BLASTX nr result
ID: Rheum21_contig00008406
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00008406
(209 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004969374.1| PREDICTED: putative exosome complex componen... 117 1e-24
ref|XP_006644470.1| PREDICTED: putative exosome complex componen... 114 1e-23
ref|XP_006476772.1| PREDICTED: putative exosome complex componen... 114 1e-23
ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [S... 114 1e-23
ref|XP_002282635.1| PREDICTED: putative exosome complex componen... 114 1e-23
gb|EAY76792.1| hypothetical protein OsI_04749 [Oryza sativa Indi... 114 1e-23
dbj|BAD87535.1| ALM beta-like [Oryza sativa Japonica Group] gi|1... 114 1e-23
ref|XP_004138110.1| PREDICTED: putative exosome complex componen... 114 2e-23
ref|NP_001043778.1| Os01g0661400 [Oryza sativa Japonica Group] g... 114 2e-23
ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citr... 112 4e-23
tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays] 112 4e-23
tpg|DAA58255.1| TPA: hypothetical protein ZEAMMB73_922165 [Zea m... 112 4e-23
gb|ACN36007.1| unknown [Zea mays] 112 4e-23
ref|NP_001148820.1| exosome complex exonuclease RRP40 [Zea mays]... 112 4e-23
ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative ... 112 5e-23
ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [A... 111 1e-22
ref|XP_002318044.1| exonuclease-related family protein [Populus ... 111 1e-22
gb|ACG35320.1| exosome complex exonuclease RRP40 [Zea mays] 110 2e-22
ref|XP_004491574.1| PREDICTED: putative exosome complex componen... 109 3e-22
gb|EOY20707.1| PNAS-3 related isoform 4 [Theobroma cacao] 109 4e-22
>ref|XP_004969374.1| PREDICTED: putative exosome complex component rrp40-like [Setaria
italica]
Length = 239
Score = 117 bits (294), Expect = 1e-24
Identities = 55/69 (79%), Positives = 66/69 (95%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNAP+P+T+ILVSNAIM++ESL
Sbjct: 163 TSTGMSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPAPNTVILVSNAIMRSESL 222
Query: 29 SGVQQKIMV 3
SG+QQ+ MV
Sbjct: 223 SGIQQRAMV 231
>ref|XP_006644470.1| PREDICTED: putative exosome complex component rrp40-like [Oryza
brachyantha]
Length = 220
Score = 114 bits (285), Expect = 1e-23
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTGL+R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNAPSPS +I+VSNAI+K+ESL
Sbjct: 144 TSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPSPSNVIVVSNAIIKSESL 203
Query: 29 SGVQQKIMV 3
SG+ Q+ MV
Sbjct: 204 SGIGQRSMV 212
>ref|XP_006476772.1| PREDICTED: putative exosome complex component rrp40-like isoform X1
[Citrus sinensis] gi|568845839|ref|XP_006476773.1|
PREDICTED: putative exosome complex component rrp40-like
isoform X2 [Citrus sinensis]
Length = 238
Score = 114 bits (285), Expect = 1e-23
Identities = 56/69 (81%), Positives = 63/69 (91%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTGL+R+LL+ PTCPVLE LGK+LSFE AVGLNGRVWVNA SPST++LVSNAIM +ESL
Sbjct: 162 TSTGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESL 221
Query: 29 SGVQQKIMV 3
S VQQKIMV
Sbjct: 222 SAVQQKIMV 230
>ref|XP_002456088.1| hypothetical protein SORBIDRAFT_03g030230 [Sorghum bicolor]
gi|241928063|gb|EES01208.1| hypothetical protein
SORBIDRAFT_03g030230 [Sorghum bicolor]
Length = 239
Score = 114 bits (285), Expect = 1e-23
Identities = 54/69 (78%), Positives = 65/69 (94%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNAP+ ST+ILVSNAIM++ESL
Sbjct: 163 TSTGMSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESL 222
Query: 29 SGVQQKIMV 3
SG++Q+ MV
Sbjct: 223 SGIKQRAMV 231
>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
product [Vitis vinifera]
Length = 237
Score = 114 bits (285), Expect = 1e-23
Identities = 57/69 (82%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
+STGL+R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNA SPST+ILV+NAIM +ESL
Sbjct: 161 SSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMNSESL 220
Query: 29 SGVQQKIMV 3
S VQQKIMV
Sbjct: 221 SVVQQKIMV 229
>gb|EAY76792.1| hypothetical protein OsI_04749 [Oryza sativa Indica Group]
Length = 239
Score = 114 bits (285), Expect = 1e-23
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTGL+R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNAPSPS +I+VSNAI+K+ESL
Sbjct: 163 TSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPSPSNVIVVSNAIIKSESL 222
Query: 29 SGVQQKIMV 3
SG+ Q+ MV
Sbjct: 223 SGIGQRSMV 231
>dbj|BAD87535.1| ALM beta-like [Oryza sativa Japonica Group]
gi|125572934|gb|EAZ14449.1| hypothetical protein
OsJ_04370 [Oryza sativa Japonica Group]
gi|215768884|dbj|BAH01113.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 239
Score = 114 bits (285), Expect = 1e-23
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTGL+R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNAPSPS +I+VSNAI+K+ESL
Sbjct: 163 TSTGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAPSPSNVIVVSNAIIKSESL 222
Query: 29 SGVQQKIMV 3
SG+ Q+ MV
Sbjct: 223 SGIGQRSMV 231
>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
putative exosome complex component rrp40-like [Cucumis
sativus]
Length = 243
Score = 114 bits (284), Expect = 2e-23
Identities = 55/68 (80%), Positives = 65/68 (95%)
Frame = -1
Query: 206 STGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESLS 27
STGL+R+LL+ P+CPVLE+LGKKLSFETAVGLNGRVWVNA SPSTII+VSNAI+ +E+LS
Sbjct: 165 STGLSRMLLSSPSCPVLESLGKKLSFETAVGLNGRVWVNADSPSTIIVVSNAILNSETLS 224
Query: 26 GVQQKIMV 3
GVQQ+IMV
Sbjct: 225 GVQQRIMV 232
>ref|NP_001043778.1| Os01g0661400 [Oryza sativa Japonica Group]
gi|113533309|dbj|BAF05692.1| Os01g0661400 [Oryza sativa
Japonica Group] gi|215706438|dbj|BAG93294.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 239
Score = 114 bits (284), Expect = 2e-23
Identities = 54/69 (78%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTGL+R+LL+ PTCP+LEALGKKLSFE AVGLNGRVWVNAPSPS +I+VSNAI+K+ESL
Sbjct: 163 TSTGLSRMLLSSPTCPILEALGKKLSFEIAVGLNGRVWVNAPSPSNVIVVSNAIIKSESL 222
Query: 29 SGVQQKIMV 3
SG+ Q+ MV
Sbjct: 223 SGIGQRSMV 231
>ref|XP_006439811.1| hypothetical protein CICLE_v10021986mg [Citrus clementina]
gi|567894648|ref|XP_006439812.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542073|gb|ESR53051.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
gi|557542074|gb|ESR53052.1| hypothetical protein
CICLE_v10021986mg [Citrus clementina]
Length = 238
Score = 112 bits (281), Expect = 4e-23
Identities = 55/69 (79%), Positives = 63/69 (91%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TS+GL+R+LL+ PTCPVLE LGK+LSFE AVGLNGRVWVNA SPST++LVSNAIM +ESL
Sbjct: 162 TSSGLSRMLLSSPTCPVLEELGKQLSFEIAVGLNGRVWVNAESPSTVVLVSNAIMNSESL 221
Query: 29 SGVQQKIMV 3
S VQQKIMV
Sbjct: 222 SAVQQKIMV 230
>tpg|DAA58257.1| TPA: exosome complex exonuclease RRP40 [Zea mays]
Length = 239
Score = 112 bits (281), Expect = 4e-23
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLE LGKKLSFE AVGLNGRVWVNAP+ ST+ILVSNAIM++ESL
Sbjct: 163 TSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESL 222
Query: 29 SGVQQKIMV 3
SG++Q+ MV
Sbjct: 223 SGIKQRAMV 231
>tpg|DAA58255.1| TPA: hypothetical protein ZEAMMB73_922165 [Zea mays]
Length = 80
Score = 112 bits (281), Expect = 4e-23
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLE LGKKLSFE AVGLNGRVWVNAP+ ST+ILVSNAIM++ESL
Sbjct: 4 TSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESL 63
Query: 29 SGVQQKIMV 3
SG++Q+ MV
Sbjct: 64 SGIKQRAMV 72
>gb|ACN36007.1| unknown [Zea mays]
Length = 104
Score = 112 bits (281), Expect = 4e-23
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLE LGKKLSFE AVGLNGRVWVNAP+ ST+ILVSNAIM++ESL
Sbjct: 28 TSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESL 87
Query: 29 SGVQQKIMV 3
SG++Q+ MV
Sbjct: 88 SGIKQRAMV 96
>ref|NP_001148820.1| exosome complex exonuclease RRP40 [Zea mays]
gi|195622378|gb|ACG33019.1| exosome complex exonuclease
RRP40 [Zea mays] gi|238006308|gb|ACR34189.1| unknown
[Zea mays] gi|414881121|tpg|DAA58252.1| TPA: exosome
complex exonuclease RRP40 [Zea mays]
Length = 239
Score = 112 bits (281), Expect = 4e-23
Identities = 53/69 (76%), Positives = 64/69 (92%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLE LGKKLSFE AVGLNGRVWVNAP+ ST+ILVSNAIM++ESL
Sbjct: 163 TSTGMSRMLLSSPTCPVLEVLGKKLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESL 222
Query: 29 SGVQQKIMV 3
SG++Q+ MV
Sbjct: 223 SGIKQRAMV 231
>ref|XP_002511406.1| Exosome complex exonuclease RRP40, putative [Ricinus communis]
gi|223550521|gb|EEF52008.1| Exosome complex exonuclease
RRP40, putative [Ricinus communis]
Length = 234
Score = 112 bits (280), Expect = 5e-23
Identities = 55/68 (80%), Positives = 63/68 (92%)
Frame = -1
Query: 206 STGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESLS 27
STGL+R+LL+ PTCPVLEALGKKLSFE AVG+NGRVWVNA SPSTII+V+NAIM +E+LS
Sbjct: 137 STGLSRMLLSSPTCPVLEALGKKLSFEIAVGINGRVWVNATSPSTIIVVANAIMNSETLS 196
Query: 26 GVQQKIMV 3
VQQKIMV
Sbjct: 197 AVQQKIMV 204
>ref|XP_006827742.1| hypothetical protein AMTR_s00009p00262150 [Amborella trichopoda]
gi|548832362|gb|ERM95158.1| hypothetical protein
AMTR_s00009p00262150 [Amborella trichopoda]
Length = 240
Score = 111 bits (277), Expect = 1e-22
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
+STGLARLLL+ PTCPVL+ALGKKLSFE AVGLNGRVWVNA SPST+ILV+NAIM E L
Sbjct: 164 SSTGLARLLLSRPTCPVLDALGKKLSFEIAVGLNGRVWVNASSPSTVILVANAIMSAEFL 223
Query: 29 SGVQQKIMV 3
SG QQ+I+V
Sbjct: 224 SGAQQRILV 232
>ref|XP_002318044.1| exonuclease-related family protein [Populus trichocarpa]
gi|118482713|gb|ABK93275.1| unknown [Populus
trichocarpa] gi|222858717|gb|EEE96264.1|
exonuclease-related family protein [Populus trichocarpa]
Length = 242
Score = 111 bits (277), Expect = 1e-22
Identities = 54/67 (80%), Positives = 62/67 (92%)
Frame = -1
Query: 206 STGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESLS 27
STGL+R+LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNA SPS +I+V+NAIM +E+LS
Sbjct: 165 STGLSRMLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNANSPSIVIIVANAIMNSETLS 224
Query: 26 GVQQKIM 6
GVQQKIM
Sbjct: 225 GVQQKIM 231
>gb|ACG35320.1| exosome complex exonuclease RRP40 [Zea mays]
Length = 239
Score = 110 bits (275), Expect = 2e-22
Identities = 52/69 (75%), Positives = 63/69 (91%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTG++R+LL+ PTCPVLE LGK LSFE AVGLNGRVWVNAP+ ST+ILVSNAIM++ESL
Sbjct: 163 TSTGMSRMLLSSPTCPVLEVLGKXLSFEIAVGLNGRVWVNAPAASTVILVSNAIMRSESL 222
Query: 29 SGVQQKIMV 3
SG++Q+ MV
Sbjct: 223 SGIKQRAMV 231
>ref|XP_004491574.1| PREDICTED: putative exosome complex component rrp40-like [Cicer
arietinum]
Length = 104
Score = 109 bits (273), Expect = 3e-22
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = -1
Query: 206 STGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESLS 27
STGL+R+LL+ PTCPVL+ LGKKLSFE AVGLNGRVWVNA SPST I+V+NAIM +E+LS
Sbjct: 29 STGLSRMLLSSPTCPVLDTLGKKLSFEIAVGLNGRVWVNASSPSTTIIVANAIMNSETLS 88
Query: 26 GVQQKIM 6
GVQQKIM
Sbjct: 89 GVQQKIM 95
>gb|EOY20707.1| PNAS-3 related isoform 4 [Theobroma cacao]
Length = 211
Score = 109 bits (272), Expect = 4e-22
Identities = 54/69 (78%), Positives = 61/69 (88%)
Frame = -1
Query: 209 TSTGLARLLLTDPTCPVLEALGKKLSFETAVGLNGRVWVNAPSPSTIILVSNAIMKTESL 30
TSTGL+R LL+ PTCPVLEALGKKLSFE AVGLNGRVWVNA +P TI++V+NAIM +ESL
Sbjct: 135 TSTGLSRKLLSSPTCPVLEALGKKLSFEIAVGLNGRVWVNAATPDTIVVVANAIMNSESL 194
Query: 29 SGVQQKIMV 3
SG QQ IMV
Sbjct: 195 SGAQQIIMV 203