BLASTX nr result
ID: Rheum21_contig00008397
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00008397
(203 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 92 5e-17
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 89 5e-16
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 88 1e-15
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 87 2e-15
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 87 2e-15
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo... 87 3e-15
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 87 3e-15
gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus pe... 86 4e-15
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 86 7e-15
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 84 1e-14
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 84 1e-14
ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer... 84 3e-14
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 83 3e-14
emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera] 83 3e-14
gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus... 83 4e-14
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 83 4e-14
gb|EPS62990.1| hypothetical protein M569_11800 [Genlisea aurea] 82 6e-14
ref|XP_002299886.2| hypothetical protein POPTR_0001s24350g, part... 81 1e-13
ref|XP_004294581.1| PREDICTED: THO complex subunit 4-A-like [Fra... 81 1e-13
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 81 1e-13
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 92.4 bits (228), Expect = 5e-17
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL-------RAPAIQTGTKLYVSNL 160
+RRFP+RA NR+APY+ P +Q D W HDMFVD RA +I+TGTKLY+SNL
Sbjct: 35 SRRFPNRAANRTAPYSKP-VQAPDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNL 93
Query: 161 DYGVSNEDIKELFS 202
DYGVSNEDIKELFS
Sbjct: 94 DYGVSNEDIKELFS 107
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 89.4 bits (220), Expect = 5e-16
Identities = 47/74 (63%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL-------RAPAIQTGTKLYVSNL 160
ARR P+RAPNR+APYA P + W HDM++DQ RA AIQTGTKLY+SNL
Sbjct: 37 ARRVPNRAPNRAAPYAAAPKAP-ETTWQHDMYMDQGTAFAAQAGRASAIQTGTKLYISNL 95
Query: 161 DYGVSNEDIKELFS 202
+YGVSNEDIKELFS
Sbjct: 96 EYGVSNEDIKELFS 109
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 87.8 bits (216), Expect = 1e-15
Identities = 45/73 (61%), Positives = 54/73 (73%), Gaps = 7/73 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL-------RAPAIQTGTKLYVSNL 160
ARR P+RA NR+APYA K T AW HDM+ +QP+ RA +I+TGTKLY+SNL
Sbjct: 36 ARRLPNRAANRAAPYAAAKAPET--AWKHDMYANQPVAAAYPGGRASSIETGTKLYISNL 93
Query: 161 DYGVSNEDIKELF 199
DYGVSN+DIKELF
Sbjct: 94 DYGVSNDDIKELF 106
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL-------RAPAIQTGTKLYVSNL 160
+RRF +RA N + PY+ P++Q + +W HDMF D P+ RA +I+TGTKLY+SNL
Sbjct: 36 SRRFSNRAGNITTPYSKPQVQAPETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNL 95
Query: 161 DYGVSNEDIKELFS 202
D+GVS EDIKELFS
Sbjct: 96 DFGVSTEDIKELFS 109
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL-------RAPAIQTGTKLYVSNL 160
+RRF +RA N + PY+ P++Q + +W HDMF D P+ RA +I+TGTKLY+SNL
Sbjct: 36 SRRFSNRAGNITTPYSKPQVQAPETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNL 95
Query: 161 DYGVSNEDIKELFS 202
D+GVS EDIKELFS
Sbjct: 96 DFGVSTEDIKELFS 109
>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQ-------PLRAPAIQTGTKLYVSNL 160
+RRF +R NR+ PY+ K T AW HDMFVD P RA AI+TGTKLYVSNL
Sbjct: 37 SRRFRNRGLNRATPYSTSKAPET--AWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNL 94
Query: 161 DYGVSNEDIKELFS 202
DYGVSNEDIKELFS
Sbjct: 95 DYGVSNEDIKELFS 108
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/74 (63%), Positives = 52/74 (70%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQ-------PLRAPAIQTGTKLYVSNL 160
+RRF +R NR+ PY+ K T AW HDMFVD P RA AI+TGTKLYVSNL
Sbjct: 37 SRRFRNRGLNRATPYSTSKAPET--AWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNL 94
Query: 161 DYGVSNEDIKELFS 202
DYGVSNEDIKELFS
Sbjct: 95 DYGVSNEDIKELFS 108
>gb|EMJ06965.1| hypothetical protein PRUPE_ppa010358mg [Prunus persica]
Length = 252
Score = 86.3 bits (212), Expect = 4e-15
Identities = 46/75 (61%), Positives = 52/75 (69%), Gaps = 8/75 (10%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL--------RAPAIQTGTKLYVSN 157
ARR P+RA NR+ PYA K T AW HD++ DQ RA AI+TGTKLY+SN
Sbjct: 36 ARRLPNRAANRTTPYAAAKAPET--AWQHDLYTDQGAAAFPAQAGRASAIETGTKLYISN 93
Query: 158 LDYGVSNEDIKELFS 202
LDYGVSNEDIKELFS
Sbjct: 94 LDYGVSNEDIKELFS 108
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 85.5 bits (210), Expect = 7e-15
Identities = 48/73 (65%), Positives = 52/73 (71%), Gaps = 7/73 (9%)
Frame = +2
Query: 5 RRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVD-------QPLRAPAIQTGTKLYVSNLD 163
RRFP+RA NR+ PY+ PK T W HDMF D Q RA AIQTGTKLY+SNLD
Sbjct: 37 RRFPNRAANRT-PYSAPKAPET--TWQHDMFADPSSGFLVQGGRASAIQTGTKLYISNLD 93
Query: 164 YGVSNEDIKELFS 202
YGVSNEDIKELFS
Sbjct: 94 YGVSNEDIKELFS 106
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/75 (62%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQ----PL----RAPAIQTGTKLYVSN 157
ARR P+R NR APY K T W HDMF DQ P+ RA AI+TGTKLY+SN
Sbjct: 36 ARRIPNRGANRVAPYTTAKAPET--TWQHDMFADQVSAFPVQQAGRASAIETGTKLYISN 93
Query: 158 LDYGVSNEDIKELFS 202
LDYGVSNEDIKELFS
Sbjct: 94 LDYGVSNEDIKELFS 108
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 84.3 bits (207), Expect = 1e-14
Identities = 47/75 (62%), Positives = 51/75 (68%), Gaps = 8/75 (10%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQ----PL----RAPAIQTGTKLYVSN 157
ARR P+R NR APY K T W HDMF DQ P+ RA AI+TGTKLY+SN
Sbjct: 36 ARRIPNRGANRVAPYTTAKAPET--TWQHDMFADQVSAFPVQQAGRASAIETGTKLYISN 93
Query: 158 LDYGVSNEDIKELFS 202
LDYGVSNEDIKELFS
Sbjct: 94 LDYGVSNEDIKELFS 108
>ref|XP_004505883.1| PREDICTED: THO complex subunit 4-like [Cicer arietinum]
Length = 257
Score = 83.6 bits (205), Expect = 3e-14
Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 10/77 (12%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL----------RAPAIQTGTKLYV 151
ARR P+R N +APY+ K T W HD++ DQP+ RAP+I+TGTKLY+
Sbjct: 35 ARRLPNRVSNHAAPYSAAKAPET--TWQHDLYADQPVAAAAYSAQGGRAPSIETGTKLYI 92
Query: 152 SNLDYGVSNEDIKELFS 202
SNLDY VSN+DIKELFS
Sbjct: 93 SNLDYAVSNDDIKELFS 109
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPLRAPA-------IQTGTKLYVSNL 160
ARR P+R NR PY++ K T W HDMF DQ PA I+TGTKLY+SNL
Sbjct: 37 ARRLPNRGANRITPYSVSKAPET--TWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNL 94
Query: 161 DYGVSNEDIKELFS 202
DYGVSNEDIKELFS
Sbjct: 95 DYGVSNEDIKELFS 108
>emb|CAN83715.1| hypothetical protein VITISV_023787 [Vitis vinifera]
Length = 281
Score = 83.2 bits (204), Expect = 3e-14
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPLRAPA-------IQTGTKLYVSNL 160
ARR P+R NR PY++ K T W HDMF DQ PA I+TGTKLY+SNL
Sbjct: 37 ARRLPNRGANRITPYSVSKAPET--TWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNL 94
Query: 161 DYGVSNEDIKELFS 202
DYGVSNEDIKELFS
Sbjct: 95 DYGVSNEDIKELFS 108
>gb|ESW22298.1| hypothetical protein PHAVU_005G142200g [Phaseolus vulgaris]
gi|561023569|gb|ESW22299.1| hypothetical protein
PHAVU_005G142200g [Phaseolus vulgaris]
Length = 245
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 9/75 (12%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL---------RAPAIQTGTKLYVS 154
ARR P+RA NR APYA K + AW HDM+ DQ + RA +I+TGTKLY+S
Sbjct: 36 ARRLPNRAGNRPAPYAAAKAPES--AWQHDMYADQGVATAFAGQGGRASSIETGTKLYIS 93
Query: 155 NLDYGVSNEDIKELF 199
NLDYGVSN+DIKELF
Sbjct: 94 NLDYGVSNDDIKELF 108
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/74 (59%), Positives = 50/74 (67%), Gaps = 7/74 (9%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVD-------QPLRAPAIQTGTKLYVSNL 160
ARRFP+R NRS PY K T W HDM+ D Q RA AI+TGTKLY+SNL
Sbjct: 36 ARRFPNRGANRSGPYTAAKAPET--TWQHDMYSDKGAAFQGQAGRASAIETGTKLYISNL 93
Query: 161 DYGVSNEDIKELFS 202
DYGVSN+DIKELF+
Sbjct: 94 DYGVSNDDIKELFA 107
>gb|EPS62990.1| hypothetical protein M569_11800 [Genlisea aurea]
Length = 239
Score = 82.4 bits (202), Expect = 6e-14
Identities = 44/69 (63%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPT--DLAWGHDMFVDQPLRAPAIQTGTKLYVSNLDYGVS 175
ARR +RAPNR APYA P P D WGHD+F R +I+TGTKLY+SNLDYGVS
Sbjct: 35 ARRQFNRAPNRPAPYAAPFAAPKAPDAVWGHDLFPAVG-RPSSIETGTKLYISNLDYGVS 93
Query: 176 NEDIKELFS 202
NEDIKELF+
Sbjct: 94 NEDIKELFA 102
>ref|XP_002299886.2| hypothetical protein POPTR_0001s24350g, partial [Populus
trichocarpa] gi|550348078|gb|EEE84691.2| hypothetical
protein POPTR_0001s24350g, partial [Populus trichocarpa]
Length = 180
Score = 81.3 bits (199), Expect = 1e-13
Identities = 43/66 (65%), Positives = 48/66 (72%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPLRAPAIQTGTKLYVSNLDYGVSNE 181
ARRFP+RA NRSAPY K + W HDMF DQ R +++ G KLYVSNLDYGVSNE
Sbjct: 38 ARRFPNRAANRSAPYTAAKAPES--TWQHDMFRDQSGRTSSLE-GAKLYVSNLDYGVSNE 94
Query: 182 DIKELF 199
DIKELF
Sbjct: 95 DIKELF 100
>ref|XP_004294581.1| PREDICTED: THO complex subunit 4-A-like [Fragaria vesca subsp.
vesca]
Length = 250
Score = 81.3 bits (199), Expect = 1e-13
Identities = 44/74 (59%), Positives = 49/74 (66%), Gaps = 8/74 (10%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL--------RAPAIQTGTKLYVSN 157
ARR P+RA NR+ PY K + W HDMF DQ RA AI+TGTKLY+SN
Sbjct: 37 ARRLPNRAGNRATPYGGAKAPES--TWQHDMFADQGAAYSAAPAGRASAIETGTKLYISN 94
Query: 158 LDYGVSNEDIKELF 199
LDYGVSNEDIKELF
Sbjct: 95 LDYGVSNEDIKELF 108
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/77 (53%), Positives = 54/77 (70%), Gaps = 10/77 (12%)
Frame = +2
Query: 2 ARRFPDRAPNRSAPYAMPKIQPTDLAWGHDMFVDQPL----------RAPAIQTGTKLYV 151
+RRFP+RA NR+APYA K + W HD++ DQ + RA +I+TGTKLY+
Sbjct: 36 SRRFPNRAANRAAPYATAKAP--EATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYI 93
Query: 152 SNLDYGVSNEDIKELFS 202
SNLDYGVS++DIKELF+
Sbjct: 94 SNLDYGVSSDDIKELFA 110