BLASTX nr result
ID: Rheum21_contig00009103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009103
(866 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccin... 67 6e-09
ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259... 67 6e-09
ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus] gi|... 67 6e-09
ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|1705... 67 6e-09
ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209... 67 6e-09
emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera] 67 6e-09
ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 67 8e-09
ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosoma... 67 8e-09
ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|32... 67 8e-09
ref|YP_514664.1| ribosomal protein L2 [Oryza sativa Indica Group... 64 7e-08
sp|P92812.2|RM02_ORYSJ RecName: Full=60S ribosomal protein L2, m... 64 7e-08
gb|AEK66742.1| ribosomal protein L2 [Ferrocalamus rimosivaginus] 64 7e-08
gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo] 64 7e-08
ref|YP_003433878.1| ribosomal protein large subunit 2 [Oryza ruf... 64 7e-08
ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoeni... 63 1e-07
ref|XP_002335968.1| predicted protein [Populus trichocarpa] 62 3e-07
ref|XP_002333101.1| predicted protein [Populus trichocarpa] 62 3e-07
ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriod... 62 4e-07
emb|CAA57911.1| ribosomal protein L2 [Arabidopsis thaliana] 62 4e-07
ref|XP_006422248.1| hypothetical protein CICLE_v10005397mg [Citr... 61 5e-07
>ref|YP_008999589.1| ribosomal protein L2 (mitochondrion) [Vaccinium macrocarpon]
gi|549531664|gb|AGX28803.1| ribosomal protein L2
(mitochondrion) [Vaccinium macrocarpon]
Length = 335
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 45
>ref|YP_003587363.1| ribosomal protein L2 [Cucurbita pepo] gi|259156826|gb|ACV96687.1|
ribosomal protein L2 [Cucurbita pepo]
Length = 332
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 45
>ref|YP_003587229.1| ribosomal protein L2 [Citrullus lanatus]
gi|259156783|gb|ACV96645.1| ribosomal protein L2
[Citrullus lanatus]
Length = 332
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 45
>ref|YP_002608204.1| ribosomal protein L2 [Carica papaya] gi|170522383|gb|ACB20493.1|
ribosomal protein L2 (mitochondrion) [Carica papaya]
Length = 335
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 45
>ref|YP_002608368.1| ribosomal protein L2 [Vitis vinifera] gi|209954165|emb|CAQ77612.1|
ribosomal protein L2 [Vitis vinifera]
gi|239764759|gb|ACS15228.1| ribosomal protein L2 [Vitis
vinifera]
Length = 334
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 45
>emb|CAN61455.1| hypothetical protein VITISV_029794 [Vitis vinifera]
Length = 336
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/45 (82%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 45
>ref|XP_004168533.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 67.0 bits (162), Expect = 8e-09
Identities = 39/51 (76%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -3
Query: 597 MITK*TMRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MIT T R+SQE ALR TLSTGKSAGRNSSG ITVFH GGSKRLQR+I
Sbjct: 1 MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRI 51
>ref|XP_004152990.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L2,
mitochondrial-like [Cucumis sativus]
Length = 386
Score = 67.0 bits (162), Expect = 8e-09
Identities = 39/51 (76%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -3
Query: 597 MITK*TMRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MIT T R+SQE ALR TLSTGKSAGRNSSG ITVFH GGSKRLQR+I
Sbjct: 1 MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRI 51
>ref|YP_004849339.1| ribosomal protein L2 [Cucumis sativus] gi|325305597|gb|ADZ10766.1|
ribosomal protein L2 [Cucumis sativus]
Length = 341
Score = 67.0 bits (162), Expect = 8e-09
Identities = 39/51 (76%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = -3
Query: 597 MITK*TMRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MIT T R+SQE ALR TLSTGKSAGRNSSG ITVFH GGSKRLQR+I
Sbjct: 1 MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRI 51
>ref|YP_514664.1| ribosomal protein L2 [Oryza sativa Indica Group]
gi|194033244|ref|YP_002000581.1| ribosomal protein L2
[Oryza sativa Japonica Group]
gi|23495405|dbj|BAC19886.1| Ribosomal protein L2 [Oryza
sativa Japonica Group] gi|74100083|gb|AAZ99247.1|
ribosomal protein L2 (mitochondrion) [Oryza sativa
Indica Group] gi|74100138|gb|AAZ99301.1| ribosomal
protein L2 (mitochondrion) [Oryza sativa Japonica Group]
gi|74100192|gb|AAZ99354.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Japonica Group]
gi|353685231|gb|AER12994.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|353685298|gb|AER13060.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|374277621|gb|AEZ03727.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|374277672|gb|AEZ03777.1| ribosomal protein L2
(mitochondrion) [Oryza sativa Indica Group]
gi|528540449|dbj|BAN67503.1| ribosomal protein large
subunit 2 (mitochondrion) [Oryza rufipogon]
gi|528540486|dbj|BAN67539.1| ribosomal protein large
subunit 2 (mitochondrion) [Oryza rufipogon]
Length = 502
Score = 63.9 bits (154), Expect = 7e-08
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+S + ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQRKI
Sbjct: 1 MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKI 45
>sp|P92812.2|RM02_ORYSJ RecName: Full=60S ribosomal protein L2, mitochondrial
gi|218547415|sp|P0C8K6.1|RM02_ORYSA RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|218551750|sp|Q2F969.2|RM02_ORYSI RecName: Full=60S
ribosomal protein L2, mitochondrial
gi|193240423|dbj|BAA11350.2| ribosomal protein L2 [Oryza
sativa Japonica Group]
Length = 502
Score = 63.9 bits (154), Expect = 7e-08
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+S + ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQRKI
Sbjct: 1 MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKI 45
>gb|AEK66742.1| ribosomal protein L2 [Ferrocalamus rimosivaginus]
Length = 345
Score = 63.9 bits (154), Expect = 7e-08
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+S + ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQRKI
Sbjct: 1 MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKI 45
>gb|AEN56111.1| ribosomal protein L2 [Cucumis melo subsp. melo]
Length = 354
Score = 63.9 bits (154), Expect = 7e-08
Identities = 38/51 (74%), Positives = 40/51 (78%), Gaps = 1/51 (1%)
Frame = -3
Query: 597 MITK*TMRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MIT T R+SQE ALR TLSTGKSAGRNSSG ITVF GGSKRLQR+I
Sbjct: 1 MITISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRI 51
>ref|YP_003433878.1| ribosomal protein large subunit 2 [Oryza rufipogon]
gi|285026149|dbj|BAI67982.1| ribosomal protein large
subunit 2 [Oryza rufipogon] gi|285026205|dbj|BAI68037.1|
ribosomal protein large subunit 2 [Oryza sativa Indica
Group]
Length = 504
Score = 63.9 bits (154), Expect = 7e-08
Identities = 36/45 (80%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+S + ALR TLSTGKSAGRNSSG ITVFHR GGSKRLQRKI
Sbjct: 1 MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKI 45
>ref|YP_005090371.1| ribosomal protein L2 (mitochondrion) [Phoenix dactylifera]
gi|343478424|gb|AEM43912.1| ribosomal protein L2
(mitochondrion) [Phoenix dactylifera]
Length = 558
Score = 63.2 bits (152), Expect = 1e-07
Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+S + ALR TL+TGKSAGRNSSG ITVFHR GGSKRLQRKI
Sbjct: 1 MRQSLKGRALRHFTLNTGKSAGRNSSGRITVFHRGGGSKRLQRKI 45
>ref|XP_002335968.1| predicted protein [Populus trichocarpa]
Length = 79
Score = 62.0 bits (149), Expect = 3e-07
Identities = 34/45 (75%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR T TGKSAGRNSSG ITVFHR GGSKRLQR++
Sbjct: 1 MRQSQEGRALRQFTSRTGKSAGRNSSGRITVFHRGGGSKRLQRRM 45
>ref|XP_002333101.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 62.0 bits (149), Expect = 3e-07
Identities = 34/45 (75%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
Frame = -3
Query: 579 MRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+SQE ALR T TGKSAGRNSSG ITVFHR GGSKRLQR++
Sbjct: 1 MRQSQEGRALRQFTSRTGKSAGRNSSGRITVFHRGGGSKRLQRRM 45
>ref|YP_007905729.1| ribosomal protein L2 (mitochondrion) [Liriodendron tulipifera]
gi|480541934|gb|AGJ90427.1| ribosomal protein L2
(mitochondrion) [Liriodendron tulipifera]
Length = 554
Score = 61.6 bits (148), Expect = 4e-07
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -3
Query: 579 MRKSQEEIALRLTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR+ Q + TLSTGKSAGRNSSG ITVFHR GGSKRLQR++
Sbjct: 1 MRELQGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRM 44
>emb|CAA57911.1| ribosomal protein L2 [Arabidopsis thaliana]
Length = 306
Score = 61.6 bits (148), Expect = 4e-07
Identities = 31/44 (70%), Positives = 34/44 (77%)
Frame = -3
Query: 579 MRKSQEEIALRLTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
MR + + TLSTGKSAGRNSSG ITVFHR GGSKRLQR+I
Sbjct: 1 MRPGRARALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRI 44
>ref|XP_006422248.1| hypothetical protein CICLE_v10005397mg [Citrus clementina]
gi|568842841|ref|XP_006475340.1| PREDICTED: 60S
ribosomal protein L2, mitochondrial-like [Citrus
sinensis] gi|557524121|gb|ESR35488.1| hypothetical
protein CICLE_v10005397mg [Citrus clementina]
Length = 332
Score = 61.2 bits (147), Expect = 5e-07
Identities = 35/51 (68%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Frame = -3
Query: 597 MITK*TMRKSQEEIALR-LTLSTGKSAGRNSSGPITVFHRRGGSKRLQRKI 448
M TK M K +E ALR TL GKSAGRNSSG IT+FHR GGSKRLQR+I
Sbjct: 1 MGTKQAMTKFKEVRALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRI 51