BLASTX nr result

ID: Rheum21_contig00008396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00008396
         (505 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35343.1| unknown [Lotus japonicus]                              185   6e-45
ref|XP_006352572.1| PREDICTED: COP9 signalosome complex subunit ...   184   1e-44
ref|XP_006378018.1| hypothetical protein POPTR_0011s17270g [Popu...   184   1e-44
ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|5...   184   1e-44
gb|AFK36185.1| unknown [Lotus japonicus]                              183   2e-44
gb|ESW20681.1| hypothetical protein PHAVU_005G006100g [Phaseolus...   182   5e-44
gb|AFK46238.1| unknown [Medicago truncatula]                          182   5e-44
ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   181   7e-44
ref|XP_004248321.1| PREDICTED: COP9 signalosome complex subunit ...   181   9e-44
ref|XP_004499677.1| PREDICTED: COP9 signalosome complex subunit ...   179   3e-43
ref|XP_006452788.1| hypothetical protein CICLE_v10008979mg [Citr...   176   4e-42
ref|XP_002529210.1| signalosome subunit, putative [Ricinus commu...   174   1e-41
gb|EOY11823.1| COP9 signalosome subunit 6A [Theobroma cacao]          174   1e-41
ref|XP_003527566.1| PREDICTED: COP9 signalosome complex subunit ...   173   2e-41
ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit ...   173   2e-41
ref|XP_002866135.1| hypothetical protein ARALYDRAFT_495718 [Arab...   171   9e-41
dbj|BAB08872.1| transcription factor-like; similar to CH6 and CO...   171   1e-40
ref|NP_568839.1| COP9 signalosome complex subunit 6a [Arabidopsi...   171   1e-40
ref|XP_006279652.1| hypothetical protein CARUB_v10026800mg [Caps...   170   2e-40
gb|EXB38286.1| COP9 signalosome complex subunit 6a [Morus notabi...   170   2e-40

>gb|AFK35343.1| unknown [Lotus japonicus]
          Length = 182

 Score =  185 bits (469), Expect = 6e-45
 Identities = 92/121 (76%), Positives = 102/121 (84%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALPS----------PPRVFG 186
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q    +A ++++PS          PPRV+G
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNSVPSNGADGVVSSVPPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQKGRTVE+FNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 
Sbjct: 61  CVIGVQKGRTVEVFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAE 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>ref|XP_006352572.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Solanum
           tuberosum]
          Length = 311

 Score =  184 bits (467), Expect = 1e-44
 Identities = 94/115 (81%), Positives = 100/115 (86%), Gaps = 4/115 (3%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSA----LPSPPRVFGGVIGVQ 168
           MA+SSSSGLTFKLHPLV+LNISDHYTRVK+Q   A AG+SA     P PPRVFG VIGVQ
Sbjct: 1   MASSSSSGLTFKLHPLVLLNISDHYTRVKSQATGADAGSSAGADSPPPPPRVFGCVIGVQ 60

Query: 167 KGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAHE 3
           +GRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA E
Sbjct: 61  RGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPNFYILGWYSTGSDAQE 115


>ref|XP_006378018.1| hypothetical protein POPTR_0011s17270g [Populus trichocarpa]
           gi|550328624|gb|ERP55815.1| hypothetical protein
           POPTR_0011s17270g [Populus trichocarpa]
          Length = 230

 Score =  184 bits (466), Expect = 1e-44
 Identities = 92/111 (82%), Positives = 98/111 (88%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALPSPPRVFGGVIGVQKGRT 156
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+QT     G SA P PPRV+G VIGVQ+GRT
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQTNGCSDGGSASP-PPRVYGCVIGVQRGRT 59

Query: 155 VEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAHE 3
           VEIFNSFELLYDP T SLDR F+EKKQELYKKVFPHFYILGWYSTGSDA E
Sbjct: 60  VEIFNSFELLYDPVTHSLDRAFIEKKQELYKKVFPHFYILGWYSTGSDAEE 110


>ref|XP_002330530.1| predicted protein [Populus trichocarpa]
           gi|566196007|ref|XP_006378019.1| COP9 signalosome
           subunit 6 family protein [Populus trichocarpa]
           gi|550328625|gb|ERP55816.1| COP9 signalosome subunit 6
           family protein [Populus trichocarpa]
          Length = 306

 Score =  184 bits (466), Expect = 1e-44
 Identities = 92/111 (82%), Positives = 98/111 (88%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALPSPPRVFGGVIGVQKGRT 156
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+QT     G SA P PPRV+G VIGVQ+GRT
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQTNGCSDGGSASP-PPRVYGCVIGVQRGRT 59

Query: 155 VEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAHE 3
           VEIFNSFELLYDP T SLDR F+EKKQELYKKVFPHFYILGWYSTGSDA E
Sbjct: 60  VEIFNSFELLYDPVTHSLDRAFIEKKQELYKKVFPHFYILGWYSTGSDAEE 110


>gb|AFK36185.1| unknown [Lotus japonicus]
          Length = 317

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/121 (76%), Positives = 101/121 (83%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALPS----------PPRVFG 186
           MA+ SSSGLTFKLHPLVI+NISDHYTRVK+Q    +A ++++PS          PPRV+G
Sbjct: 1   MASPSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNSVPSNGADGVVSSVPPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQKGRTVEIFNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 
Sbjct: 61  CVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAE 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>gb|ESW20681.1| hypothetical protein PHAVU_005G006100g [Phaseolus vulgaris]
          Length = 320

 Score =  182 bits (461), Expect = 5e-44
 Identities = 94/124 (75%), Positives = 101/124 (81%), Gaps = 13/124 (10%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVA----GNSALPS---------PPR 195
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q    +A     N+A P+         PPR
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPPHANNAAAPNGGDGVVSSLPPR 60

Query: 194 VFGGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGS 15
           V+G VIGVQKGRTVEIFNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILGWYSTGS
Sbjct: 61  VYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGS 120

Query: 14  DAHE 3
           DA E
Sbjct: 121 DAEE 124


>gb|AFK46238.1| unknown [Medicago truncatula]
          Length = 318

 Score =  182 bits (461), Expect = 5e-44
 Identities = 95/123 (77%), Positives = 101/123 (82%), Gaps = 12/123 (9%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGN------------SALPSPPRV 192
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q    +A +            S+LP PPRV
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNATNNGGDGVVSSLP-PPRV 59

Query: 191 FGGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSD 12
           FG VIGVQKGRTVEIFNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILGWYSTGSD
Sbjct: 60  FGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSD 119

Query: 11  AHE 3
           A E
Sbjct: 120 AEE 122


>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
           gi|296090054|emb|CBI39873.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  181 bits (460), Expect = 7e-44
 Identities = 94/121 (77%), Positives = 99/121 (81%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQH----------AVAGNSALPSPPRVFG 186
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+QTQ           A A  S  P PPRVFG
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQTQPPHLSSNGGEGAAAAASPPPPPPRVFG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQ+GRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA 
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYSTGSDAQ 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>ref|XP_004248321.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Solanum
           lycopersicum]
          Length = 313

 Score =  181 bits (459), Expect = 9e-44
 Identities = 94/117 (80%), Positives = 101/117 (86%), Gaps = 6/117 (5%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQ--HAVAGNSAL----PSPPRVFGGVIG 174
           MA+SSSSGLTFKLHPLV+LNISDHYTRVK+Q     A AG+SA     P+PPRVFG VIG
Sbjct: 1   MASSSSSGLTFKLHPLVLLNISDHYTRVKSQATGADAGAGSSATADSPPAPPRVFGCVIG 60

Query: 173 VQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAHE 3
           VQ+GRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFP+FYILGWYSTGSDA E
Sbjct: 61  VQRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPNFYILGWYSTGSDAQE 117


>ref|XP_004499677.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Cicer
           arietinum]
          Length = 317

 Score =  179 bits (455), Expect = 3e-43
 Identities = 94/121 (77%), Positives = 99/121 (81%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVA--------GNSALPS--PPRVFG 186
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q     A        G  A+ S  PPRV+G
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPHNNATNNGGDAVGSSLPPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQKGRTVEIFNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 
Sbjct: 61  CVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAE 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>ref|XP_006452788.1| hypothetical protein CICLE_v10008979mg [Citrus clementina]
           gi|568841603|ref|XP_006474747.1| PREDICTED: COP9
           signalosome complex subunit 6a-like [Citrus sinensis]
           gi|557556014|gb|ESR66028.1| hypothetical protein
           CICLE_v10008979mg [Citrus clementina]
          Length = 312

 Score =  176 bits (445), Expect = 4e-42
 Identities = 87/116 (75%), Positives = 97/116 (83%), Gaps = 5/116 (4%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALP-----SPPRVFGGVIGV 171
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q  H+ +  +        + PRV+G VIG+
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNHSSSATTTNDDNNNGAQPRVYGCVIGI 60

Query: 170 QKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAHE 3
           Q+GRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFPHFYILGWYSTGSDA E
Sbjct: 61  QRGRTVEIFNSFELLYDPSTHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAQE 116


>ref|XP_002529210.1| signalosome subunit, putative [Ricinus communis]
           gi|223531328|gb|EEF33166.1| signalosome subunit,
           putative [Ricinus communis]
          Length = 318

 Score =  174 bits (441), Expect = 1e-41
 Identities = 90/122 (73%), Positives = 97/122 (79%), Gaps = 11/122 (9%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAG-----------NSALPSPPRVF 189
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q    V             N+   +PPRV+
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPVTTTTNGGSDGGGENTVSLAPPRVY 60

Query: 188 GGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 9
           G VIGVQ+GRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFPHFYILGWYSTGSDA
Sbjct: 61  GCVIGVQRGRTVEIFNSFELLYDPITHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDA 120

Query: 8   HE 3
            E
Sbjct: 121 EE 122


>gb|EOY11823.1| COP9 signalosome subunit 6A [Theobroma cacao]
          Length = 321

 Score =  174 bits (440), Expect = 1e-41
 Identities = 89/125 (71%), Positives = 97/125 (77%), Gaps = 14/125 (11%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALPS--------------PP 198
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q    +   S+  +               P
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPLTSTSSSATVINNNTNGVEHHQQAP 60

Query: 197 RVFGGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTG 18
           RV+G VIGVQ+GRTVEIFNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILGWYSTG
Sbjct: 61  RVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTG 120

Query: 17  SDAHE 3
           SDA E
Sbjct: 121 SDAQE 125


>ref|XP_003527566.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 322

 Score =  173 bits (439), Expect = 2e-41
 Identities = 91/126 (72%), Positives = 97/126 (76%), Gaps = 15/126 (11%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQ------HAVAGNS---------ALPSP 201
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q        H    N+         + P  
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHTTTNNNNANGGDGVVSPPLH 60

Query: 200 PRVFGGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYST 21
           PRV+G VIGVQKGRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFPHFYILGWYST
Sbjct: 61  PRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRTFLEKKQELYKKVFPHFYILGWYST 120

Query: 20  GSDAHE 3
           GSDA E
Sbjct: 121 GSDAEE 126


>ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 318

 Score =  173 bits (439), Expect = 2e-41
 Identities = 91/122 (74%), Positives = 97/122 (79%), Gaps = 11/122 (9%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQ--HAVAGNS---------ALPSPPRVF 189
           MA+SSSSGLTFKLHPLVI+NISDHYTRVK+Q    HA   N+           P  PRV+
Sbjct: 1   MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHNNNNANGGDGVVSPLSPRVY 60

Query: 188 GGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 9
           G VIGVQKGRTVEIFNSFELLYDP + SLDR FLEKKQELYKKVFPHFYILGWYSTGSDA
Sbjct: 61  GCVIGVQKGRTVEIFNSFELLYDPSSHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDA 120

Query: 8   HE 3
            E
Sbjct: 121 EE 122


>ref|XP_002866135.1| hypothetical protein ARALYDRAFT_495718 [Arabidopsis lyrata subsp.
           lyrata] gi|297311970|gb|EFH42394.1| hypothetical protein
           ARALYDRAFT_495718 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score =  171 bits (433), Expect = 9e-41
 Identities = 88/121 (72%), Positives = 95/121 (78%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVA----------GNSALPSPPRVFG 186
           MA SSSSGLTFKLHPLVI+NISDHYTRVKTQ     +          G + +   PRV+G
Sbjct: 1   MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMIQQNPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQ+GRTVEIFNSFELLYDP TQ+LDR FLEKKQELYKKVFP FYILGWYSTGSDA 
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAD 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>dbj|BAB08872.1| transcription factor-like; similar to CH6 and COP9 complex subunit
           6 [Arabidopsis thaliana]
          Length = 286

 Score =  171 bits (432), Expect = 1e-40
 Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVA----------GNSALPSPPRVFG 186
           MA SSSSGLTFKLHPLVI+NISDHYTRVKTQ     +          G +     PRV+G
Sbjct: 1   MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQ+GRTVEIFNSFELLYDP TQ+LDR FLEKKQELYKKVFP FYILGWYSTGSDA 
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAE 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>ref|NP_568839.1| COP9 signalosome complex subunit 6a [Arabidopsis thaliana]
           gi|55976550|sp|Q8W206.2|CSN6A_ARATH RecName: Full=COP9
           signalosome complex subunit 6a; Short=AtCSN6a;
           Short=Signalosome subunit 6a gi|15809663|gb|AAL07275.1|
           COP9 complex subunit 6 [Arabidopsis thaliana]
           gi|108385379|gb|ABF85779.1| At5g56280 [Arabidopsis
           thaliana] gi|332009361|gb|AED96744.1| COP9 signalosome
           complex subunit 6a [Arabidopsis thaliana]
          Length = 317

 Score =  171 bits (432), Expect = 1e-40
 Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVA----------GNSALPSPPRVFG 186
           MA SSSSGLTFKLHPLVI+NISDHYTRVKTQ     +          G +     PRV+G
Sbjct: 1   MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQ+GRTVEIFNSFELLYDP TQ+LDR FLEKKQELYKKVFP FYILGWYSTGSDA 
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAE 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>ref|XP_006279652.1| hypothetical protein CARUB_v10026800mg [Capsella rubella]
           gi|482548356|gb|EOA12550.1| hypothetical protein
           CARUB_v10026800mg [Capsella rubella]
          Length = 317

 Score =  170 bits (431), Expect = 2e-40
 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 10/121 (8%)
 Frame = -3

Query: 335 MAASSSSGLTFKLHPLVILNISDHYTRVKTQTQH----AVAGNSA------LPSPPRVFG 186
           MA SSSSGLTFKLHPLVI+NISDHYTRVKTQ         + NS+      L   PRV+G
Sbjct: 1   MAPSSSSGLTFKLHPLVIVNISDHYTRVKTQLNPPASVCASSNSSNNDEAVLQQNPRVYG 60

Query: 185 GVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAH 6
            VIGVQ+GRTVEIFNSFELLYDP TQ+LDR FLEKKQELYKKVFP FYILGWYSTGSDA 
Sbjct: 61  CVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAE 120

Query: 5   E 3
           E
Sbjct: 121 E 121


>gb|EXB38286.1| COP9 signalosome complex subunit 6a [Morus notabilis]
          Length = 333

 Score =  170 bits (430), Expect = 2e-40
 Identities = 88/130 (67%), Positives = 98/130 (75%), Gaps = 20/130 (15%)
 Frame = -3

Query: 332 AASSSSGLTFKLHPLVILNISDHYTRVKTQTQHAVAGNSALPS----------------- 204
           +++SSSGLTFKLHPLVI+NISDH+TRVK+Q Q   +  S+  S                 
Sbjct: 8   SSNSSSGLTFKLHPLVIVNISDHFTRVKSQQQRTSSSPSSPSSSDNDINDQQQQQQQQQE 67

Query: 203 ---PPRVFGGVIGVQKGRTVEIFNSFELLYDPDTQSLDRPFLEKKQELYKKVFPHFYILG 33
              PPRV+G VIGVQ+GRTVEIFNSFELLYDP T SLDRPFLEKKQELYKKVFPHFYILG
Sbjct: 68  HQQPPRVYGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILG 127

Query: 32  WYSTGSDAHE 3
           WYSTGSDA E
Sbjct: 128 WYSTGSDALE 137


Top