BLASTX nr result
ID: Rheum21_contig00009053
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00009053
(1394 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003622194.1| Cellular nucleic acid-binding protein-like p... 121 6e-25
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355... 121 8e-25
emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera] 116 3e-23
emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera] 115 3e-23
ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medic... 108 5e-21
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc... 107 9e-21
ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medic... 107 2e-20
gb|AAX96504.1| retrotransposon protein, putative, Ty3-gypsy sub-... 106 3e-20
gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptas... 104 8e-20
gb|ABC94893.1| polyprotein [Oryza australiensis] 103 1e-19
gb|EMJ28398.1| hypothetical protein PRUPE_ppa019381mg [Prunus pe... 102 4e-19
gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo] 102 4e-19
ref|XP_006598445.1| PREDICTED: uncharacterized protein LOC102661... 102 5e-19
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy... 101 9e-19
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 101 9e-19
emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group] 101 9e-19
gb|EOY16854.1| DNA/RNA polymerases superfamily protein [Theobrom... 100 1e-18
gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-... 100 1e-18
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc... 100 1e-18
gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo] 100 1e-18
>ref|XP_003622194.1| Cellular nucleic acid-binding protein-like protein, partial [Medicago
truncatula] gi|355497209|gb|AES78412.1| Cellular nucleic
acid-binding protein-like protein, partial [Medicago
truncatula]
Length = 509
Score = 121 bits (304), Expect = 6e-25
Identities = 100/369 (27%), Positives = 157/369 (42%), Gaps = 13/369 (3%)
Frame = -3
Query: 1071 ALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWE 892
A V + P F G+ + W +ER+F ++ TE ++V + L +EA +WW
Sbjct: 54 AQAVGHQNHPPTFKGRYDLDGAQTWLKEIERVFRVMQCTEVQKVRFGTHMLAEEADDWWI 113
Query: 891 S---TDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLL 721
S D V+ W +F+ + DR+F +R +K EFL K + VTE A KF L
Sbjct: 114 SLLPVLKQDGAVVTWAVFRREFLDRYFLEDVRGKKEIEFLELKQGNMSVTEYAAKFVELA 173
Query: 720 QYAEPKITSEAQKIWY---FHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKR 550
++ P T+E K F + +I + + T V + EE TK
Sbjct: 174 KFY-PHYTAETAKFSKCIKFENGLRAEIKRAIGYQKIRTFSDLVSSCR----IYEEDTKA 228
Query: 549 RNR---QRSMQGQSQATGFKRPAPPSNFEKSGKART--EMTPVXXXXXXXXXXXXXQCFN 385
+ +R ++GQ P P S GK R E P C+
Sbjct: 229 HYKIVNERKVKGQQSC-----PKPYSAPADKGKQRMVDERRP-----RKKDAHVEIVCYT 278
Query: 384 CGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTE-SQQGSV-NQNTRPKFKPAE 211
CG GHK+ CP++ K CF CG++GH C+ +++G + +Q +PK
Sbjct: 279 CGEKGHKSNACPRDVKRCFCCGKKGHTLAECKHDDIVCFNCNEEGHIGSQCKKPK----- 333
Query: 210 TPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGA 31
AQ G+ A++G Q + + +GT Y ST + ++ D+GA
Sbjct: 334 --------KAQTTGRVFALTGTQ----------TESEDHLIRGTCYFDSTPLVVIIDTGA 375
Query: 30 THSFISENC 4
TH FI+ +C
Sbjct: 376 THCFIAIDC 384
>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1| Pol
polyprotein [Medicago truncatula]
Length = 745
Score = 121 bits (303), Expect = 8e-25
Identities = 97/366 (26%), Positives = 161/366 (43%), Gaps = 8/366 (2%)
Frame = -3
Query: 1074 RALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWW 895
R L+ P F G+ + W +ER+F ++ TE ++V + QL +EA +WW
Sbjct: 35 RMLETFMKKNPPTFKGRCDPDGAQTWLKEIERIFRVMQCTEDQKVRFGTHQLAEEADDWW 94
Query: 894 ES---TDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHL 724
+ T + V+ W +F+ + R+F +R +K EFL K + VTE A KF L
Sbjct: 95 VALLPTLGQEGAVVTWAVFRREFLRRYFPEDVRGKKEIEFLELKQGNMSVTEYAAKFVEL 154
Query: 723 LQYAEPKITSEA---QKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTK 553
++ P T+E + F + PDI + + + V++ E + K
Sbjct: 155 SKFY-PHYTAENAEFSRCIKFENGLRPDIKRAIGYQQLRVFQDLVNSCRIYEEDTKAHYK 213
Query: 552 RRNRQRSMQGQSQATGFKRPAPPSNFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAY 373
N ++ QS+ + PA K + +M V FNCG
Sbjct: 214 VVNERKGKGQQSRPKPYSAPAD--------KGKQKMVDVRRPKKKDAAEIVY--FNCGEK 263
Query: 372 GHKNIECPKEKKSCFICGREGHLKQFC-RLGKQTGTESQQGSV-NQNTRPKFKPAETPSP 199
GHK+ CP+E K C CG++GH+ C R + +G + +Q T+PK P
Sbjct: 264 GHKSNACPEEIKKCVRCGKKGHVVADCNRTDIVCFNCNGEGHISSQCTQPKRAP------ 317
Query: 198 SMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATHSF 19
G+ A++G Q + D+ + +GT Y+++T + + D+GATH F
Sbjct: 318 -------TTGRVFALTGTQTE------SEDR----LIRGTCYINNTPLVAIIDTGATHCF 360
Query: 18 ISENCV 1
I+ +CV
Sbjct: 361 IAFDCV 366
>emb|CAN66189.1| hypothetical protein VITISV_006047 [Vitis vinifera]
Length = 1573
Score = 116 bits (290), Expect = 3e-23
Identities = 88/356 (24%), Positives = 151/356 (42%), Gaps = 7/356 (1%)
Frame = -3
Query: 1050 MRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWESTD-LDD 874
M+P +F+G+ + HW M R+ ++ E +V +A+ L D+A WWES + D
Sbjct: 213 MQPPSFNGEPSAEASEHWLRRMRRILVGLDIPEERRVGLATYMLVDKADFWWESMKRVYD 272
Query: 873 SPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEPKITS 694
+ V+ W F+ ++F + K EF + + V E ++F+ L ++A I+
Sbjct: 273 TEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMLVLEYESRFSELSRFALGMISE 332
Query: 693 EAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQRSMQGQSQ 514
E +K F + + P I +V + V A +E ++E+ + R ++ +G+ Q
Sbjct: 333 EGEKARRFQQGLRPIIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREQKGDKKGK-Q 391
Query: 513 ATGFKRPAPPSNFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKS 334
G P R C+ CGA H CP
Sbjct: 392 RMGESSQGPQQRQRTQQFERRPSFYAGEGQIAQRAATNRVCYGCGAGDHLWRACPLR--- 448
Query: 333 CFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETPSPSMQTTAQNKGKAPAV 154
G Q QGS Q P+ PA + + +Q + +
Sbjct: 449 ----------------GAQXAQPQSQGSSQQQPMPQLPPAAQGTRTTTMNSQTRSSQGSN 492
Query: 153 SGGQGQ----RLYEM--READKPNAPVAQGTLYLHSTSVCILFDSGATHSFISENC 4
+ G+G+ R++ + E DK +A + +G + ++ST V +LFD+GATHSFIS +C
Sbjct: 493 ARGRGRPAAGRVFALTPTEPDK-DALLVEGMILVYSTWVRVLFDTGATHSFISASC 547
>emb|CAN77191.1| hypothetical protein VITISV_006389 [Vitis vinifera]
Length = 1387
Score = 115 bits (289), Expect = 3e-23
Identities = 90/361 (24%), Positives = 160/361 (44%), Gaps = 5/361 (1%)
Frame = -3
Query: 1071 ALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWE 892
A+K M+P +F+G+ + HW M R+ ++ E +V +A+ L D+A WWE
Sbjct: 51 AMKRFMVMQPPSFNGEPSAEAAEHWLXRMRRILVGLDIPEERRVGLATYMLVDKADFWWE 110
Query: 891 STD-LDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQY 715
S + D+ V+ W F+ ++F + K EF + + V E ++F+ L ++
Sbjct: 111 SMKRVYDTEVMTWEEFERIFLGKYFGEVAKHAKRMEFEHLIQGTMSVLEYESRFSELSRF 170
Query: 714 AEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQR 535
A I+ E +K F + + P I +V + V A +E ++E+ + R ++R
Sbjct: 171 ALGMISEEGEKARRFQQGLRPAIRNRLVPLAIRDYSELVKRALLVEQDIDETNQIREKKR 230
Query: 534 SMQGQSQATGFKRPAPPSNFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNIE 355
+G+ Q G P ++ + E P + A G + +
Sbjct: 231 DRKGK-QRMGESSQGPQ---QRQRTQQFERRP-----------------SFYAEGGQIAQ 269
Query: 354 CPKEKKSCFICGREGHLKQFCRL-GKQTGTESQQGSVNQNTRPKFKPAETPSP--SMQTT 184
+ C+ CG HL + C L Q QGS Q + F+P + P M
Sbjct: 270 RAAANRVCYGCGAGDHLWRACPLRDTQQARPQSQGSSQQQSVVSFQPPQFQLPYYQMPQL 329
Query: 183 AQNKGKAPAVSGGQGQRLYEMREAD-KPNAPVAQGTLYLHSTSVCILFDSGATHSFISEN 7
G+ +G R++ + + + +A + +G + ++ST V +LFD+GATHSFIS +
Sbjct: 330 PPTTGRGRQAAG----RVFALTPTESEEDALLVKGMILVYSTWVRVLFDTGATHSFISAS 385
Query: 6 C 4
C
Sbjct: 386 C 386
>ref|XP_003605727.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355506782|gb|AES87924.1| Cellular nucleic acid-binding
protein [Medicago truncatula]
Length = 458
Score = 108 bits (270), Expect = 5e-21
Identities = 92/356 (25%), Positives = 152/356 (42%), Gaps = 9/356 (2%)
Frame = -3
Query: 1044 PGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWES---TDLDD 874
P F G+ + W +ER+F ++ +E ++V + L +EA +WW S D
Sbjct: 44 PPTFKGRYDPDGAQKWLKEVERIFRVMQCSEVQKVRFGTHMLAEEADDWWVSLLPVLEQD 103
Query: 873 SPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEPKITS 694
V+ W +F+ + +R+F +R +K EFL K + VTE A KF L ++ P T+
Sbjct: 104 GAVVTWAVFRREFLNRYFPEDVRGKKEIEFLELKQGDMSVTEYAAKFVELAKFY-PHYTA 162
Query: 693 EAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQRSMQGQSQ 514
E + ++ + D+ A YK+ + +R QS+
Sbjct: 163 EIAEFSKCIKFENEDMK----------------AHYKV----------MSERRGKGQQSR 196
Query: 513 ATGFKRPAPPS----NFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNIECPK 346
+ PA N E+ K R T + CF CG GHK+ C +
Sbjct: 197 LKPYSAPADKGKQRLNDERRPKRRDAPTDIV-------------CFKCGEKGHKSNVCDR 243
Query: 345 EKKSCFICGREGHLKQFCRLGKQTGTE-SQQGSV-NQNTRPKFKPAETPSPSMQTTAQNK 172
EKK CF CG++GH C+ G +++G + +Q T+PK +
Sbjct: 244 EKKKCFRCGQKGHTLADCKHGDVVCYNCNEEGHISSQCTQPK-------------KVRTG 290
Query: 171 GKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATHSFISENC 4
GK A++G Q + E R + +GT + +ST + + D+ A H FI+ +C
Sbjct: 291 GKVFALNG--TQTVNEDR--------LIRGTCFFNSTPLIAIIDTSALHYFIAVDC 336
>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 107 bits (268), Expect = 9e-21
Identities = 87/351 (24%), Positives = 146/351 (41%), Gaps = 5/351 (1%)
Frame = -3
Query: 1047 RPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWES-TDLDDS 871
RP F E V+ W ++R + V+ T E+ AS QLR A++WWE+ +
Sbjct: 425 RPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWENYCNAHPE 484
Query: 870 PV-LNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEPKITS 694
P + W F + + K +EF K + E ++FN L +YA ++ +
Sbjct: 485 PTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSINEYLSQFNKLARYAPEEVDT 544
Query: 693 EAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQRSMQGQSQ 514
+ +KI F + ++ + ++ H T + ++ A LE +E+T+ +++S +
Sbjct: 545 DKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINNALLLEDARKEATEEYKKRKSNHQGNS 604
Query: 513 ATGFKRP--APPSNFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNIECPKEK 340
+ G RP P + +SG + + CF C GH +CP
Sbjct: 605 SRGAPRPRYGQPMQYHQSGPSAVQ------------------CFRCNQMGHYARQCP--- 643
Query: 339 KSCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETPS-PSMQTTAQNKGKA 163
Q T + G N +T PA T S PS Q + Q G
Sbjct: 644 --------------------QNPTNTNSGHANGSTARTPTPAATQSRPSSQASGQ--GSR 681
Query: 162 PAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATHSFISE 10
+ + G+G+ + E + V G ++S +LFDSGA+HSFIS+
Sbjct: 682 ASNNFGRGRVNHIQAETAQDAPDVVMGMFSVNSVPAIVLFDSGASHSFISQ 732
>ref|XP_003635931.1| Cellular nucleic acid-binding protein [Medicago truncatula]
gi|355501866|gb|AES83069.1| Cellular nucleic acid-binding
protein [Medicago truncatula]
Length = 558
Score = 107 bits (266), Expect = 2e-20
Identities = 85/365 (23%), Positives = 141/365 (38%), Gaps = 8/365 (2%)
Frame = -3
Query: 1074 RALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWW 895
R L+ P F + + +W +ER+F ++ +E ++V + L +EA +WW
Sbjct: 77 RMLETFLRNHPPTFKERYDPDGAQNWLKEVERVFRVMQCSEVQKVRFGAHMLAEEAEDWW 136
Query: 894 ESTDL---DDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHL 724
S D + W +F+ + +R+F +R +K EFL K + VTE KF L
Sbjct: 137 VSLLPILEQDGVAVTWAVFRREFLNRYFPEDVRGKKEIEFLELKQGDMSVTEYVAKFVEL 196
Query: 723 LQYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRN 544
++ P T+E K F + DI + + V + E + K +
Sbjct: 197 AKFY-PHYTAEFSKCIKFKNGLRADIKRAIGYQKIRNFYDLVSSCRIYEEDTKAHYKVMS 255
Query: 543 RQRSMQGQSQATGFKRPAPPS----NFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGA 376
+R QS+ + PA N E+ + R T + CF CG
Sbjct: 256 ERRGKGQQSRPKPYSAPANKVKQRLNDERRPRRRDAPTEIV-------------CFKCGE 302
Query: 375 YGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTE-SQQGSVNQNTRPKFKPAETPSP 199
GHK+ C +++K CF CG++GH C+ G ++G ++ R
Sbjct: 303 KGHKSNVCDRDEKKCFRCGKKGHTLADCKRGDVVCYNCDEEGHISSQCR----------- 351
Query: 198 SMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATHSF 19
P Q L+L+ST + + D+GATH F
Sbjct: 352 ---------------------------------KPTYQRYLFLYSTPLIAIIDTGATHCF 378
Query: 18 ISENC 4
I+ +C
Sbjct: 379 IAVDC 383
>gb|AAX96504.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550471|gb|ABA93268.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1506
Score = 106 bits (264), Expect = 3e-20
Identities = 85/369 (23%), Positives = 150/369 (40%), Gaps = 20/369 (5%)
Frame = -3
Query: 1059 VNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWES--T 886
V P +F + + W +E + E+ A+ L+ A+ WWE+ T
Sbjct: 89 VQRTHPPHFSSAADPLAADDWLRDIEIKLNLCRCDPVEKATFAAYYLQGAAAAWWETYKT 148
Query: 885 DLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEP 706
+ + W +F+ + E K KEFL K + E +FN+L +YA
Sbjct: 149 LIPPDEPITWTVFREGFRSAHIPAGLMEIKKKEFLNLKQGNMPFMEFMERFNYLGRYAAS 208
Query: 705 KITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQ---R 535
+ +E +K+ + ++P++ + H ++++ VD A ++E + +E + R R+ +
Sbjct: 209 DLNTETKKVELCRDRLAPELKHALAAHEITSMKTLVDKALRVESSEKEVVEDRKRKWAAK 268
Query: 534 SMQGQSQATGFK----------RPAPPSNFEKSGKARTEMT----PVXXXXXXXXXXXXX 397
G S +T + P PP + +T++
Sbjct: 269 KFAGSSSSTRPRLAPSPAVRPMAPQPPRQMYVPPRPQTQLVRQVPRAVQAAGDASRNANV 328
Query: 396 QCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKP 217
C+NCG GH + CP K ++G SQ P+ +P
Sbjct: 329 TCYNCGKKGHYSPSCPYPKTG------------------KSGPYSQGAPQQPRGPPQVQP 370
Query: 216 AETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAP-VAQGTLYLHSTSVCILFD 40
+ +P++ PA + G+G RL + + +AP V GT +HS + +LFD
Sbjct: 371 GQRGAPAV--------PKPAPTFGRG-RLNHVTAEEATDAPGVVLGTFLVHSIPLTVLFD 421
Query: 39 SGATHSFIS 13
SGATHSF+S
Sbjct: 422 SGATHSFMS 430
>gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
CCHC-type; Peptidase aspartic, active site;
Retrotransposon gag protein [Medicago truncatula]
Length = 912
Score = 104 bits (260), Expect = 8e-20
Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 11/330 (3%)
Frame = -3
Query: 957 TEAEQVHIASLQLRDEASEWWES---TDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKE 787
TE ++V + QL +EA +WW + T + VL W +F+ + R+F +R +K E
Sbjct: 63 TEDQKVRFGTHQLVEEADDWWVALLPTLGQEGAVLTWAVFRREFLRRYFPEDVRGKKEIE 122
Query: 786 FLYPKTDGLKVTELATKFNHLLQYAEPKITSEA---QKIWYFHEWMSPDINPWMVHHTCS 616
FL K + VTE A KF L ++ P T+E + F + PDI + +
Sbjct: 123 FLELKQGNMSVTEYAAKFVELSKFY-PHYTAENAEFSRCIKFENGLRPDIKRAIGYQQLR 181
Query: 615 TLEQYVDAAYKLEVTLEESTKRRNR---QRSMQGQSQATGFKRPAPPSNFEKSGKARTEM 445
+ V++ EE+TK + +R+ +GQ RP P S GK +
Sbjct: 182 VFQDLVNSCR----IYEENTKAHYKVVNERNGKGQQS-----RPKPYSAPADKGKQKM-- 230
Query: 444 TPVXXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFC-RLGKQTGT 268
V CFNCG GHK+ P+E K C CG++GH+ C R
Sbjct: 231 --VDVRRPKKKDAVEIVCFNCGEKGHKSNVYPEEIKKCVRCGKKGHVVADCNRTDIVCFN 288
Query: 267 ESQQGSV-NQNTRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPV 91
+ +G + +Q T+PK P G+ A++G Q + +
Sbjct: 289 CNGEGHISSQCTQPKRAP-------------TTGRVFALTGTQTEN----------EDRL 325
Query: 90 AQGTLYLHSTSVCILFDSGATHSFISENCV 1
+GT Y+ +T + + D+GATH FI+ +CV
Sbjct: 326 IRGTCYISNTPLVAIIDTGATHCFIAFDCV 355
>gb|ABC94893.1| polyprotein [Oryza australiensis]
Length = 1469
Score = 103 bits (258), Expect = 1e-19
Identities = 92/375 (24%), Positives = 145/375 (38%), Gaps = 17/375 (4%)
Frame = -3
Query: 1086 GEYGRALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEA 907
G G +L +P F E + W +E+ V EA++V A+ QL A
Sbjct: 42 GRGGSSLGEFMRAKPPTFSTAEEPMDAEDWLRVIEKKLTLVRVREADRVVFATNQLEGPA 101
Query: 906 SEWWES---TDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATK 736
S+WW++ T +D+ W F A + F A+ K EF + V E K
Sbjct: 102 SDWWDTYKETRAEDAGEPTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTSVQEYLNK 161
Query: 735 FNHLLQYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEEST 556
F L +YA + E +KI F E ++ ++ M+ ++ + ++ +LE +
Sbjct: 162 FTQLARYATSDLADEEEKIDKFIEGLNDELRGPMIGQDHTSFQSLINKVVRLEHDQKVVD 221
Query: 555 KRRNRQRSMQGQSQAT----------GFKRPAP----PSNFEKSGKARTEMTPVXXXXXX 418
R R+ +M Q T G+K P P + ++ T
Sbjct: 222 NNRKRRLAMARPFQGTPQRPKGATPSGWKPNVPATGRPLASDHVNRSATPQLRTPTPTLA 281
Query: 417 XXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQGSVNQN 238
CFNCG +GH + CPK + + G + GT +
Sbjct: 282 APGRRNVSCFNCGEFGHYSNSCPKPRNTPVRTG--------ANVTPVRGTPTPAAG---- 329
Query: 237 TRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTS 58
R F+ TP P+ T +G+ V + Q + V G ++ST
Sbjct: 330 -RGLFR---TPLPNEAATGFRRGQVNHVRAEEAQE----------DQSVLMGMFSINSTL 375
Query: 57 VCILFDSGATHSFIS 13
V +LFDSGA+HSFIS
Sbjct: 376 VKVLFDSGASHSFIS 390
>gb|EMJ28398.1| hypothetical protein PRUPE_ppa019381mg [Prunus persica]
Length = 505
Score = 102 bits (254), Expect = 4e-19
Identities = 97/408 (23%), Positives = 157/408 (38%), Gaps = 43/408 (10%)
Frame = -3
Query: 1095 RNRGEYGRALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLR 916
R R +K V + F G + + + +ER+F ++ + ++V +A+ L+
Sbjct: 70 RRRNTESSDIKRVKELGANEFHGSADPAEADACLTDVERIFEVLQCPDRDRVRLAAFLLK 129
Query: 915 DEASEWWEST--DLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELA 742
A W++ + L W F+ D+F+ + + EK EFL+ + + V E
Sbjct: 130 GNAYHGWKAVRRGYANPAALTWEEFQRVFFDQFYPHSYKNEKKSEFLHLRQGSMSVLEYE 189
Query: 741 TKFNHLLQYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKL--EVTL 568
KFN L ++A +T+E + F E + DI + +T T+ AA ++ + +L
Sbjct: 190 HKFNELSRFAPELVTTEEDRCTRFEEGLWLDIQAVVTANTYPTMRALAQAADRVARKYSL 249
Query: 567 EESTKRRNRQRS-----MQGQSQATGFKRPAPPSNF-----EKSGKARTEMTP------- 439
RR R S QG S+ G + S + SG R+ P
Sbjct: 250 GAGISRRRRDSSGFGEPSQGPSKRGGSSSSSAGSEWSGGRGSSSGSRRSGSRPAWSQHSG 309
Query: 438 ---VXXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKK----------SCFICGREGHLKQ 298
V C CG GH +CP+ + SC+ CG+ GH +
Sbjct: 310 QQSVASTAKDFSQQYNATCHGCGQTGHLRRDCPQRGQTSGPSRRSGVSCYHCGQAGHYRS 369
Query: 297 FCRL-------GKQTGTESQQGSVNQNTRPKFKPAETPSPSMQTTAQN--KGKAPAVSGG 145
C L GK+T + Q S Q + S + Q+ +G++ G
Sbjct: 370 ECPLLTVGGTAGKETWAQQGQSSRGQGQTESGASSSAAGSSSSSGVQSTFRGRSGRSQRG 429
Query: 144 QGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATHSFISENCV 1
Q R AQ T L + V L D ATHSFI+ + V
Sbjct: 430 QSGRSTTHARVFSMTHHEAQATPDLITARV--LIDPRATHSFITPSFV 475
>gb|AAO45751.1| gag-protease polyprotein [Cucumis melo subsp. melo]
Length = 429
Score = 102 bits (254), Expect = 4e-19
Identities = 96/364 (26%), Positives = 149/364 (40%), Gaps = 12/364 (3%)
Frame = -3
Query: 1068 LKVVNSMRPGNFDGKGES-VKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWE 892
L+ P FDG E + W S +E +F ++ E ++V A L D + WWE
Sbjct: 60 LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 119
Query: 891 STDL---DDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLL 721
+T+ D + W FK +FFS ++R+ K +EFL + + V + +F+ L
Sbjct: 120 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS 179
Query: 720 QYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNR 541
++A I +EA + F + DI + +T + DA L + ++ S + R
Sbjct: 180 RFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPAT---HADA---LRLAVDLSLQERAN 233
Query: 540 QRSMQGQSQATGFKR-------PAPPSNFEKSGKART-EMTPVXXXXXXXXXXXXXQCFN 385
G+ +G KR P P NF G+ R+ + P C
Sbjct: 234 SSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKP---FEAGEAARGKPLCTT 290
Query: 384 CGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETP 205
CG H C ++CF C +EGH C L + TG QG+
Sbjct: 291 CGK--HHLGRCLFGTRTCFKCRQEGHTADRCPL-RVTGIAQNQGA--------------- 332
Query: 204 SPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATH 25
A ++G+A A + EA+K V GTL + +LFDSG++H
Sbjct: 333 ------GAPHQGRAFATN---------RTEAEKAGT-VVTGTLPVLGHYALVLFDSGSSH 376
Query: 24 SFIS 13
SFIS
Sbjct: 377 SFIS 380
>ref|XP_006598445.1| PREDICTED: uncharacterized protein LOC102661177 [Glycine max]
Length = 670
Score = 102 bits (253), Expect = 5e-19
Identities = 89/382 (23%), Positives = 145/382 (37%), Gaps = 34/382 (8%)
Frame = -3
Query: 1044 PGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWEST----DLD 877
P F G + W +E++F +E + ++V A+ L DEA WWE+T +
Sbjct: 45 PPTFKGGYDPEGAEAWLREIEKIFRVMECQDHQKVLFATHMLADEAEYWWENTRPRLEGA 104
Query: 876 DSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEPKIT 697
V+ W F+ +++F ++ K EFL K + + V E A +F +L++Y P
Sbjct: 105 GGVVVQWETFRQTFLEKYFPEDVKNRKEMEFLELKQESMTVAEYAARFENLVRYF-PHYQ 163
Query: 696 SEA---QKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQRSMQ 526
EA K F + P++ + +H Q + + E T +
Sbjct: 164 GEAGERSKCVKFVNGLRPEVKMMVNYHGIHNFAQLTNMCRIFDEDQREKTAFYRNANASH 223
Query: 525 GQSQATGFKRPAPP--------SNFEKSGKARTEMTPV------------------XXXX 424
G+ + A P N + + + PV
Sbjct: 224 GKDKKPVTHNRAKPYSAPPGKYGNHSRGQRTSGGLQPVGGSSQPINRVSQSAGRSSGGSG 283
Query: 423 XXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQGSV- 247
+C CG GH EC + +CF C +GHL C ++ E + GS+
Sbjct: 284 APAIVTTPLRCGKCGRLGHIARECTDREVTCFNCQGKGHLNTSCPYPRR---EKRSGSLN 340
Query: 246 NQNTRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTLYLH 67
NQ+ RP+ G+ A+SG + E+ QG ++
Sbjct: 341 NQSGRPR----------------TTGRVFALSGADAAQSDEL----------IQGMCFIS 374
Query: 66 STSVCILFDSGATHSFISENCV 1
+ +L+DSGATHSFIS CV
Sbjct: 375 QVPLVVLYDSGATHSFISRVCV 396
>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
Group] gi|31431495|gb|AAP53268.1| retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1230
Score = 101 bits (251), Expect = 9e-19
Identities = 94/374 (25%), Positives = 149/374 (39%), Gaps = 24/374 (6%)
Frame = -3
Query: 1050 MRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWES--TDLD 877
++P F G ++ W ME+ F + T+ E++ A+ L+ A EWW++
Sbjct: 77 LKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDAHKKSYS 136
Query: 876 DSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEPKIT 697
+ + W +FK ++F +++ K KEFL K V E +F+ L ++A +
Sbjct: 137 ERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARFAPEFVQ 196
Query: 696 SEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNRQRSMQGQS 517
++ K F + + + + + V A LE K + QR GQ
Sbjct: 197 TDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLE-------KGYHEQRIEHGQP 249
Query: 516 QATGFKRPAPPSNFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKK 337
Q FK P + G +M +C C H CP
Sbjct: 250 QKK-FKTNNPQNQGRFRGNYSGQM------QRKSSENQGRKCPICQG-SHVPSICPNCWG 301
Query: 336 SCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETPSPSM----QTTAQNKG 169
CF CG GH + C L + + V+ T+P K TP PS+ ++A N G
Sbjct: 302 RCFECGEAGHTRYQCPL-----LQKGKNRVSSTTQPNTK-VLTPVPSLYLPGPSSANNHG 355
Query: 168 ----------------KAPAVSGGQGQRLYEMRE--ADKPNAPVAQGTLYLHSTSVCILF 43
++ GG R+Y + + A++ N V G + + S +LF
Sbjct: 356 PNQGKPLANTNTTRGMRSNNSQGGNHARVYNLTKSTAEESNT-VVTGNVLICSYPGKVLF 414
Query: 42 DSGATHSFISENCV 1
DSGATHSFIS N V
Sbjct: 415 DSGATHSFISTNFV 428
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 101 bits (251), Expect = 9e-19
Identities = 106/453 (23%), Positives = 185/453 (40%), Gaps = 51/453 (11%)
Frame = -3
Query: 1218 VMLSKGDLGVLHVPHARGVSVPPEVPRDEEQESFAPKEGVIRNRGEYGRA---------- 1069
+ LS + ++ P G P DE++ +AP ++++GE G+
Sbjct: 1477 IQLSTPESVIVMPPRRVGRGRLPRCYVDEQELPYAPG---VQDQGEIGQQRGARQEGADT 1533
Query: 1068 --LKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEW- 898
++ M P +F G + + ++ ++++F + ++ E+V +A+ QL+D A W
Sbjct: 1534 SRIREFLGMNPSSFTGSSTTEDLENFIEELKKIFDVMHMSDTERVELAAYQLKDVARTWF 1593
Query: 897 --WESTDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHL 724
W+ ++++P +W F+ FF R ++E K +EFL K + L V E + KF L
Sbjct: 1594 DQWKGGRVENAPPASWACFEEAFLGHFFPRELKEVKVREFLTLKQESLSVHEYSLKFTQL 1653
Query: 723 LQYAEPKITSEAQKIWYFHEWMS---------------PDINPWMVHHTCSTLEQYVDAA 589
+YA + ++ F +S DI+ MV+ E+ D
Sbjct: 1654 SRYAPEMVADMRNRMSLFVAGLSRLSSKEGRAAMLIGDMDISRLMVYVQQVEEEKLRDR- 1712
Query: 588 YKLEVTLEESTKRRNRQRSMQGQSQATGF----KRPAPPSNFEKSGKARTE--------- 448
E + K RN +G S + F K PA S + + R E
Sbjct: 1713 ---EEFRNKRVKTRNESGQQRGNSNRSSFQQRQKGPATSSARAPAPRYRGEHNVQNSKDF 1769
Query: 447 -MTPV-XXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQT 274
+TP C CG H +C + + CF CG+EGH + C KQ+
Sbjct: 1770 KVTPAQSSGSVVRGGSSFPACAKCGRV-HPG-KCRQGQTCCFRCGQEGHFMKECPKNKQS 1827
Query: 273 ----GTESQQGSVNQNTRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREA-D 109
G+ +Q S+ +P M + A + +GG RLY + +
Sbjct: 1828 SEKLGSRAQSSSI------------SPLDRMASRG-----ATSSTGGGANRLYAITSRHE 1870
Query: 108 KPNAP-VAQGTLYLHSTSVCILFDSGATHSFIS 13
+ N+P V G + + +V L D GA+ SF++
Sbjct: 1871 QENSPNVVTGMIKVFVFNVYALLDPGASLSFVT 1903
Score = 101 bits (251), Expect = 9e-19
Identities = 106/453 (23%), Positives = 185/453 (40%), Gaps = 51/453 (11%)
Frame = -3
Query: 1218 VMLSKGDLGVLHVPHARGVSVPPEVPRDEEQESFAPKEGVIRNRGEYGRA---------- 1069
+ LS + ++ P G P DE++ +AP ++++GE G+
Sbjct: 2987 IQLSTPESVIVMPPRRVGRGRLPRCYVDEQELPYAPG---VQDQGEIGQQRGARQEGADT 3043
Query: 1068 --LKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEW- 898
++ M P +F G + + ++ ++++F + ++ E+V +A+ QL+D A W
Sbjct: 3044 SRIREFLGMNPSSFTGSSTTEDLENFIEELKKIFDVMHMSDTERVELAAYQLKDVARTWF 3103
Query: 897 --WESTDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHL 724
W+ ++++P +W F+ FF R ++E K +EFL K + L V E + KF L
Sbjct: 3104 DQWKGGRVENAPPASWACFEEAFLGHFFPRELKEVKVREFLTLKQESLSVHEYSLKFTQL 3163
Query: 723 LQYAEPKITSEAQKIWYFHEWMS---------------PDINPWMVHHTCSTLEQYVDAA 589
+YA + ++ F +S DI+ MV+ E+ D
Sbjct: 3164 SRYAPEMVADMRNRMSLFVAGLSRLSSKEGRAAMLIGDMDISRLMVYVQQVEEEKLRDR- 3222
Query: 588 YKLEVTLEESTKRRNRQRSMQGQSQATGF----KRPAPPSNFEKSGKARTE--------- 448
E + K RN +G S + F K PA S + + R E
Sbjct: 3223 ---EEFRNKRVKTRNESGQQRGNSNRSSFQQRQKGPATSSARAPAPRYRGEHNVQNSKDF 3279
Query: 447 -MTPV-XXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQT 274
+TP C CG H +C + + CF CG+EGH + C KQ+
Sbjct: 3280 KVTPAQSSGSVVRGGSSFPACAKCGRV-HPG-KCRQGQTCCFRCGQEGHFMKECPKNKQS 3337
Query: 273 ----GTESQQGSVNQNTRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREA-D 109
G+ +Q S+ +P M + A + +GG RLY + +
Sbjct: 3338 SEKLGSRAQSSSI------------SPLDRMASRG-----ATSSTGGGANRLYAITSRHE 3380
Query: 108 KPNAP-VAQGTLYLHSTSVCILFDSGATHSFIS 13
+ N+P V G + + +V L D GA+ SF++
Sbjct: 3381 QENSPNVVTGMIKVFVFNVYALLDPGASLSFVT 3413
Score = 97.8 bits (242), Expect = 9e-18
Identities = 96/400 (24%), Positives = 163/400 (40%), Gaps = 39/400 (9%)
Frame = -3
Query: 1095 RNRGEYGRALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLR 916
R G ++ M P +F G + + ++ ++++F + ++ E+V +A+ QL+
Sbjct: 17 RQEGADTSRIREFLGMNPSSFTGSSTTEDLENFIEELKKIFDVMHMSDTERVELAAYQLK 76
Query: 915 DEASEW---WESTDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTEL 745
D A W W+ ++++P +W F+ FF R ++E K +EFL K + L V E
Sbjct: 77 DVARTWFDQWKGGRVENAPPASWACFEEAFLGHFFPRELKEVKVREFLTLKQESLSVHEY 136
Query: 744 ATKFNHLLQYAEPKITSEAQKIWYFHEWMS---------------PDINPWMVHHTCSTL 610
+ KF L +YA + ++ F +S DI+ MV+
Sbjct: 137 SLKFTQLSRYAPEMVADMRNRMSLFVAGLSRLSSKEGRAAMLIGDMDISRLMVYVQQVEE 196
Query: 609 EQYVDAAYKLEVTLEESTKRRNRQRSMQGQSQATGF----KRPAPPSNFEKSGKARTE-- 448
E+ D E + K RN +G S + F K PA S + + R E
Sbjct: 197 EKLRDR----EEFRNKRVKTRNESGQQRGNSNRSSFQQRQKGPATSSARAPAPRYRGEHN 252
Query: 447 --------MTPV-XXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQF 295
+TP C CG H +C + + CF CG+EGH +
Sbjct: 253 VQNSKDFKVTPAQSSGSVVRGGSSFPACAKCGRV-HPG-KCRQGQTCCFRCGQEGHFMKE 310
Query: 294 CRLGKQT----GTESQQGSVNQNTRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLY 127
C KQ+ G+ +Q S+ +P M + A + +GG RLY
Sbjct: 311 CPKNKQSSEKLGSRAQSSSI------------SPPDRMASRG-----ATSSTGGGANRLY 353
Query: 126 EMREA-DKPNAP-VAQGTLYLHSTSVCILFDSGATHSFIS 13
+ ++ N+P V G + + +V L D GA+ SF++
Sbjct: 354 AITSRHEQENSPNVVTGMIKVFVFNVYALLDPGASLSFVT 393
>emb|CAD41297.2| OSJNBa0020J04.2 [Oryza sativa Japonica Group]
Length = 1537
Score = 101 bits (251), Expect = 9e-19
Identities = 94/349 (26%), Positives = 144/349 (41%), Gaps = 20/349 (5%)
Frame = -3
Query: 999 WFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWES---TDLDDSPVLNWGMFKAKMTD 829
W +E+ V E ++V A QL AS+WW++ +D+ W F A +
Sbjct: 6 WLRIIEKKLTLVRVRETDKVIFAVNQLEGPASDWWDTYKEARENDAGEPTWEEFTAAFRE 65
Query: 828 RFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLLQYAEPKITSEAQKIWYFHEWMSPD 649
F A+ K EF + + V E KF L +YA + E +KI F E ++ +
Sbjct: 66 NFVPAAVMRMKKNEFRWLRQGNTTVQEYLNKFTQLARYAIGDLADEEEKIDKFIEGLNDE 125
Query: 648 INPWMVHHTCSTLEQYVDAAYKLEV---TLEESTKRR---NRQRSMQGQ----SQATGFK 499
+ M+ + + ++ +LE T+E + KRR +R + Q + ++G+K
Sbjct: 126 LRGPMIGQDHESFQSLINKVVRLENDQRTVEHNRKRRLAMSRLPQIVPQRLKGATSSGWK 185
Query: 498 -------RPAPPSNFEKSGKARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNIECPKEK 340
RPA PSNF + A TP CFNCG YGH CP +
Sbjct: 186 PPIVATNRPAAPSNFNRP-VAIQNRTPTPTLAAPGAKMNVN-CFNCGGYGHYANNCPHPR 243
Query: 339 KSCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETPSPSMQTTAQNKGKAP 160
K+ +TGT + +V T P +P TA G+
Sbjct: 244 KT----------------PVRTGTNAM--TVRGTTTPVTGRGLFKTPQSNRTATGLGR-- 283
Query: 159 AVSGGQGQRLYEMREADKPNAPVAQGTLYLHSTSVCILFDSGATHSFIS 13
GQ + E + + + G ++ST V +LFDSGA+HSFIS
Sbjct: 284 ------GQVNHVRAEEAQEDQGILMGMFSINSTPVKVLFDSGASHSFIS 326
>gb|EOY16854.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 737
Score = 100 bits (250), Expect = 1e-18
Identities = 100/424 (23%), Positives = 172/424 (40%), Gaps = 38/424 (8%)
Frame = -3
Query: 1170 RGVSVPPEVPRDEEQESFAPKEGVIRNRGEYGRALKVVNSMRPGNFDGKGESVKVAHWFS 991
R V P V + A + RG +L ++P F G S K +
Sbjct: 97 RVVEGRPTVQESPSSQGQADHQHHEEERGHLDISLPDFLKLKPPTFSGSDASEKPQVFLD 156
Query: 990 HMERLFHNVEFTEAEQVHIASLQLRDEASEWWESTDLD---DSPVLNWGMFKAKMTDRFF 820
+E++ + + V + + QL D A EW+ S ++ L W F DRF
Sbjct: 157 KVEKICKALGCSSVRSVELTAFQLEDVAQEWYSSLCRGRPTNATPLAWSEFSVAFLDRFL 216
Query: 819 SRAMREEKHKEF-LYPKTDGLKVTELATKFNHLLQYAEPKITSEAQKIWYFHEWMSPDIN 643
++R + +EF +T + ++E KF L +YA ++++ KI F + + +
Sbjct: 217 PLSVRNARAREFETLVQTSSMTMSEYDIKFTQLARYAPYLVSTKEMKIQRFVDGLVEPLF 276
Query: 642 PWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNR-----------QRSMQGQSQATGFKR 496
+ +T VD A ++E+ ES R+R +R G ++ +
Sbjct: 277 RAVASRDFTTYSAAVDRAQRIEMRTSESRAARDRAKRGKTEGYQGRRDFSGGGSSSSRQG 336
Query: 495 PAPPSNFEKSGK------ARTEMTPVXXXXXXXXXXXXXQCFNCGAYGHKNI-ECPKEKK 337
P S + G R +C YG ++ C K
Sbjct: 337 PQRDSRLPQQGSDAPGANIRVGQRTFSSRRQQDSRQSSQVIRSCDTYGRRHSGRCFLTTK 396
Query: 336 SCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETPSPSMQTTAQNKGKA-- 163
+C+ CG+ GH+++ C + Q+ +S +GS T+P S + + ++G+
Sbjct: 397 TCYRCGQPGHIRRDCPMAHQS-PDSARGS----TQPASSAPSVTVSSGREVSGSRGRGAG 451
Query: 162 ------PAVSG-----GQGQ-RLYEM--READKPNAPVAQGTLYLHSTSVCILFDSGATH 25
P+ SG G+GQ R++ + +EA NA V G L + + + +LFD GATH
Sbjct: 452 TSSQGRPSGSGHQSSIGRGQARVFALTQQEAQTSNA-VVSGILSVCNINARVLFDPGATH 510
Query: 24 SFIS 13
SFIS
Sbjct: 511 SFIS 514
>gb|AAX94938.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77550206|gb|ABA93003.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1436
Score = 100 bits (250), Expect = 1e-18
Identities = 99/381 (25%), Positives = 152/381 (39%), Gaps = 20/381 (5%)
Frame = -3
Query: 1095 RNRGEYGRALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLR 916
R R +G ++ +P F E ++ W +E+ V EA++V A QL
Sbjct: 43 RGRSSFGEFMRT----KPPTFTTADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLE 98
Query: 915 DEASEWWES---TDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTEL 745
A + W++ +D+ W F A + F A+ K EF + V E
Sbjct: 99 GPAGDRWDTYKEAREEDAGEPTWEEFTAAFQENFVPAAVMRMKKNEFRRMRQGNTTVQEY 158
Query: 744 ATKFNHLLQYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEV--- 574
+F L +YA + E +KI F E ++ ++ M+ + + ++ +LE
Sbjct: 159 LNRFTQLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQR 218
Query: 573 TLEESTKRR-NRQRSMQGQSQ------ATGFK-------RPAPPSNFEKSGKARTEMTPV 436
T+E + KRR R QG Q ++G+K RPA PSNF + + TP
Sbjct: 219 TVEHNHKRRLAMNRPPQGVPQRLKGATSSGWKPPIVAPNRPAAPSNFNRPVVIQNR-TPT 277
Query: 435 XXXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQ 256
CFNCG YGH CP +K+ +TG +
Sbjct: 278 PTLAAPGAKKNVD-CFNCGEYGHYANNCPHPRKT----------------PVRTGANAM- 319
Query: 255 GSVNQNTRPKFKPAETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGTL 76
+V T P +P T A G+GQ + E + + V G
Sbjct: 320 -TVRGTTTPAAGRGLFKTPQTNRT--------ATGFGRGQVNHVRAEEAQEDQGVLMGMF 370
Query: 75 YLHSTSVCILFDSGATHSFIS 13
++ST V +LFDSGA+HSFIS
Sbjct: 371 SINSTPVKVLFDSGASHSFIS 391
>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1470
Score = 100 bits (249), Expect = 1e-18
Identities = 102/382 (26%), Positives = 149/382 (39%), Gaps = 22/382 (5%)
Frame = -3
Query: 1092 NRGEYGRALKVVNSMRPGNFDGKGESVKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRD 913
NRG G + +P F E ++ W +E+ V EA++V A QL
Sbjct: 42 NRG--GSSFGEFMRTKPPTFATADEPMEAEDWLRIIEKKLTLVRVREADKVIFAVNQLEG 99
Query: 912 EASEWWES---TDLDDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELA 742
A +WW++ D + W F A + F A+ K EF + V E
Sbjct: 100 PAGDWWDTYKEAREDGAGEPTWEEFTAAFRENFVPTAVMRMKKNEFRRLRQGNTTVQEYL 159
Query: 741 TKFNHLLQYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLE---VT 571
KF L +YA + E +KI F E ++ ++ M+ + + ++ +LE T
Sbjct: 160 NKFTQLARYAIGDLADEEEKIDKFIEGLNDELRGPMIGQDHESFQSLINKVVRLENDQRT 219
Query: 570 LEESTKRR-NRQRSMQGQSQ------ATGFK-------RPAPPSNFEKSGKARTEMTPVX 433
+E + KRR R Q Q +G+K RPA SNF + A TP
Sbjct: 220 VEHNRKRRLAMSRPPQTMPQRLKGATPSGWKPPVMVTNRPAALSNFNRP-VALQNRTPT- 277
Query: 432 XXXXXXXXXXXXQCFNCGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQG 253
CFNCG YGH CP +K+ +TG +
Sbjct: 278 PTLAAPGAKKNVDCFNCGKYGHYANNCPHPRKT----------------PVRTGANAM-- 319
Query: 252 SVNQNTRPKFKPA--ETPSPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNAPVAQGT 79
+V T P +TP P+ TT +G+ V + Q + V G
Sbjct: 320 TVRGTTTPAVGRGLFKTPQPNRTTTGFGRGQVNHVRAEEAQE----------DQGVLMGM 369
Query: 78 LYLHSTSVCILFDSGATHSFIS 13
L+ST + +LFDSGA HSFIS
Sbjct: 370 FSLNSTPIKVLFDSGALHSFIS 391
>gb|ADN33767.1| gag protease polyprotein [Cucumis melo subsp. melo]
Length = 871
Score = 100 bits (249), Expect = 1e-18
Identities = 94/365 (25%), Positives = 146/365 (40%), Gaps = 13/365 (3%)
Frame = -3
Query: 1068 LKVVNSMRPGNFDGKGES-VKVAHWFSHMERLFHNVEFTEAEQVHIASLQLRDEASEWWE 892
L+ P FDG E + W S +E +F ++ E ++V A L D + WWE
Sbjct: 332 LRDFRKYNPTTFDGSLEDPTRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWE 391
Query: 891 STDL---DDSPVLNWGMFKAKMTDRFFSRAMREEKHKEFLYPKTDGLKVTELATKFNHLL 721
+T+ D + W FK +FFS ++R+ K +EFL + + V + +F+ L
Sbjct: 392 TTERMLGGDVSQITWQQFKESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLS 451
Query: 720 QYAEPKITSEAQKIWYFHEWMSPDINPWMVHHTCSTLEQYVDAAYKLEVTLEESTKRRNR 541
++A I +EA + F + DI + +T + DA L + ++ S + R
Sbjct: 452 RFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPAT---HADA---LRLAVDLSLQERAN 505
Query: 540 QRSMQGQSQATGFKR-------PAPPSNFEKSGKART-EMTPVXXXXXXXXXXXXXQCFN 385
G+ +G KR P P NF G+ R+ + P C
Sbjct: 506 SSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPGGEFRSFQQKPFEAGEAARGKPL---CTT 562
Query: 384 CGAYGHKNIECPKEKKSCFICGREGHLKQFCRLGKQTGTESQQGSVNQNTRPKFKPAETP 205
CG H C ++CF C +EGH C L + TG
Sbjct: 563 CGK--HHLGRCLFGTRTCFKCRQEGHTADRCPL-RPTGI--------------------- 598
Query: 204 SPSMQTTAQNKGKAPAVSGGQGQRLYEMREADKPNA-PVAQGTLYLHSTSVCILFDSGAT 28
AQN+G + G R++ + A V GTL + +LFDSG++
Sbjct: 599 -------AQNQGAGAPLQG----RVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSS 647
Query: 27 HSFIS 13
HSFIS
Sbjct: 648 HSFIS 652