BLASTX nr result
ID: Rheum21_contig00008481
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00008481
(1446 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 382 e-103
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containi... 374 e-101
gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily p... 372 e-100
ref|XP_004229380.1| PREDICTED: pentatricopeptide repeat-containi... 371 e-100
emb|CBI36964.3| unnamed protein product [Vitis vinifera] 366 2e-98
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,... 360 6e-97
ref|XP_002301516.2| pentatricopeptide repeat-containing family p... 354 5e-95
gb|EMJ22677.1| hypothetical protein PRUPE_ppa005037mg [Prunus pe... 352 3e-94
gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linu... 342 2e-91
ref|XP_006480799.1| PREDICTED: pentatricopeptide repeat-containi... 340 9e-91
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi... 339 2e-90
ref|XP_006429067.1| hypothetical protein CICLE_v10011521mg [Citr... 338 3e-90
emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera] 338 3e-90
ref|XP_006307239.1| hypothetical protein CARUB_v10008848mg [Caps... 332 2e-88
ref|XP_002889397.1| pentatricopeptide repeat-containing protein ... 332 2e-88
ref|XP_004288536.1| PREDICTED: pentatricopeptide repeat-containi... 330 7e-88
ref|XP_006396396.1| hypothetical protein EUTSA_v10029427mg [Eutr... 330 9e-88
ref|NP_171739.1| pentatricopeptide repeat-containing protein [Ar... 330 9e-88
gb|AAL38889.1| unknown protein [Arabidopsis thaliana] 328 3e-87
>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02370, mitochondrial-like [Vitis vinifera]
Length = 506
Score = 382 bits (981), Expect = e-103
Identities = 199/444 (44%), Positives = 289/444 (65%), Gaps = 2/444 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
RLY +SA+GATG VAD L+ +++EG ++ K +L C+++LR Y++ H LEI +WM+
Sbjct: 45 RLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMEN 104
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
K S+ D A+RLDL+ KTKG+A AE++F +LS KNL TYG LLNCYC +K+ +KA
Sbjct: 105 RKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKAL 164
Query: 480 ELLKEMEKLNYVS-SLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
L ++M++LN+ S SLTFNNLM+L +R +PE VP L +EMK+R+ +++TY++LMQSY
Sbjct: 165 ALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSY 224
Query: 657 QLLNDMEAVDRTLQEIEKEGKN-CHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
LND+E +R L+EI++E ++ W+ YSNLAAVY+ N+ + +
Sbjct: 225 ARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYV---NARLFEKAELALKKLEEEMG 281
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
D + YHFLIS YA I NL+EVNR+W SLKS F T+N+SY MLQAL L +D L
Sbjct: 282 FHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKI 341
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFL 1193
F+EW+S +D R+ ++ + +L + I +AE + +AV++S F ++ +AH L
Sbjct: 342 CFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHL 401
Query: 1194 GKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXX 1373
REI AL+++EA A +K ++WQP+ ER+ F KYF EEKDV+GAE
Sbjct: 402 KVREIDTALKYMEAAASEVK-NNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISG 460
Query: 1374 VESKSYLWLLRTYVAAEETAPGMR 1445
++S +Y LL+T VAA T P MR
Sbjct: 461 LDSNAYQLLLQTXVAAGRTEPEMR 484
>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
gi|449518825|ref|XP_004166436.1| PREDICTED:
pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Cucumis sativus]
Length = 474
Score = 374 bits (960), Expect = e-101
Identities = 193/442 (43%), Positives = 278/442 (62%), Gaps = 1/442 (0%)
Frame = +3
Query: 123 LYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKM 302
LY +SA+GATG VA ++ ++ EG++V+K +L C+++LR Y+R+HHCL+I EWM+
Sbjct: 11 LYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETR 70
Query: 303 KHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAAE 482
K N S D ALRLDLI K G+ AEK+F L KN TYGALLNCYC + + +KA
Sbjct: 71 KINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKALT 130
Query: 483 LLKEMEKLNYVSSLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQL 662
L K+M++L +SL+FNNLMT+ +R + PEKVP L EMK+R F + ++TY++ M S
Sbjct: 131 LFKKMDELKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCAS 190
Query: 663 LNDMEAVDRTLQEIEKEGKN-CHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVR 839
LND+ V+ L+E++ E +N W+ YSNLA+ Y++AG MK+ +
Sbjct: 191 LNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEMKSDK-N 249
Query: 840 DPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYF 1019
D + YH LIS YAS NL+EVNRIW +LKS + T +N+SY+ MLQAL KL ++ L R +
Sbjct: 250 DRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKRTY 309
Query: 1020 KEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGK 1199
KEWES +++D RI + ++ YL+Q+ +A +F DA ++S F + RE+ + +FL
Sbjct: 310 KEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLKL 369
Query: 1200 REISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVE 1379
+++ A HLE+ KE + W PS F YF EEKDV+GAE ++
Sbjct: 370 KQVDSAFSHLESALSESKEKE-WHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLD 428
Query: 1380 SKSYLWLLRTYVAAEETAPGMR 1445
+ Y LL+TYVAA + AP MR
Sbjct: 429 ASGYHLLLKTYVAAGKLAPDMR 450
>ref|XP_006349176.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Solanum tuberosum]
Length = 495
Score = 374 bits (959), Expect = e-101
Identities = 200/444 (45%), Positives = 279/444 (62%), Gaps = 2/444 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
RLYR +SA+GAT V + ++ Y REG VV+K +L C+++LR YKR+ H LEI EWM+K
Sbjct: 33 RLYRRLSALGATKGSVTETINAYTREGRVVKKYELEKCIKELRKYKRYQHALEIMEWMEK 92
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
N S+ D +RLDLI K +GI AEK+F LS +N TYGALLNCYC +K++DKA
Sbjct: 93 RGINFSYGDYGVRLDLIAKVQGITAAEKYFGGLSPSMQNQSTYGALLNCYCVEKMADKAL 152
Query: 480 ELLKEMEKLNYVS-SLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
++M++L + + SL FNNLM+L +R +PEKV L +EMK R P+ +++Y++ M SY
Sbjct: 153 SFFEKMDQLKFTNKSLAFNNLMSLYMRLGQPEKVAPLVQEMKSRKVPLCTFSYNIWMNSY 212
Query: 657 QLLNDMEAVDRTLQEIEKE-GKNCHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
L+D+E V+R +E+++E K C W+ YSNLA Y++AG++ M
Sbjct: 213 SCLDDIEGVERVFEELKQENAKECDWTTYSNLAVAYVKAGHNEKAELALKKLEEEM---G 269
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
R+ YH+LIS +A I NL EV RIW SLKS T N SY+ MLQ+L K +D L +
Sbjct: 270 PRNRQAYHYLISLHARISNLGEVYRIWGSLKSSLDLT-NSSYLVMLQSLSKHNDMDGLKK 328
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFL 1193
Y++EWES YD R+ + V+ YLR + + AEKVF+ A+++S F E+ + +L
Sbjct: 329 YYEEWESSCSTYDMRLANNVIGAYLRHDMLNNAEKVFHSALKRSQGPFFLAWEMFMLFYL 388
Query: 1194 GKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXX 1373
KR+I+ A + +EA+A IKE +KW+P E I +F +YFVEEKDVDGAE
Sbjct: 389 RKRQINFAQQCMEAIASRIKE-NKWRPKYETISNFLEYFVEEKDVDGAEDFYKFLKKVNC 447
Query: 1374 VESKSYLWLLRTYVAAEETAPGMR 1445
+ S Y LLRTY AA T MR
Sbjct: 448 LSSDVYSSLLRTYAAANRTTDDMR 471
>gb|EOX95289.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 501
Score = 372 bits (955), Expect = e-100
Identities = 204/483 (42%), Positives = 296/483 (61%), Gaps = 2/483 (0%)
Frame = +3
Query: 3 LRGFCAATSLQAETAVEAVEHASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLD 182
+R C ATS +A+ A+ A S + RLY +SA+ ATG V++ L+
Sbjct: 14 VRKLCTATSEKAKIK------AAVAAASPMRN-------RLYPRLSALAATGGTVSEALN 60
Query: 183 GYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTK 362
++ EG +RKD+L CV++LR Y+R+ H L+I +WM++ + SH D+A+RLDLI KTK
Sbjct: 61 DFIMEGKKIRKDELGRCVKELRKYRRYQHALDIMDWMERRNLHLSHVDHAIRLDLIAKTK 120
Query: 363 GIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAAELLKEMEKLNYV-SSLTFNNL 539
GI AE + +L KN TYGALLNCYC + + DKA+ L ++M++L + ++L FNNL
Sbjct: 121 GIDAAENYLSALPPSAKNQLTYGALLNCYCNNLMKDKASSLFQKMDELRFTNNTLPFNNL 180
Query: 540 MTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGK 719
M L +R +PEKVP L +E+K RN P +TY + MQSY LND+E V+R L+E+ ++ +
Sbjct: 181 MCLYMRLGQPEKVPELVDELKLRNIPRCRFTYVVWMQSYANLNDIEGVERVLEELAQDSE 240
Query: 720 N-CHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNLA 896
+ C W+ Y+NLAA+Y++AG K++ R YHFLIS YA NLA
Sbjct: 241 DKCTWTTYNNLAAIYVKAG---LFEKAEACLKKLEKDMMPRQREAYHFLISLYAGTSNLA 297
Query: 897 EVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLVM 1076
EV+R+WE+LK F T +N SY+ M+QAL KL L+ L + F EWES YD R+ + +
Sbjct: 298 EVHRVWEALKRAFSTVTNTSYLVMVQALAKLKDLEGLKKCFAEWESSCSAYDIRLATSTI 357
Query: 1077 AGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLEAVADAIKE 1256
GYL + + EAE V +A+++S F K RE+ + +FL K + AL+H+EAV + E
Sbjct: 358 RGYLSGDLLEEAELVLGNAMKRSKGPFHKVRELFMVYFLEKCQFDLALQHVEAV---VSE 414
Query: 1257 TDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETAP 1436
W+P+ E I F YF++E+DVD AE ++S +Y LL+TYVAA + AP
Sbjct: 415 MGDWRPAPETITAFFDYFMKERDVDAAEEFCRILKSKNGLDSNAYHLLLKTYVAAGKVAP 474
Query: 1437 GMR 1445
MR
Sbjct: 475 DMR 477
>ref|XP_004229380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Solanum lycopersicum]
Length = 495
Score = 371 bits (953), Expect = e-100
Identities = 200/444 (45%), Positives = 279/444 (62%), Gaps = 2/444 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
RLYR +SA+GAT V + ++ Y REG VV+K +L C+++LR YKR+ H LEI EWM+K
Sbjct: 33 RLYRRLSALGATKGSVTETINAYTREGRVVKKYELEKCIKELRKYKRYQHALEIMEWMEK 92
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
N S+ D +RLDLI K +GI AEK+F SLS +N TYGALLNCYC +K++DKA
Sbjct: 93 RGINFSYGDYGVRLDLIAKVQGITAAEKYFGSLSPSMQNQSTYGALLNCYCVEKMTDKAL 152
Query: 480 ELLKEMEKLNYVS-SLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
+ M++L + + SL FNNLM+L +R +PEKV L +EMK R P+ +++Y++ M SY
Sbjct: 153 TFFERMDQLKFTNRSLAFNNLMSLYMRLGQPEKVAPLVQEMKSRKVPLCTFSYNVWMNSY 212
Query: 657 QLLNDMEAVDRTLQEIEKE-GKNCHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
L+D+E V+R +E+++E K C W+ YSNLA Y++AG++ M
Sbjct: 213 SCLDDIEGVERVFEELKQENAKECDWTTYSNLAVAYVKAGHNEKAELALKKLEEEM---G 269
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
R+ YH+LIS +A I NL EV RIW SLKS T N SY+ MLQ+L K +D L +
Sbjct: 270 PRNRQAYHYLISLHARISNLGEVYRIWGSLKSSLDLT-NSSYLVMLQSLSKHNDMDGLKK 328
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFL 1193
Y++EWES YD R+ + V+ YLR + + AEKVF+ A+++S F E+ + +L
Sbjct: 329 YYEEWESSCSTYDMRLANNVIGAYLRHDMLNNAEKVFHCALKRSQGPFFLAWEMFMLFYL 388
Query: 1194 GKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXX 1373
KR+I+ A + +EA+A IKE +KW+P E I +F +YFVEEKDVDGAE
Sbjct: 389 RKRQINFAQQCMEAIASRIKE-NKWRPKYETISNFLEYFVEEKDVDGAEEFYKFLKKVNC 447
Query: 1374 VESKSYLWLLRTYVAAEETAPGMR 1445
+ S Y LLRTY AA T M+
Sbjct: 448 LSSDVYNSLLRTYAAANRTTDDMK 471
>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 366 bits (939), Expect = 2e-98
Identities = 187/409 (45%), Positives = 273/409 (66%), Gaps = 2/409 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
RLY +SA+GATG VAD L+ +++EG ++ K +L C+++LR Y++ H LEI +WM+
Sbjct: 84 RLYHRLSALGATGGSVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMEN 143
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
K S+ D A+RLDL+ KTKG+A AE++F +LS KNL TYG LLNCYC +K+ +KA
Sbjct: 144 RKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEKAL 203
Query: 480 ELLKEMEKLNYVS-SLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
L ++M++LN+ S SLTFNNLM+L +R +PE VP L +EMK+R+ +++TY++LMQSY
Sbjct: 204 ALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQSY 263
Query: 657 QLLNDMEAVDRTLQEIEKEGKN-CHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
LND+E +R L+EI++E ++ W+ YSNLAAVY+ N+ + +
Sbjct: 264 ARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYV---NARLFEKAELALKKLEEEMG 320
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
D + YHFLIS YA I NL+EVNR+W SLKS F T+N+SY MLQAL L +D L
Sbjct: 321 FHDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDGLKI 380
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFL 1193
F+EW+S +D R+ ++ + +L + I +AE + +AV++S F ++ +AH L
Sbjct: 381 CFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHL 440
Query: 1194 GKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAE 1340
REI AL+++EA A +K ++WQP+ ER+ F KYF EEKDV+GAE
Sbjct: 441 KVREIDTALKYMEAAASEVK-NNEWQPAPERVLAFLKYFEEEKDVEGAE 488
>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 504
Score = 360 bits (925), Expect = 6e-97
Identities = 197/450 (43%), Positives = 278/450 (61%), Gaps = 8/450 (1%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
+LY +SA+GATG V+ L+ ++ EG + K +L C+R+LR Y+R H EI EWM+K
Sbjct: 39 KLYHKLSALGATGGSVSRTLNEHIMEGKTITKIELSRCIRELRKYRRFDHAFEIMEWMEK 98
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYT-YGALLNCYCTDKLSDKA 476
K N S+ D A+RLDLI K +GIA AE +F LS KN +T YGALLNCYC + +SDKA
Sbjct: 99 RKMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSDKA 158
Query: 477 AELLKEMEKLNYV-SSLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQS 653
L +EM++ ++ SSL FNNLM++ +R +PEKVP L +EMK+R S+TY++ MQS
Sbjct: 159 LALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWMQS 218
Query: 654 YQLLNDMEAVDRTLQEIEKEG--KNCHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKN 827
Y LND + VDR L+EI +G N W+ YSNLA +Y++AG ++K
Sbjct: 219 YGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAG-------IFEKAESALKK 271
Query: 828 LRV----RDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQ 995
L R+ YHFLIS YA GN EVNR+W LKS F +N+SY+ MLQAL KL
Sbjct: 272 LEAIMGFRNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKD 331
Query: 996 LDELVRYFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREI 1175
++ + + F+EWESG +YD RI ++ + +L+ + EAE +F+DA++++ F K RE
Sbjct: 332 VEGVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARER 391
Query: 1176 LIAHFLGKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXX 1355
+ FL ++ AL+H+ A A + E +W+P +E + + YF EKDVDGAE
Sbjct: 392 FMLFFLKIHQLDLALKHMRA-AFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKI 450
Query: 1356 XXXXXXVESKSYLWLLRTYVAAEETAPGMR 1445
+ S Y LL+TY+AA + AP MR
Sbjct: 451 LKHINCLNSSVYSLLLKTYIAAGKLAPEMR 480
>ref|XP_002301516.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550345391|gb|EEE80789.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 511
Score = 354 bits (909), Expect = 5e-95
Identities = 194/484 (40%), Positives = 281/484 (58%), Gaps = 16/484 (3%)
Frame = +3
Query: 42 TAVEAVEH----ASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLDGYVREGHVV 209
T AV H A + V+A+K R+YR +S +GA+G V+ L+ + EG
Sbjct: 11 TGSRAVRHLCVAAEAVPVAAEKRK------RMYRRLSELGASGGSVSKTLNELILEGGKT 64
Query: 210 RKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAEAEKFF 389
K +L C++KLR Y R H +E+ EWM K K N SH D+A+ LDL KTKGIA AE +F
Sbjct: 65 SKINLTTCIKKLRKYGRFDHAIEVMEWMQKRKMNFSHVDHAVYLDLTAKTKGIAAAENYF 124
Query: 390 ESLSAENKNLYTYGALLNCYCTDKLSDKAAELLKEMEKLNYVS-SLTFNNLMTLALRSEE 566
++L +N TY LLNCYC +++S+KA L ++M+K+ +S S+ F+NLMTL +R +
Sbjct: 125 DNLPPSVQNHVTYSTLLNCYCKERMSEKALTLFEKMDKMKLLSTSMPFSNLMTLHMRLGQ 184
Query: 567 PEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGK-NCHWSVYS 743
PEKV + +EMK+R ++TY++ MQSY LND E V R L E++ +GK N W+ YS
Sbjct: 185 PEKVLDIVQEMKQRGVSPGTFTYNIWMQSYGCLNDFEGVQRVLDEMKTDGKENFSWTTYS 244
Query: 744 NLAAVYIRAG----------NSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNL 893
NLA +Y++AG K D YHFLIS YA NL
Sbjct: 245 NLATIYVKAGLFDKAESALRKLEEQIECGRDCDFQKKRRHDADREAYHFLISLYAGTSNL 304
Query: 894 AEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLV 1073
+EV+R+W SLKS F+TT+N+SY+ +LQAL KL ++ L++ FKEWES YD R+ ++
Sbjct: 305 SEVHRVWNSLKSSFRTTTNISYLNVLQALAKLKDVEGLLKCFKEWESSCHSYDMRLANVA 364
Query: 1074 MAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLEAVADAIK 1253
+ L + EA +F++A++++ F K RE+ + FL + AL+H++A K
Sbjct: 365 IRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLKNHQPDLALKHMKAAFSEAK 424
Query: 1254 ETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETA 1433
E + WQP ++ + F YF + KDVDGAE + S +Y+ LL+TY AA A
Sbjct: 425 EIE-WQPDQKTVSAFLNYFEDGKDVDGAERLCKIWKQINRLNSNAYILLLKTYTAAGRLA 483
Query: 1434 PGMR 1445
P MR
Sbjct: 484 PEMR 487
>gb|EMJ22677.1| hypothetical protein PRUPE_ppa005037mg [Prunus persica]
Length = 480
Score = 352 bits (902), Expect = 3e-94
Identities = 186/411 (45%), Positives = 259/411 (63%), Gaps = 4/411 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
RLYR +SA+GATG VA L+ Y+ EG +++K +L C+++LR Y++ H LEI EWM+
Sbjct: 37 RLYRRLSALGATGGSVAKTLNQYIMEGKMLKKYELERCIKELRKYRKFQHALEIMEWMEF 96
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
K N S D A+RLDL K KGI AE +F LS K+ +TYGALLNCYC + + +KA
Sbjct: 97 RKMNYSKADFAIRLDLTSKVKGIEAAEDYFSGLSPSLKDRFTYGALLNCYCKELMEEKAL 156
Query: 480 ELLKEMEKLNYV-SSLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
L + M++L + SSL FNNLM++ +R ++PEKV L +EMK+RN P++++TY++ MQS+
Sbjct: 157 ALYETMDELEFASSSLVFNNLMSMHMRKQQPEKVAPLVQEMKQRNIPLDTFTYNIWMQSF 216
Query: 657 QLLNDMEAVDRTLQEIEK-EGKNCHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
LND E +R L E++K +G C WS YSNLAA+Y++A MK L+
Sbjct: 217 ASLNDFEGAERVLDEMQKQDGNQCSWSTYSNLAAIYVKAKIFDKAELALKKSEEMMKPLK 276
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
R+ YHFLIS YA NL EV R+WESLK F T+N+SY+ MLQAL KL ++ L
Sbjct: 277 QRN--TYHFLISLYACTSNLGEVKRVWESLKKAFPATNNMSYLIMLQALCKLNDIEGLKE 334
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFL 1193
F+EWE YD R+ + + GYL Q+ EA VF DA +++ F K RE+ + +FL
Sbjct: 335 CFEEWECKCSSYDMRLANTAIRGYLSQDMYEEAALVFADACKRTKGPFFKAREMFMLYFL 394
Query: 1194 GKREISRALEHLEAVADAIKET--DKWQPSRERIRDFCKYFVEEKDVDGAE 1340
++ A+ +L A A+ ET +W PS + F KYF EEKDV+ AE
Sbjct: 395 KNCQVDLAVSYLGA---AVSETADGEWHPSPDTTSAFFKYFEEEKDVESAE 442
>gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
Length = 516
Score = 342 bits (878), Expect = 2e-91
Identities = 193/480 (40%), Positives = 282/480 (58%), Gaps = 9/480 (1%)
Frame = +3
Query: 33 QAETAVEAVEHASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLDGYVREGHVVR 212
Q TA EA AS+ S ++ S RLYR +SA+GATG V VL+ YV +G +R
Sbjct: 18 QLSTATEA--SASAPDPSYKEQRSSGNPLRLYRRLSALGATGGTVDKVLNDYVMDGMSIR 75
Query: 213 KDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAEAEKFFE 392
K +L+ CV++LR Y R +H LEI EWM+K N H D A+RLDLICKTKGI EAE +F
Sbjct: 76 KVELMRCVKELRKYGRFNHGLEIMEWMEKRGINLGHGDLAVRLDLICKTKGITEAENYFN 135
Query: 393 SLSAENKNLYTYGALLNCYCTDKLSDKAAELLKEMEKLNYV-SSLTFNNLMTLALRSEEP 569
L KN TYG+LLN YC S+KA +L ++M+KL + +SL FNNLM++ +R +
Sbjct: 136 GLVPSAKNPATYGSLLNSYCKKLDSEKALQLFQKMDKLKFFRNSLPFNNLMSMYMRLGQQ 195
Query: 570 EKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKE---GKNCHWSVY 740
EKVP L +MK+ N P ++TY++ +QS + D E + + L+E+ + G N +W+ Y
Sbjct: 196 EKVPELVSQMKQMNLPPCTFTYNIWIQSLGHMRDFEGIKKVLEEMRNDVNFGNNFNWTTY 255
Query: 741 SNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNLAEVNRIWES 920
SNLAAVY AG + + D YHFL++ Y I +L EV+R+W
Sbjct: 256 SNLAAVYTSAGE---FERAKLALKMMEERIDSHDRNAYHFLLTLYGGIADLEEVHRVWGC 312
Query: 921 LKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLVMAGYLRQNK 1100
LK+ F +N SY+ MLQAL +L ++ + + F+EWES YD R+ ++ + YL +
Sbjct: 313 LKAKFNQVTNASYLVMLQALARLKDVEGISKVFEEWESVCTSYDMRVANVAIRVYLEKGM 372
Query: 1101 IGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLEAVADAIKETDK----- 1265
EAE VF+ A+E++ + K RE+L+ L +R++ AL+ ++A + + +K
Sbjct: 373 YNEAEAVFDGAMERTPGPYFKTREMLMVSLLKRRQLEPALKQMKAAFTEVGQNEKGHEKE 432
Query: 1266 WQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETAPGMR 1445
W+PS E + F YF EEKDV+GAE +S Y L++TY+AA ++A MR
Sbjct: 433 WRPSAEIVNAFFGYFEEEKDVEGAEKMWKILKCINRCDSTVYRLLMKTYIAAGKSAVDMR 492
>ref|XP_006480799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Citrus sinensis]
Length = 508
Score = 340 bits (872), Expect = 9e-91
Identities = 182/446 (40%), Positives = 273/446 (61%), Gaps = 4/446 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
+LY+ +SA+GATG V L+ Y+ EG VRKD L CVR LR + R+ H LE+ EWM+
Sbjct: 45 KLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES 104
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
K + S+ D A+ LDL KTKGIA AE++F LS KN YTYGALLNCYC + ++++A
Sbjct: 105 RKIHFSYTDFAVYLDLTAKTKGIAAAEEYFNGLSEYAKNRYTYGALLNCYCKELMTERAL 164
Query: 480 ELLKEMEKLNYV-SSLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
L ++M++L ++ +++ FNNL T+ LR +PEKV L +MK+RN +++ TY + MQSY
Sbjct: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
Query: 657 QLLNDMEAVDRTLQEIEKEGKN-CHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
LND++ V+R E+ E ++ C W+ YSNLA++Y++A ++ ++
Sbjct: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA----ELFEKAELALKKLEEMK 280
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
RD YHFLIS Y + NL VNR+W LKS F T N SY+ +LQAL KL +D L +
Sbjct: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSYLVLLQALAKLNAIDILKQ 339
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRA--FCKGREILIAH 1187
F+EWES YD R+ +++ YL+++ EA +FN+A +++ + F K RE + +
Sbjct: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY 399
Query: 1188 FLGKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXX 1367
+L R++ AL +EA K+ W+P + + F ++F EEKDVDGAE
Sbjct: 400 YLRSRQLDLALNEMEAALSEAKQF-HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
Query: 1368 XXVESKSYLWLLRTYVAAEETAPGMR 1445
++ +Y L++TY+AA + A MR
Sbjct: 459 NCLDFSAYSLLIKTYIAAGKLASDMR 484
>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial [Vitis vinifera]
gi|296089781|emb|CBI39600.3| unnamed protein product
[Vitis vinifera]
Length = 498
Score = 339 bits (869), Expect = 2e-90
Identities = 183/460 (39%), Positives = 275/460 (59%), Gaps = 2/460 (0%)
Frame = +3
Query: 69 SSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLR 248
S+A +A K+ S W+L SA+ T VA+ LD +V+EG V++ D++ CV +LR
Sbjct: 21 STATATAAKDKEASLYWKL----SALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLR 76
Query: 249 NYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTY 428
+K++ H +I+EWM+K K++ ++ D A+R+DL+ KT+GIA+AE +F SL K TY
Sbjct: 77 RFKKYKHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTY 136
Query: 429 GALLNCYCTDKLSDKAAELLKEMEKLNYVSS-LTFNNLMTLALRSEEPEKVPGLAEEMKR 605
GALLNCYC + + DKA EL K++++LN+VSS L++NN+++L LR +PEKVP L EM+
Sbjct: 137 GALLNCYCKENMLDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEE 196
Query: 606 RNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGKNCHWSVYSNLAAVYIRAGNSXX 785
++ P + YTY+LLM SY + D EAV++ L +++K G W Y NLA +Y+ AG++
Sbjct: 197 KDIPADLYTYNLLMNSYASVKDFEAVEQVLDKMKKRGVERDWFTYGNLANIYVDAGHTKK 256
Query: 786 XXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMT 965
+N + DP + LI+ YA NL VNR WESLK +N SY+
Sbjct: 257 ANYALQKLE---QNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLI 313
Query: 966 MLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKS 1145
ML AL KLG + L + FKEWESG YD R+ ++++ YL + I EA + ++
Sbjct: 314 MLLALSKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREIIEEANLLSESIAKRG 373
Query: 1146 GRAFCKGREILIAHFLGKREISRALEHLE-AVADAIKETDKWQPSRERIRDFCKYFVEEK 1322
K ++ + +L K ++ A+++L+ + A E +KW P+ E I F +YF E K
Sbjct: 374 PELKLKTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVK 433
Query: 1323 DVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETAPGM 1442
DVD AE ++SK Y LLRTY+AA + P M
Sbjct: 434 DVDSAEKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLM 473
>ref|XP_006429067.1| hypothetical protein CICLE_v10011521mg [Citrus clementina]
gi|557531124|gb|ESR42307.1| hypothetical protein
CICLE_v10011521mg [Citrus clementina]
Length = 508
Score = 338 bits (867), Expect = 3e-90
Identities = 182/446 (40%), Positives = 273/446 (61%), Gaps = 4/446 (0%)
Frame = +3
Query: 120 RLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDK 299
+LY+ +SA+GATG V L+ Y+ EG VRKD L CVR LR + R+ H LE+ EWM+
Sbjct: 45 KLYKRLSALGATGGSVTGALNAYIMEGKTVRKDMLEYCVRSLRKFGRYRHALEVIEWMES 104
Query: 300 MKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAA 479
K + S+ D A+ LDL KTKGIA AE++F SLS KN YTYGALLNCYC + ++++A
Sbjct: 105 RKIHFSYTDFAVYLDLTAKTKGIAAAEEYFNSLSEYAKNRYTYGALLNCYCKELMTERAL 164
Query: 480 ELLKEMEKLNYV-SSLTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSY 656
L ++M++L ++ +++ FNNL T+ LR +PEKV L +MK+RN +++ TY + MQSY
Sbjct: 165 ALFEKMDELKFLGNTVAFNNLSTMYLRLGQPEKVRPLVNQMKQRNISLDNLTYIVWMQSY 224
Query: 657 QLLNDMEAVDRTLQEIEKEGKN-CHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLR 833
LND++ V+R E+ E ++ C W+ YSNLA++Y++A ++ ++
Sbjct: 225 SHLNDIDGVERVFYEMCNECEDKCRWTTYSNLASIYVKA----ELFEKAELALKKLEEMK 280
Query: 834 VRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVR 1013
RD YHFLIS Y + NL VNR+W LKS F T N S + +LQAL KL +D L +
Sbjct: 281 PRDRKAYHFLISLYCNTSNLDAVNRVWGILKSTFPPT-NTSSLVLLQALAKLNAIDILKQ 339
Query: 1014 YFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRA--FCKGREILIAH 1187
F+EWES YD R+ +++ YL+++ EA +FN+A +++ + F K RE + +
Sbjct: 340 CFEEWESRCSSYDMRLADVIIRAYLQKDMYEEAALIFNNAKKRANASARFFKSRESFMIY 399
Query: 1188 FLGKREISRALEHLEAVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXX 1367
+L R++ AL +EA K+ W+P + + F ++F EEKDVDGAE
Sbjct: 400 YLRSRQLDLALNEMEAALSEAKQF-HWRPMQVTVDTFFRFFEEEKDVDGAEEFCKVLKSL 458
Query: 1368 XXVESKSYLWLLRTYVAAEETAPGMR 1445
++ +Y L++TY+AA + A MR
Sbjct: 459 NCLDFSAYSLLIKTYIAAGKLASDMR 484
>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
Length = 494
Score = 338 bits (867), Expect = 3e-90
Identities = 181/455 (39%), Positives = 273/455 (60%), Gaps = 2/455 (0%)
Frame = +3
Query: 84 SADKEDSMSTMWRLYRGISAIGATGDKVADVLDGYVREGHVVRKDDLLDCVRKLRNYKRH 263
+A K+ S W+L SA+ T VA+ LD +V+EG V++ D++ CV +LR +K++
Sbjct: 22 TATKDKEASLYWKL----SALRGTEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKY 77
Query: 264 HHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAEAEKFFESLSAENKNLYTYGALLN 443
H +I+EWM+K K++ ++ D A+R+DL+ KT+GIA+AE +F SL K TYGALLN
Sbjct: 78 KHAAQIYEWMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLN 137
Query: 444 CYCTDKLSDKAAELLKEMEKLNYVSS-LTFNNLMTLALRSEEPEKVPGLAEEMKRRNFPM 620
CYC + + DKA EL K++++LN+VSS L++NN+++L LR +PEKVP L EM+ ++ P
Sbjct: 138 CYCKENMVDKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPA 197
Query: 621 NSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGKNCHWSVYSNLAAVYIRAGNSXXXXXXX 800
+ YTY+LLM SY + D EAV++ L++++K G W Y NLA +Y+ AG++
Sbjct: 198 DLYTYNLLMNSYASVKDFEAVEQVLEKMKKRGVERDWFTYGNLANIYVDAGHTKKANYAL 257
Query: 801 XXXXXSMKNLRVRDPVPYHFLISFYASIGNLAEVNRIWESLKSDFKTTSNVSYMTMLQAL 980
+N + DP + LI+ YA NL VNR WESLK +N SY+ ML AL
Sbjct: 258 QKLE---QNKNLHDPEAFRMLINLYARTSNLEGVNRAWESLKLAHPKINNKSYLIMLLAL 314
Query: 981 LKLGQLDELVRYFKEWESGYKHYDSRIPSLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFC 1160
KLG + L + FKEWESG YD R+ ++++ YL + I EA + ++
Sbjct: 315 SKLGDVAGLEKCFKEWESGCSTYDVRLSNVMLESYLNREMIEEANLLSESIAKRGPELKL 374
Query: 1161 KGREILIAHFLGKREISRALEHLE-AVADAIKETDKWQPSRERIRDFCKYFVEEKDVDGA 1337
K ++ + +L K ++ A+++L+ + A E +KW P+ E I F +YF E KDVD A
Sbjct: 375 KTLDLFMKFYLKKHQLDLAMKYLDMGASKADPENNKWFPTEETITMFLEYFEEVKDVDSA 434
Query: 1338 EXXXXXXXXXXXVESKSYLWLLRTYVAAEETAPGM 1442
E ++SK Y LLRTY+AA + P M
Sbjct: 435 EKFCETMRKISRLDSKIYDSLLRTYIAAGKEEPLM 469
>ref|XP_006307239.1| hypothetical protein CARUB_v10008848mg [Capsella rubella]
gi|482575950|gb|EOA40137.1| hypothetical protein
CARUB_v10008848mg [Capsella rubella]
Length = 523
Score = 332 bits (852), Expect = 2e-88
Identities = 197/487 (40%), Positives = 283/487 (58%), Gaps = 9/487 (1%)
Frame = +3
Query: 12 FCA-ATSLQAETAVEAVEHASSA--GV--SADKEDSMSTMWRLYRGISAIGATGDKVADV 176
FCA A S A VEA A +A GV S + S LY+ +S + TG VA+
Sbjct: 17 FCATAVSPAATNGVEASVFAPAAANGVQGSVSAPTAASRQRELYKKLSKLNVTGGTVAET 76
Query: 177 LDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICK 356
L+ ++ EG VRKDDL C + LR ++RH H LEIF+WM+K K S D+A+RLDLI K
Sbjct: 77 LNQFIMEGVTVRKDDLFRCAKDLRKFRRHQHALEIFDWMEKRKMTLSVSDHAIRLDLIGK 136
Query: 357 TKGIAEAEKFFESLSAENKNLY-TYGALLNCYCTDKLSDKAAELLKEMEKLNYVS-SLTF 530
TKG+ EAE +F +L KN TYGAL+NCYC +KA ++M++L + + SL F
Sbjct: 137 TKGLEEAENYFNNLDPSVKNHQSTYGALMNCYCVVLEEEKAKAHFEKMDELKFANNSLPF 196
Query: 531 NNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEK 710
NN+M++ +R +PEKVP L EMK+R+ + TYS+ MQS LND++ +++ + E+ K
Sbjct: 197 NNMMSMYMRLGQPEKVPVLVNEMKQRDISPSGVTYSIWMQSCGSLNDLDGLEKIIDEMGK 256
Query: 711 EGK-NCHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIG 887
+ + W+ +SNLAA+Y +AG M N RD +HFLIS YA I
Sbjct: 257 DSEAKTTWNTFSNLAAIYTKAGLYEKAESALKSMEEKM-NPNYRDS--HHFLISLYAGIS 313
Query: 888 NLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPS 1067
EV R+WE LK +N+SY+ MLQA+ KLG LD + + F EWES YD R+ +
Sbjct: 314 KAPEVFRVWELLKKARPEVNNMSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLAN 373
Query: 1068 LVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLE-AVAD 1244
+ + YL+ N EAEK+ + A++KS F K R++L+ H L + A++HLE AV+D
Sbjct: 374 IAINTYLKGNMHEEAEKILDGAMKKSKGPFSKARQLLMIHLLQNGKADLAMKHLEAAVSD 433
Query: 1245 AIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAE 1424
+ + D+W S E + F +F KDV+GAE +S + +L++TY A+
Sbjct: 434 STENKDEWSWSSELVSLFYLHFENAKDVNGAEEFSRILSKWRPFDSDTATFLIKTYAASG 493
Query: 1425 ETAPGMR 1445
+T P MR
Sbjct: 494 KTRPDMR 500
>ref|XP_002889397.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335239|gb|EFH65656.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 524
Score = 332 bits (851), Expect = 2e-88
Identities = 191/488 (39%), Positives = 277/488 (56%), Gaps = 10/488 (2%)
Frame = +3
Query: 12 FCAATSLQA------ETAVEAVEHASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVAD 173
FCA A E +V + A+ S + S LY+ +S + G VA+
Sbjct: 17 FCATVFAPASATGVVEASVSSPAAANGVEASVPAPTAASRQRELYKKLSKLSVAGGTVAE 76
Query: 174 VLDGYVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLIC 353
L+ ++ EG VRK DL C + LR ++RH H LEIF+WM+K K S D+A+RLDLI
Sbjct: 77 TLNQFIMEGITVRKVDLFRCAKDLRKFRRHQHALEIFDWMEKRKMTFSVSDHAIRLDLIA 136
Query: 354 KTKGIAEAEKFFESLSAENKNLY-TYGALLNCYCTDKLSDKAAELLKEMEKLNYVS-SLT 527
K KG+ AE +F +L KN TYGAL+NCYC + KA ++M++LN+V+ SL
Sbjct: 137 KAKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEGKAKAHFEKMDELNFVNNSLP 196
Query: 528 FNNLMTLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIE 707
FNN+M++ +R +PEKVP L + MK+R TYS+ MQS LND++ +++ + E+
Sbjct: 197 FNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMG 256
Query: 708 KEGK-NCHWSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASI 884
K+ + W+ +SNLAA++ +AG M N RD +HFLIS YA I
Sbjct: 257 KDSEAKTTWNTFSNLAAIFTKAGLYEKAESALKSMEKKM-NPNNRDS--HHFLISLYAGI 313
Query: 885 GNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIP 1064
EV R+WESLK +N+SY+ MLQA+ KLG +D + + F EWES YD R+
Sbjct: 314 SKGTEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDIDGIKKIFTEWESKCWAYDMRLA 373
Query: 1065 SLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLE-AVA 1241
++ + YL+ N EAEK+ + A+EKS F K R++L+ H L + A++HLE AV+
Sbjct: 374 NIAINTYLKGNMYEEAEKILDGAMEKSKGPFSKARQLLMIHLLENGKADLAMKHLETAVS 433
Query: 1242 DAIKETDKWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAA 1421
D + D+W S E + F +F KDVDGAE V+ ++ +L++TY AA
Sbjct: 434 DPAENKDEWSWSSELVSLFFLHFKRAKDVDGAEDFCKILSNWKPVDCETMSFLIKTYAAA 493
Query: 1422 EETAPGMR 1445
E+T P MR
Sbjct: 494 EKTCPDMR 501
>ref|XP_004288536.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 446
Score = 330 bits (847), Expect = 7e-88
Identities = 181/418 (43%), Positives = 255/418 (61%), Gaps = 4/418 (0%)
Frame = +3
Query: 195 EGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAE 374
EG ++K +L CV++LR Y++ LEI EWM+ K N S D A+RLDL K KGI
Sbjct: 2 EGRKIQKYELDRCVKELRKYRQFQTALEIMEWMEFRKINYSLPDYAVRLDLTAKAKGIEA 61
Query: 375 AEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAAELLKEMEKLNYV-SSLTFNNLMTLA 551
AE +F +L KN TYG+LLNCYC + + +KA L K+M++LNYV S+L FNNLM L
Sbjct: 62 AESYFSNLPQSAKNKLTYGSLLNCYCKEVMEEKALALYKKMDELNYVDSALVFNNLMALY 121
Query: 552 LRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGKN-CH 728
+R ++PEKV EEMKRR +++++Y++ MQSY LNDM+ V+ ++E++ + ++ C
Sbjct: 122 MRKKQPEKVAPFVEEMKRREIRLDTFSYNIWMQSYASLNDMKGVESVVEEMQSQDEDECD 181
Query: 729 WSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNLAEVNR 908
WS YSNLA++Y++A M + + + YHFLI+ YA+ GNL EV R
Sbjct: 182 WSTYSNLASIYVKAQLYEKAEVALKLSEKVMMSGKPQRQT-YHFLITLYANTGNLGEVKR 240
Query: 909 IWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLVMAGYL 1088
IWESLK F T+N+SY+ ++QAL KL ++ L F+EW+S YD R+ ++V+ YL
Sbjct: 241 IWESLKLAFPDTNNISYLLVVQALCKLKDVEGLKECFEEWQSNCSSYDMRLANVVIRAYL 300
Query: 1089 RQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLEAVADAIKET--D 1262
QN EA +F DA ++ F K REI +A+FL R+ A+ +LE +AI ET D
Sbjct: 301 SQNMYEEALLIFKDATKRCRGPFFKAREIFMAYFLDNRQPDLAISYLE---EAILETKDD 357
Query: 1263 KWQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETAP 1436
+W+PS E I F YF E KD+D AE + S Y LL+ YVAA E P
Sbjct: 358 EWRPSPETIAAFLNYFEETKDIDSAENFCKILKRLNCLSSNEYCLLLKVYVAAGEFLP 415
>ref|XP_006396396.1| hypothetical protein EUTSA_v10029427mg [Eutrema salsugineum]
gi|557097413|gb|ESQ37849.1| hypothetical protein
EUTSA_v10029427mg [Eutrema salsugineum]
Length = 505
Score = 330 bits (846), Expect = 9e-88
Identities = 189/488 (38%), Positives = 277/488 (56%), Gaps = 8/488 (1%)
Frame = +3
Query: 6 RGFCAATSLQAETAVEAVEHASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLDG 185
R FCA + A A+ A+S K +Y+ +S++G G K+ + L+
Sbjct: 10 RRFCATLAAAAPAAIGGEAAAASVPKKTAKNQRS-----VYKKLSSLGKRGGKMEETLNQ 64
Query: 186 YVREGHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKG 365
+ EG V+KDDL+ V+ LR +++ LE+FEWM++ + S D+A+RLDLI KT G
Sbjct: 65 FTMEGIPVKKDDLIRYVKDLRKHRQPQRALEVFEWMERKEIAFSGSDHAIRLDLIAKTNG 124
Query: 366 IAEAEKFFESLSAENKNLYTYGALLNCYCTDKLSDKAAELLKEMEKLNYVS-SLTFNNLM 542
+ AE +F SL K +YG+LLNCYC + +KA +M LN V+ SL FNNLM
Sbjct: 125 LKAAESYFNSLDLSTKTQSSYGSLLNCYCVEGEEEKAKAHFDKMCDLNLVTNSLPFNNLM 184
Query: 543 TLALRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGKN 722
+ LR +PEKVP L MK++N TYS+ +QS +LND++ V++ ++E++ +G
Sbjct: 185 AMNLRLGQPEKVPALVVAMKQKNISPCDVTYSMWIQSCGILNDLDGVEKVIEEMKADGGE 244
Query: 723 CH--WSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVR----DPVPYHFLISFYASI 884
C W ++NLAA+Y +AG ++K+L + + YHFLIS YA I
Sbjct: 245 CRSSWDTFANLAAIYSKAG-------LYSKAEAALKSLEEKMNPHERSSYHFLISLYAGI 297
Query: 885 GNLAEVNRIWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIP 1064
N EV R+W+ LK +N S +TMLQAL KL +D + + F EWES YD R+
Sbjct: 298 SNAPEVYRVWDLLKKGHPKVNNSSCLTMLQALSKLDDIDGMKKIFTEWESTCYTYDMRMA 357
Query: 1065 SLVMAGYLRQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLEAVAD 1244
+++++ YL++N EAE VFN A++K F K R++L+ H L + AL+H EA
Sbjct: 358 NVMISSYLKENMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEA--- 414
Query: 1245 AIKETDK-WQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAA 1421
A+ DK W S E IR F +F E KDVDGAE ++S +Y L++TY+AA
Sbjct: 415 AVSNQDKNWTWSSELIRSFSLHFEESKDVDGAEEFCKTLTIWSPLDSDTYTLLIKTYIAA 474
Query: 1422 EETAPGMR 1445
E+ PGMR
Sbjct: 475 EKACPGMR 482
>ref|NP_171739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173342|sp|Q9FZ24.1|PPR4_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g02370, mitochondrial; Flags: Precursor
gi|9857533|gb|AAG00888.1|AC064879_6 Hypothetical protein
[Arabidopsis thaliana] gi|332189300|gb|AEE27421.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 537
Score = 330 bits (846), Expect = 9e-88
Identities = 190/480 (39%), Positives = 281/480 (58%), Gaps = 4/480 (0%)
Frame = +3
Query: 18 AATSLQAETAVEAVEHASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLDGYVRE 197
AA ++A + A E+ V+A S LY+ +S + TG VA+ L+ ++ E
Sbjct: 40 AANVVEASVSSPAAENGVRTSVAAPTVASRQR--ELYKKLSMLSVTGGTVAETLNQFIME 97
Query: 198 GHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAEA 377
G VRKDDL C + LR ++R H EIF+WM+K K S D+A+ LDLI KTKG+ A
Sbjct: 98 GITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAA 157
Query: 378 EKFFESLSAENKNLY-TYGALLNCYCTDKLSDKAAELLKEMEKLNYVS-SLTFNNLMTLA 551
E +F +L KN TYGAL+NCYC + +KA + M++LN+V+ SL FNN+M++
Sbjct: 158 ENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMY 217
Query: 552 LRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGK-NCH 728
+R +PEKVP L + MK+R TYS+ MQS LND++ +++ + E+ K+ +
Sbjct: 218 MRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTT 277
Query: 729 WSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNLAEVNR 908
W+ +SNLAA+Y +AG M N RD +HFL+S YA I EV R
Sbjct: 278 WNTFSNLAAIYTKAGLYEKADSALKSMEEKM-NPNNRDS--HHFLMSLYAGISKGPEVYR 334
Query: 909 IWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLVMAGYL 1088
+WESLK +N+SY+ MLQA+ KLG LD + + F EWES YD R+ ++ + YL
Sbjct: 335 VWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYL 394
Query: 1089 RQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLE-AVADAIKETDK 1265
+ N EAEK+ + A++KS F K R++L+ H L + A++HLE AV+D+ + D+
Sbjct: 395 KGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDE 454
Query: 1266 WQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETAPGMR 1445
W S E + F +F + KDVDGAE ++S++ +L++TY AAE+T+P MR
Sbjct: 455 WGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMR 514
>gb|AAL38889.1| unknown protein [Arabidopsis thaliana]
Length = 537
Score = 328 bits (842), Expect = 3e-87
Identities = 189/480 (39%), Positives = 281/480 (58%), Gaps = 4/480 (0%)
Frame = +3
Query: 18 AATSLQAETAVEAVEHASSAGVSADKEDSMSTMWRLYRGISAIGATGDKVADVLDGYVRE 197
AA ++A + A E+ V+A S LY+ +S + TG VA+ L+ ++ E
Sbjct: 40 AANVVEASVSSPAAENGVRTSVAAPTVASRQR--ELYKKLSMLSVTGGTVAETLNQFIME 97
Query: 198 GHVVRKDDLLDCVRKLRNYKRHHHCLEIFEWMDKMKHNNSHKDNALRLDLICKTKGIAEA 377
G VRKDDL C + LR ++R H EIF+WM+K K S D+A+ LDLI KTKG+ A
Sbjct: 98 GITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKRKMTFSVSDHAICLDLIGKTKGLEAA 157
Query: 378 EKFFESLSAENKNLY-TYGALLNCYCTDKLSDKAAELLKEMEKLNYVS-SLTFNNLMTLA 551
E +F +L KN TYGAL+NCYC + +KA + M++LN+V+ SL FNN+M++
Sbjct: 158 ENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMY 217
Query: 552 LRSEEPEKVPGLAEEMKRRNFPMNSYTYSLLMQSYQLLNDMEAVDRTLQEIEKEGK-NCH 728
+R +PEKVP L + +K+R TYS+ MQS LND++ +++ + E+ K+ +
Sbjct: 218 MRLSQPEKVPVLVDAIKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTT 277
Query: 729 WSVYSNLAAVYIRAGNSXXXXXXXXXXXXSMKNLRVRDPVPYHFLISFYASIGNLAEVNR 908
W+ +SNLAA+Y +AG M N RD +HFL+S YA I EV R
Sbjct: 278 WNTFSNLAAIYTKAGLYEKADSALKSMEEKM-NPNNRDS--HHFLMSLYAGISKGPEVYR 334
Query: 909 IWESLKSDFKTTSNVSYMTMLQALLKLGQLDELVRYFKEWESGYKHYDSRIPSLVMAGYL 1088
+WESLK +N+SY+ MLQA+ KLG LD + + F EWES YD R+ ++ + YL
Sbjct: 335 VWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYL 394
Query: 1089 RQNKIGEAEKVFNDAVEKSGRAFCKGREILIAHFLGKREISRALEHLE-AVADAIKETDK 1265
+ N EAEK+ + A++KS F K R++L+ H L + A++HLE AV+D+ + D+
Sbjct: 395 KGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDE 454
Query: 1266 WQPSRERIRDFCKYFVEEKDVDGAEXXXXXXXXXXXVESKSYLWLLRTYVAAEETAPGMR 1445
W S E + F +F + KDVDGAE ++S++ +L++TY AAE+T+P MR
Sbjct: 455 WGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKPLDSETMTFLIKTYAAAEKTSPDMR 514