15
ref|XP_003564749.1| PREDICTED: serine hydroxymethyltransferase 1... 56 2e-15
gb|EOX98086.1| Serine hydroxymethyltransferase 6 isoform 1 [Theo... 54 2e-15
ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group] g... 55 3e-15
ref|XP_004230481.1| PREDICTED: serine hydroxymethyltransferase 2... 56 3e-15
ref|XP_006646525.1| PREDICTED: serine hydroxymethyltransferase 7... 55 5e-15
ref|NP_001055615.1| Os05g0429000 [Oryza sativa Japonica Group] g... 55 7e-15
ref|XP_006369360.1| hypothetical protein POPTR_0001s21950g [Popu... 54 7e-15
>ref|XP_006307065.1| hypothetical protein CARUB_v10008652mg [Capsella rubella]
gi|482575776|gb|EOA39963.1| hypothetical protein
CARUB_v10008652mg [Capsella rubella]
Length = 594
Score = 56.2 bits (134), Expect(2) = 1e-16
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFETIADFL
Sbjct: 514 GVRIGTPAMTTRGCIESDFETIADFL 539
Score = 55.5 bits (132), Expect(2) = 1e-16
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK ++GDNGTIS GG
Sbjct: 484 GKVYEKVCEMCHITLNKTAIFGDNGTISPGG 514
>ref|XP_002266312.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 577
Score = 58.9 bits (141), Expect(2) = 1e-16
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKN+EKVCEMCH+TLNK+ ++GDNGTI+ GG
Sbjct: 470 GKNYEKVCEMCHITLNKIAIFGDNGTITPGG 500
Score = 52.8 bits (125), Expect(2) = 1e-16
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+E+DFETIADFL
Sbjct: 500 GVRIGTPAMTSRGCLEADFETIADFL 525
>emb|CBI23759.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 58.9 bits (141), Expect(2) = 1e-16
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKN+EKVCEMCH+TLNK+ ++GDNGTI+ GG
Sbjct: 238 GKNYEKVCEMCHITLNKIAIFGDNGTITPGG 268
Score = 52.8 bits (125), Expect(2) = 1e-16
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+E+DFETIADFL
Sbjct: 268 GVRIGTPAMTSRGCLEADFETIADFL 293
>gb|EXB87375.1| Serine hydroxymethyltransferase 1 [Morus notabilis]
Length = 592
Score = 58.9 bits (141), Expect(2) = 2e-16
Identities = 23/31 (74%), Positives = 29/31 (93%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKN+EKVCEMCH+TLNK+ ++GDNGTI+ GG
Sbjct: 485 GKNYEKVCEMCHITLNKIAIFGDNGTITPGG 515
Score = 52.4 bits (124), Expect(2) = 2e-16
Identities = 23/26 (88%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+ESDFETIA+FL
Sbjct: 515 GVRIGTPAMTSRGCLESDFETIAEFL 540
>ref|NP_564473.1| putative serine hydroxymethyltransferase [Arabidopsis thaliana]
gi|75243461|sp|Q84WV0.1|GLYC7_ARATH RecName: Full=Serine
hydroxymethyltransferase 7; Short=AtSHMT7; AltName:
Full=Glycine hydroxymethyltransferase 7; AltName:
Full=Serine methylase 7 gi|27754227|gb|AAO22567.1|
putative hydroxymethyltransferase [Arabidopsis thaliana]
gi|332193741|gb|AEE31862.1| putative serine
hydroxymethyltransferase [Arabidopsis thaliana]
Length = 598
Score = 55.5 bits (132), Expect(2) = 3e-16
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK ++GDNGTIS GG
Sbjct: 488 GKVYEKVCEMCHITLNKTAIFGDNGTISPGG 518
Score = 55.1 bits (131), Expect(2) = 3e-16
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFET+ADFL
Sbjct: 518 GVRIGTPAMTTRGCIESDFETMADFL 543
>ref|XP_002893915.1| hypothetical protein ARALYDRAFT_891266 [Arabidopsis lyrata subsp.
lyrata] gi|297339757|gb|EFH70174.1| hypothetical protein
ARALYDRAFT_891266 [Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 55.5 bits (132), Expect(2) = 3e-16
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK ++GDNGTIS GG
Sbjct: 484 GKVYEKVCEMCHITLNKTAIFGDNGTISPGG 514
Score = 55.1 bits (131), Expect(2) = 3e-16
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFET+ADFL
Sbjct: 514 GVRIGTPAMTTRGCIESDFETMADFL 539
>gb|AAG52195.1|AC021199_1 putative hydroxymethyltransferase; 49598-47322 [Arabidopsis
thaliana]
Length = 578
Score = 55.5 bits (132), Expect(2) = 3e-16
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK ++GDNGTIS GG
Sbjct: 468 GKVYEKVCEMCHITLNKTAIFGDNGTISPGG 498
Score = 55.1 bits (131), Expect(2) = 3e-16
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFET+ADFL
Sbjct: 498 GVRIGTPAMTTRGCIESDFETMADFL 523
>gb|AAM61506.1| putative hydroxymethyltransferase [Arabidopsis thaliana]
Length = 578
Score = 55.5 bits (132), Expect(2) = 3e-16
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK ++GDNGTIS GG
Sbjct: 468 GKVYEKVCEMCHITLNKTAIFGDNGTISPGG 498
Score = 55.1 bits (131), Expect(2) = 3e-16
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFET+ADFL
Sbjct: 498 GVRIGTPAMTTRGCIESDFETMADFL 523
>ref|XP_002529531.1| serine hydroxymethyltransferase, putative [Ricinus communis]
gi|223530979|gb|EEF32834.1| serine
hydroxymethyltransferase, putative [Ricinus communis]
Length = 590
Score = 55.1 bits (131), Expect(2) = 8e-16
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+T+NK+ ++GDNGTIS GG
Sbjct: 486 GKIYEKVCEMCHITVNKIAVFGDNGTISPGG 516
Score = 53.9 bits (128), Expect(2) = 8e-16
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+ESDFETIADFL
Sbjct: 516 GVRIGTPAMTSRGCLESDFETIADFL 541
>ref|XP_002285823.1| PREDICTED: serine hydroxymethyltransferase 1-like [Vitis vinifera]
Length = 584
Score = 57.8 bits (138), Expect(2) = 8e-16
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 4/45 (8%)
Frame = -2
Query: 250 SHLLVFS----NPQGKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
+HLL++ + GKN+EKVCE+CH+TLNK +YGDNG IS GG
Sbjct: 461 NHLLLWDLTDLHITGKNYEKVCELCHITLNKTAIYGDNGAISPGG 505
Score = 51.2 bits (121), Expect(2) = 8e-16
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIG+PAMTTRGC+E+DFETIA+FL
Sbjct: 505 GVRIGSPAMTTRGCLEADFETIAEFL 530
>emb|CBI19093.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 57.8 bits (138), Expect(2) = 8e-16
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 4/45 (8%)
Frame = -2
Query: 250 SHLLVFS----NPQGKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
+HLL++ + GKN+EKVCE+CH+TLNK +YGDNG IS GG
Sbjct: 431 NHLLLWDLTDLHITGKNYEKVCELCHITLNKTAIYGDNGAISPGG 475
Score = 51.2 bits (121), Expect(2) = 8e-16
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIG+PAMTTRGC+E+DFETIA+FL
Sbjct: 475 GVRIGSPAMTTRGCLEADFETIAEFL 500
>ref|XP_006396020.1| hypothetical protein EUTSA_v10003888mg [Eutrema salsugineum]
gi|557092659|gb|ESQ33306.1| hypothetical protein
EUTSA_v10003888mg [Eutrema salsugineum]
Length = 587
Score = 55.5 bits (132), Expect(2) = 1e-15
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK ++GDNGTIS GG
Sbjct: 480 GKVYEKVCEMCHITLNKTAIFGDNGTISPGG 510
Score = 53.1 bits (126), Expect(2) = 1e-15
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFETIAD L
Sbjct: 510 GVRIGTPAMTTRGCLESDFETIADIL 535
>ref|XP_006349365.1| PREDICTED: serine hydroxymethyltransferase 7-like [Solanum
tuberosum]
Length = 594
Score = 55.8 bits (133), Expect(2) = 1e-15
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKNFEKVCE+CH+TLNKV+++ DNG+I+ GG
Sbjct: 487 GKNFEKVCELCHITLNKVMVFDDNGSITPGG 517
Score = 52.4 bits (124), Expect(2) = 1e-15
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+ESDF+T+ADFL
Sbjct: 517 GVRIGTPAMTSRGCIESDFDTMADFL 542
>ref|XP_003564749.1| PREDICTED: serine hydroxymethyltransferase 1-like [Brachypodium
distachyon]
Length = 586
Score = 55.8 bits (133), Expect(2) = 2e-15
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKNFEKVCE+CH+++NK +YGDNG+IS GG
Sbjct: 481 GKNFEKVCELCHISINKTPIYGDNGSISPGG 511
Score = 52.0 bits (123), Expect(2) = 2e-15
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+E DFE IADFL
Sbjct: 511 GVRIGTPAMTTRGCLEEDFEVIADFL 536
>gb|EOX98086.1| Serine hydroxymethyltransferase 6 isoform 1 [Theobroma cacao]
Length = 596
Score = 53.9 bits (128), Expect(2) = 2e-15
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+ESDFETIADFL
Sbjct: 517 GVRIGTPAMTSRGCLESDFETIADFL 542
Score = 53.5 bits (127), Expect(2) = 2e-15
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCEMCH+TLNK+ ++GDNG I+ GG
Sbjct: 487 GKIYEKVCEMCHITLNKIAIFGDNGAITPGG 517
>ref|NP_001044960.1| Os01g0874900 [Oryza sativa Japonica Group]
gi|19386847|dbj|BAB86225.1| putative
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|20804756|dbj|BAB92441.1| putative serine
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|113534491|dbj|BAF06874.1| Os01g0874900 [Oryza sativa
Japonica Group] gi|125528561|gb|EAY76675.1| hypothetical
protein OsI_04630 [Oryza sativa Indica Group]
gi|125572826|gb|EAZ14341.1| hypothetical protein
OsJ_04263 [Oryza sativa Japonica Group]
gi|215737211|dbj|BAG96140.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 600
Score = 55.1 bits (131), Expect(2) = 3e-15
Identities = 22/31 (70%), Positives = 28/31 (90%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKNFEKVCE CH+++NK+ +YGDNG+IS GG
Sbjct: 493 GKNFEKVCEACHISINKMPIYGDNGSISPGG 523
Score = 52.0 bits (123), Expect(2) = 3e-15
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+E DFE IADFL
Sbjct: 523 GVRIGTPAMTTRGCLEDDFEVIADFL 548
>ref|XP_004230481.1| PREDICTED: serine hydroxymethyltransferase 2-like [Solanum
lycopersicum]
Length = 594
Score = 55.8 bits (133), Expect(2) = 3e-15
Identities = 22/31 (70%), Positives = 29/31 (93%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKNFEKVCE+CH+TLNKV+++ DNG+I+ GG
Sbjct: 487 GKNFEKVCELCHITLNKVMVFDDNGSITPGG 517
Score = 51.2 bits (121), Expect(2) = 3e-15
Identities = 21/26 (80%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+E+DF+T+ADFL
Sbjct: 517 GVRIGTPAMTSRGCIENDFDTMADFL 542
>ref|XP_006646525.1| PREDICTED: serine hydroxymethyltransferase 7-like [Oryza
brachyantha]
Length = 548
Score = 54.7 bits (130), Expect(2) = 5e-15
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKNFEKVCE CH+++NK +YGDNG+IS GG
Sbjct: 441 GKNFEKVCEACHISINKTPIYGDNGSISPGG 471
Score = 51.6 bits (122), Expect(2) = 5e-15
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+E DFE IADFL
Sbjct: 471 GVRIGTPAMTTRGCLEDDFELIADFL 496
>ref|NP_001055615.1| Os05g0429000 [Oryza sativa Japonica Group]
gi|46391143|gb|AAS90670.1| putative
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|55733911|gb|AAV59418.1| putative
hydroxymethyltransferase [Oryza sativa Japonica Group]
gi|113579166|dbj|BAF17529.1| Os05g0429000 [Oryza sativa
Japonica Group] gi|215766518|dbj|BAG98826.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 587
Score = 55.5 bits (132), Expect(2) = 7e-15
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GKNFEKVCE CH++LNK +YGDNG+IS GG
Sbjct: 480 GKNFEKVCEACHISLNKTPIYGDNGSISPGG 510
Score = 50.4 bits (119), Expect(2) = 7e-15
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMTTRGC+ESDFE +A+FL
Sbjct: 510 GVRIGTPAMTTRGCLESDFEIMAEFL 535
>ref|XP_006369360.1| hypothetical protein POPTR_0001s21950g [Populus trichocarpa]
gi|550347852|gb|ERP65929.1| hypothetical protein
POPTR_0001s21950g [Populus trichocarpa]
Length = 578
Score = 53.9 bits (128), Expect(2) = 7e-15
Identities = 24/26 (92%), Positives = 26/26 (100%)
Frame = -1
Query: 122 GVRIGTPAMTTRGCVESDFETIADFL 45
GVRIGTPAMT+RGC+ESDFETIADFL
Sbjct: 501 GVRIGTPAMTSRGCLESDFETIADFL 526
Score = 52.0 bits (123), Expect(2) = 7e-15
Identities = 19/31 (61%), Positives = 28/31 (90%)
Frame = -2
Query: 220 GKNFEKVCEMCHMTLNKVLLYGDNGTISYGG 128
GK +EKVCE+CH+T+NK+ ++G+NGTI+ GG
Sbjct: 471 GKAYEKVCELCHITVNKIAIFGENGTITPGG 501