BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00008376
         (3256 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...  1106   0.0  
gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]       1068   0.0  
gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]       1067   0.0  
ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum...  1063   0.0  
gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus pe...  1062   0.0  
ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragari...  1057   0.0  
gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]          1057   0.0  
ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum...  1056   0.0  
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...  1051   0.0  
ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus ...  1036   0.0  
ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citr...  1036   0.0  
ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citr...  1029   0.0  
ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [A...  1026   0.0  
ref|XP_002298421.2| DNA topoisomerase family protein [Populus tr...  1023   0.0  
ref|XP_002314046.2| DNA topoisomerase family protein [Populus tr...  1020   0.0  
ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus comm...  1016   0.0  
dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]           1008   0.0  
ref|XP_006296839.1| hypothetical protein CARUB_v10012826mg [Caps...   993   0.0  
ref|XP_006412895.1| hypothetical protein EUTSA_v10024219mg [Eutr...   990   0.0  
ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi...   989   0.0  

>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 1106 bits (2861), Expect = 0.0
 Identities = 591/1015 (58%), Positives = 730/1015 (71%), Gaps = 29/1015 (2%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAG++VVGR++YGVFPL+GK+LNVR+A  KQILENAEIQN+KQI
Sbjct: 449  KCTLILTEGDSAKALAMAGISVVGRNHYGVFPLRGKLLNVRDAQKKQILENAEIQNIKQI 508

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQQ K Y+S+ SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF+VEF+T
Sbjct: 509  LGLQQGKEYDSIKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 568

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+ RN +VL+FYSM EYE+W ESL GN +GW+IKYYKGLGTS+S EGKEYFKDL 
Sbjct: 569  PIVKATH-RNGRVLSFYSMPEYESWKESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLG 627

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +HKKDF+W  D +D DAIELAFSKKKIE RKNWLRQ++PG+ LD K+K IKY+DFV+KEL
Sbjct: 628  KHKKDFMWV-DEKDGDAIELAFSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKEL 686

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN +KE KI+QF GYV+E SAYHHG+QS
Sbjct: 687  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQS 746

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQDFVGSNNINL  P+GQFGTR QGGKDHAS RYI T L  I+RFLFPK+DD
Sbjct: 747  LASTIIGMAQDFVGSNNINLLLPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDD 806

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
            +LLDYL EDG S+EP+WY P IPMVLVNGSEGIGTGWSS IPN+NPRDIIAN+R LLN E
Sbjct: 807  ILLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGE 866

Query: 1263 TTVPMDPWYRGFKGIMEKS--TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQF 1436
               PMDPWYRGF+G +EK+  TK+    YTV GIIEE++E TLRI+ELPVR+WTQDYK+F
Sbjct: 867  MMEPMDPWYRGFRGTIEKTDPTKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEF 926

Query: 1437 LESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLT 1616
            LESI+  N      DK+K+ FIKD+++H+ DT   FE+ M  E LLMAK EGL++KFKLT
Sbjct: 927  LESIMTGN------DKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLT 980

Query: 1617 TSMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKV 1796
            T +ST+NMHLFD  G IKKY   EQILEEF+HLRL+ YEKRK+  +DNLE E++KLENKV
Sbjct: 981  TKISTSNMHLFDSNGTIKKYETPEQILEEFFHLRLEFYEKRKRVLLDNLELELLKLENKV 1040

Query: 1797 RFILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTD 1976
            RFIL V+  E++V+ +K+A L  EL +KGF P PKK+KSVE AV GA +++T ++ E TD
Sbjct: 1041 RFILGVVRGEIIVSNRKRADLFHELHQKGFTPFPKKSKSVEIAVAGA-TDDTEEAEENTD 1099

Query: 1977 PQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSK 2156
                 V+  G+R +DY+YLLSM+I TLT EK++ELC+++DK+++ +D++KK TPK+LW  
Sbjct: 1100 ----AVSKGGVRATDYEYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKKATPKALWIT 1155

Query: 2157 DLDALEGALDEQDKHDAHKAEEDLRQ--------AGAKASKQPARKPRKAAPKNVSSESA 2312
            DLDALE  LDEQDK+DA +AEE  +Q        AG K S+Q  + PRK   K  ++E A
Sbjct: 1156 DLDALERELDEQDKNDA-RAEETRKQLKSRVMSEAGMKVSRQAPKNPRKNNKKANNAEPA 1214

Query: 2313 VGSSMTTAASVMDIDNVAQEV-VXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLA 2489
              +   +A+S M++++V + V                   T             L+ RLA
Sbjct: 1215 AETMDVSASSAMEMESVPEVVKPKGRAAPRKAPAKKKEMPTSVLKDEDDDEVHELKERLA 1274

Query: 2490 AYNIES--DNSPVNESKEQDAPAATK---------NPRKNAXXXXXXXXXXXXXXFEVEE 2636
            AYN+ES  D S   E++    PAA K           +  A              FEVEE
Sbjct: 1275 AYNLESSPDGSAAMEAEVPQVPAARKKEPSRRAAAQKKPLASFTEISDDDEDDEDFEVEE 1334

Query: 2637 VA-----PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXX 2801
            V+                                      Q Q++GQ L+T++ K     
Sbjct: 1335 VSASDVKKKGGRKPAANAKAAAAKPAAAAAKNKRGAANKQQPQLLGQTLLTEIFK--PAE 1392

Query: 2802 XXXXXXXXXXRRMRASPFNKKSSSVLGRKQQEEEDA-SPASEGNAD-SNSAALES 2960
                      R+MRASPFNKKS SVLG   +E+E A +  + G+A  SNS+  ES
Sbjct: 1393 TLGISPEKKVRKMRASPFNKKSGSVLGSTGEEDETAETEENSGSASTSNSSGGES 1447


>gb|EOY18138.1| DNA topoisomerase 2 isoform 2 [Theobroma cacao]
          Length = 1285

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 542/868 (62%), Positives = 667/868 (76%), Gaps = 9/868 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALA+AGLAVVGR++YGVFPL+GK+LNVREA+HKQ+++NAEIQNLK+I
Sbjct: 257  KCTLILTEGDSAKALAVAGLAVVGRNHYGVFPLRGKLLNVREASHKQLMDNAEIQNLKRI 316

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQQ K Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VEF+T
Sbjct: 317  LGLQQGKEYSNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFIT 376

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  + VL+FYSM EYE W ESL GN  GW+IKYYKGLGTS+S EGK+YFK+LD
Sbjct: 377  PIVKATHK-TKGVLSFYSMPEYEFWKESLGGNAKGWSIKYYKGLGTSTSKEGKDYFKNLD 435

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+K+FVW  D QD +AIELAFSKKKIEARKNWLRQ+EPG+ LD   K IKY++F++KEL
Sbjct: 436  KHRKEFVWQ-DEQDGEAIELAFSKKKIEARKNWLRQFEPGTHLDQSQKLIKYSEFINKEL 494

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN VKE K++QF GYV+E SAYHHG+QS
Sbjct: 495  ILFSMADLQRSIPSMIDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQS 554

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STI+GMAQDFVGSNNINL  P GQFGTR QGGKD AS RYI T L  I+R+LFPK+DD
Sbjct: 555  LASTIVGMAQDFVGSNNINLLNPGGQFGTRNQGGKDAASARYIFTNLSPITRYLFPKDDD 614

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG S+EP WY PIIPMVLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN E
Sbjct: 615  GLLDYLNEDGQSIEPIWYVPIIPMVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 674

Query: 1263 TTVPMDPWYRGFKGIMEKS-TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWYRGFKG +EK+ +KE G TYT++GIIEE+DE TLRITELPVRRWTQDY++FL
Sbjct: 675  QMEPMHPWYRGFKGNIEKTASKEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFL 734

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ESII  ND           FIK+FR +S DT   FE+ +  E +++AK EGL+KKFKLTT
Sbjct: 735  ESIITGNDP----------FIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTT 784

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+HLR + YEKRKK  +DNLE E++K+ENKVR
Sbjct: 785  TISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVR 844

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGA--DSEETGDSSERT 1973
            FIL V+  E++VN +K+A L  EL  KGF P PKKAK+VE AV GA  D+EET ++SE  
Sbjct: 845  FILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKTVEVAVAGATDDTEETEENSE-- 902

Query: 1974 DPQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWS 2153
                  V+++GL+ SDYDYLLSM+I +LT EK++ELC+++DK+ QE+++++K TPKSLW 
Sbjct: 903  ------VSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWL 956

Query: 2154 KDLDALEGALDEQDK----HDAHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGS 2321
            KDLD LE  LDEQDK     +A K  +   +AG +A +Q  + PRK   K  ++E+   +
Sbjct: 957  KDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPRKINKKEKNAETVTET 1016

Query: 2322 SMTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNI 2501
            +  +++S M+    A   V                               LR RLA YN+
Sbjct: 1017 TDISSSSAMETAETAPAAVKPKGRGGSRKAKKDDSDD---DDDEDFGIPDLRERLAKYNL 1073

Query: 2502 ES--DNSPVNESKEQDAPAATKNPRKNA 2579
            +S  D+S   E++    PA  K P K A
Sbjct: 1074 DSSPDHSAAMETEVPQVPAGKKEPSKRA 1101


>gb|EOY18137.1| DNA topoisomerase 2 isoform 1 [Theobroma cacao]
          Length = 1473

 Score = 1067 bits (2759), Expect = 0.0
 Identities = 541/868 (62%), Positives = 667/868 (76%), Gaps = 9/868 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALA+AGLAVVGR++YGVFPL+GK+LNVREA+HKQ+++NAEIQNLK+I
Sbjct: 446  KCTLILTEGDSAKALAVAGLAVVGRNHYGVFPLRGKLLNVREASHKQLMDNAEIQNLKRI 505

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQQ K Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VEF+T
Sbjct: 506  LGLQQGKEYSNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFIT 565

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  + VL+FYSM EYE W ESL GN  GW+IKYYKGLGTS+S EGK+YFK+LD
Sbjct: 566  PIVKATHK-TKGVLSFYSMPEYEFWKESLGGNAKGWSIKYYKGLGTSTSKEGKDYFKNLD 624

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+K+FVW  D QD +AIELAFSKKKIEARKNWLRQ+EPG+ LD   K IKY++F++KEL
Sbjct: 625  KHRKEFVWQ-DEQDGEAIELAFSKKKIEARKNWLRQFEPGTHLDQSQKLIKYSEFINKEL 683

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN VKE K++QF GYV+E SAYHHG+QS
Sbjct: 684  ILFSMADLQRSIPSMIDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQS 743

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STI+GMAQDFVGSNNINL  P GQFGTR QGGKD AS RYI T L  I+R+LFPK+DD
Sbjct: 744  LASTIVGMAQDFVGSNNINLLNPGGQFGTRNQGGKDAASARYIFTNLSPITRYLFPKDDD 803

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG S+EP WY PIIPMVLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN E
Sbjct: 804  GLLDYLNEDGQSIEPIWYVPIIPMVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 863

Query: 1263 TTVPMDPWYRGFKGIMEKS-TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWYRGFKG +EK+ +KE G TYT++GIIEE+DE TLRITELPVRRWTQDY++FL
Sbjct: 864  QMEPMHPWYRGFKGNIEKTASKEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFL 923

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ESII  ND           FIK+FR +S DT   FE+ +  E +++AK EGL+KKFKLTT
Sbjct: 924  ESIITGNDP----------FIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTT 973

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+HLR + YEKRKK  +DNLE E++K+ENKVR
Sbjct: 974  TISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVR 1033

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGA--DSEETGDSSERT 1973
            FIL V+  E++VN +K+A L  EL  KGF P PKKAK+VE AV GA  D+EET ++SE  
Sbjct: 1034 FILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKTVEVAVAGATDDTEETEENSE-- 1091

Query: 1974 DPQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWS 2153
                  V+++GL+ SDYDYLLSM+I +LT EK++ELC+++DK+ QE+++++K TPKSLW 
Sbjct: 1092 ------VSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWL 1145

Query: 2154 KDLDALEGALDEQDK----HDAHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGS 2321
            KDLD LE  LDEQDK     +A K  +   +AG +A +Q  + PRK   K  ++E+   +
Sbjct: 1146 KDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPRKINKKEKNAETVTET 1205

Query: 2322 SMTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNI 2501
            +  +++S M+ +     V                                LR RLA YN+
Sbjct: 1206 TDISSSSAMETETAPAAVKPKGRGGSRKAKKDDSDDD----DDEDFGIPDLRERLAKYNL 1261

Query: 2502 ES--DNSPVNESKEQDAPAATKNPRKNA 2579
            +S  D+S   E++    PA  K P K A
Sbjct: 1262 DSSPDHSAAMETEVPQVPAGKKEPSKRA 1289


>ref|XP_006345427.1| PREDICTED: DNA topoisomerase 2-like [Solanum tuberosum]
          Length = 1485

 Score = 1063 bits (2749), Expect = 0.0
 Identities = 567/991 (57%), Positives = 697/991 (70%), Gaps = 17/991 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAG++VVGRD+YGVFPL+GK+LNVREA+HKQ+ EN EI+++K+I
Sbjct: 446  KCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRGKLLNVREASHKQVSENKEIESIKKI 505

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQ  K YESV SLRYGHLMIMTDQDHDGSHIKGL+INFIH FWPSLLK+PSF+VEF+T
Sbjct: 506  LGLQTGKEYESVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFLVEFIT 565

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  R +LAFY+M EYEAW  SL    +GW+IKYYKGLGTS+S EGKEYF+DL 
Sbjct: 566  PIVKATHKSGR-ILAFYTMPEYEAWRRSLGATSSGWSIKYYKGLGTSTSKEGKEYFQDLQ 624

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+KDF+W+ D+QD ++IELAFSKKKIEARKNWLRQ+EPG+ LD K+KYI YT+FV+KEL
Sbjct: 625  KHRKDFIWA-DNQDGESIELAFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKEL 683

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFCAFKRN VKE K+SQF GYV+E SAYHHG+QS
Sbjct: 684  ILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQS 743

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD+VGSNN+NL +P+GQFGTR  GGKDHAS RYI T L  I+RFLFPK+DD
Sbjct: 744  LSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKDDD 803

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             +LDYL EDG S+EP+WY PIIPMVLVNGSEGIGTGWSSY+PN+NPRD++AN+R LLNDE
Sbjct: 804  TVLDYLNEDGQSIEPTWYIPIIPMVLVNGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDE 863

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PMDPWY+GFKG +EK +TKE G TYTV+GIIEE  E TLRI+ELPVRRWT+DYKQFL
Sbjct: 864  LMEPMDPWYKGFKGTIEKTATKETGATYTVTGIIEEFSETTLRISELPVRRWTEDYKQFL 923

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ES+  S DK KD       FIK+ R +  +    FE+ M  E LL+A+ EGL+KKFKLTT
Sbjct: 924  ESMTVSTDKSKDA------FIKEVRAYGDENSVCFEVIMSEENLLLAQQEGLLKKFKLTT 977

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G IKKY   E+ILEEFYH+RL+ YEKRKK  ++ LE E++++ENKVR
Sbjct: 978  TISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYEKRKKTLLEILELELLRIENKVR 1037

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+  E++VN +K+A L+ EL  KGF P PKK K VE+ V  ADS +  + SE    
Sbjct: 1038 FILGVVKGEIIVNNRKRADLLLELKNKGFTPFPKK-KPVEAVV--ADSTDDAEDSE---- 1090

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
            +  + +++G+R SDYDYLLSM+I TLT EK++ELC+++DK++ E+++M+  TPK LW KD
Sbjct: 1091 ESPEESNKGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRNATPKDLWMKD 1150

Query: 2160 LDALEGALDEQDKHD--AHKAEEDLRQAGAKAS-KQPARKPRKAAPKNVSSESAVGSSMT 2330
            LD L+  LDEQDK D    +A E L++    A+ K P  KPRK   K    ES       
Sbjct: 1151 LDVLDKQLDEQDKLDIQTEEAREKLKKKVMNAAGKAPKPKPRKTTKKAAVVESTAEPMDV 1210

Query: 2331 TAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIES- 2507
            +  S+ +  NV +                     V            L+ RLAAYN+ S 
Sbjct: 1211 SVGSMAETANVTEVAKPKGRGGGSKKAPAKAKPVVVEDEEEEDEVLALKDRLAAYNLNSS 1270

Query: 2508 -DNSPVNESKEQDAP-AATKNPRKNA---XXXXXXXXXXXXXXFEVE-----EVAP--XX 2651
             D S V E+   +AP A TK P K A                  E+E     E AP    
Sbjct: 1271 PDRSEVTET---EAPKAQTKAPAKRAAAQKKALPSTPDVSEGEDEIEISDDNEFAPEVAV 1327

Query: 2652 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXXXXXXXXXXXX 2831
                                          QSQ +GQ+LIT VLK               
Sbjct: 1328 GGKKKGGRKPAAAKAAAAPKPPKKRAPANKQSQSVGQRLITQVLK--PAEDAGVSPDRKV 1385

Query: 2832 RRMRASPFNKKSSSVLGRKQQEEEDASPASE 2924
            R+MR SPFNKKS +V+GR        S  SE
Sbjct: 1386 RKMRESPFNKKSGAVMGRNTSSSSSTSHESE 1416


>gb|EMJ21781.1| hypothetical protein PRUPE_ppa000202mg [Prunus persica]
          Length = 1471

 Score = 1062 bits (2746), Expect = 0.0
 Identities = 570/1008 (56%), Positives = 710/1008 (70%), Gaps = 25/1008 (2%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAGLAVVGRD+YGVFPL+GK+LNVREA+  Q+ +N EI+N+K+I
Sbjct: 452  KCTLILTEGDSAKALAMAGLAVVGRDHYGVFPLRGKLLNVREASAIQVRDNEEIKNIKRI 511

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQQ K Y S+ SLRYG LMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF+VEF+T
Sbjct: 512  LGLQQDKEYTSLKSLRYGSLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 571

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K N + LAFYSM EYEAW ESL GN +GW+IKYYKGLGTS+S EG++YF++L 
Sbjct: 572  PIVKATHK-NGKSLAFYSMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGRDYFQNLA 630

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDF+W  D +D +AIELAFSKKKIE RKNWLRQ+EP   LD K+K IKY+DFVHKEL
Sbjct: 631  MHKKDFIWI-DERDGEAIELAFSKKKIEERKNWLRQFEPSVHLDQKEKLIKYSDFVHKEL 689

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            IQFS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN VKE K++QF GYV+E SAYHHG+QS
Sbjct: 690  IQFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQS 749

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD+VGSNNINL +P+GQFGTR  GGKDHAS RYI T L  I+RFLFPK+DD
Sbjct: 750  LASTIIGMAQDYVGSNNINLLQPNGQFGTRNLGGKDHASARYIYTRLSPITRFLFPKDDD 809

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG S+EP+WY PIIP VLVNGSEGIGTGWSSYIPN+N RDI+AN+R LLN E
Sbjct: 810  RLLDYLNEDGQSIEPTWYVPIIPTVLVNGSEGIGTGWSSYIPNYNTRDIVANVRRLLNGE 869

Query: 1263 TTVPMDPWYRGFKGIMEKSTKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFLE 1442
              VPMDPWYRGF G +EK+ KE G +YTV G+IEE +E T+RI+ELP+RRWTQDYK+FLE
Sbjct: 870  AMVPMDPWYRGFSGTIEKTVKESGVSYTVCGVIEEGNETTVRISELPIRRWTQDYKEFLE 929

Query: 1443 SIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTTS 1622
            SI + NDK KD       FI+ F  HS  +     + +  E L+ A+ EGL+KKFKLTTS
Sbjct: 930  SISQGNDKAKD------PFIEGFTQHSDHSTVDIIVHLPEENLMAARQEGLLKKFKLTTS 983

Query: 1623 MSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVRF 1802
            +ST+NMHLFDP+G+IKKY   EQILEEF+HLRL+ YEKRKK  +DNLE E++KLENKVRF
Sbjct: 984  ISTSNMHLFDPKGVIKKYDTPEQILEEFFHLRLEFYEKRKKVLLDNLEMELLKLENKVRF 1043

Query: 1803 ILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGA--DSEETGDSSERTD 1976
            ILAV+N E++V+ +++A L  EL +KGF P PKK K+ E  V GA  D+EET ++S    
Sbjct: 1044 ILAVVNGEIIVSNRRRADLFLELQQKGFTPFPKKTKAQEPEVAGAIEDTEETEENS---- 1099

Query: 1977 PQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSK 2156
               E  +  G R+SDY+YL+SM+I TLT E+++ LC+++DKV+ E+ E++  TP+SLW K
Sbjct: 1100 ---ESASGNGARISDYEYLISMAIGTLTIERVQALCADRDKVNNEVAELRNSTPRSLWLK 1156

Query: 2157 DLDALEGALDEQDKHDAHKAEEDLRQAGAKASKQPARKPRKAAPKNV--------SSESA 2312
            DLDALE  L E +K +A  AEE  +++  +    PA K  + APKN         ++E+A
Sbjct: 1157 DLDALEMELGELEKSEA-LAEEAKKKSRNQVKNAPAAKVSRPAPKNPRKNNKKANNAEAA 1215

Query: 2313 VGSSMTTAASVMDIDNVAQEVV--XXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARL 2486
              S  T+++ V +++  A E+V                   +             L+ RL
Sbjct: 1216 AESRETSSSFVFEMEK-APEIVKRKVGAVAKKAPAGKKQAKSAVVLSDDDDEVLELKDRL 1274

Query: 2487 AAYNIES--DNSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFEVE-EVAPXXXX 2657
            AAYN++S  +NS   E++    P   K P K A              FEVE   AP    
Sbjct: 1275 AAYNLDSSPENSAGKETEVPQEPVQRKEPSKRA------MQIDDDEDFEVEIAAAPAAGK 1328

Query: 2658 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQV---IGQKLITDVLKXXXXXXXXXXXXXX 2828
                                        QSQ     GQKL+TD+LK              
Sbjct: 1329 KGGRKAAGTTKASKPPAAAKKRGAAANKQSQASSSSGQKLLTDMLK--PVETSGVSPEPK 1386

Query: 2829 XRRMRASPFNKKSSSVLGR-------KQQEEEDASPASEGNADSNSAA 2951
             R+MRASPFNKKSSSV+G+        + EE+  +P++E  +D+  AA
Sbjct: 1387 VRKMRASPFNKKSSSVMGKVSLEVEMAESEEKVDTPSTEERSDAPVAA 1434


>ref|XP_004308680.1| PREDICTED: DNA topoisomerase 2-like [Fragaria vesca subsp. vesca]
          Length = 1469

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 561/986 (56%), Positives = 695/986 (70%), Gaps = 19/986 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAGLAVVGRD+YGVFPL+GK+LNVREA+  Q+ +N EI+N+K+I
Sbjct: 449  KCTLILTEGDSAKALAMAGLAVVGRDHYGVFPLRGKLLNVREASTTQLRDNEEIKNIKKI 508

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQQ K Y ++ SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VEF+T
Sbjct: 509  LGLQQDKEYTNIKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFIT 568

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  ++ LAFYSM EYEAW ESL GN +GWTIKYYKGLGTS+S EG++YF++LD
Sbjct: 569  PIVKATHKNGKE-LAFYSMPEYEAWRESLRGNASGWTIKYYKGLGTSTSKEGRDYFQNLD 627

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDFVW  D +D +AIELAFSKKKIE RKNWLRQ+EPG+ LD K+K +KY+DFVHKEL
Sbjct: 628  MHKKDFVWI-DERDGEAIELAFSKKKIEERKNWLRQFEPGTHLDQKEKLVKYSDFVHKEL 686

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            IQFS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN +KE K++QF GYV+E SAYHHG+QS
Sbjct: 687  IQFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 746

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD+VGSNNIN  +P+GQFGTR  GGKDHAS RYI T L  I+RFLFPK+DD
Sbjct: 747  LASTIIGMAQDYVGSNNINFLQPNGQFGTRNLGGKDHASARYIYTRLSPITRFLFPKDDD 806

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG S+EP+WY PIIP VLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN +
Sbjct: 807  RLLDYLNEDGQSIEPTWYVPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGD 866

Query: 1263 TTVPMDPWYRGFKGIMEKSTKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFLE 1442
              VPMDPWYRGF G +EK+ KE G +YT  GIIEE++E TLRI+ELP+RRWTQDYK+FLE
Sbjct: 867  EMVPMDPWYRGFTGFIEKTVKETGTSYTACGIIEEVNETTLRISELPIRRWTQDYKEFLE 926

Query: 1443 SIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTTS 1622
            SI + NDK KD       FI+ F  HS  +     + +  E L+ A+ EGL+KKF+LTTS
Sbjct: 927  SISQGNDKAKD------PFIEGFTQHSDHSTVEILVHLPEENLMAARKEGLLKKFRLTTS 980

Query: 1623 MSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVRF 1802
            ++TTNMHLFDP+G+IKKY  AEQILEEF+ LRL+ YEKRKK  +DNLE E++K+ENKVRF
Sbjct: 981  IATTNMHLFDPKGVIKKYDTAEQILEEFFPLRLEFYEKRKKVLLDNLELELLKMENKVRF 1040

Query: 1803 ILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDPQ 1982
            IL V+N E++V+ +K+A L  EL +KGF P PKK KSVE  V GA      + +E T+  
Sbjct: 1041 ILGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKSVEPEVAGAT-----EDTEETEEN 1095

Query: 1983 DEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKDL 2162
             E V S G+R+SDY+YL+SM+I TLT E++E L +++DKV++++++++  TPKSLW KDL
Sbjct: 1096 SETVISNGVRISDYEYLISMAIGTLTIERVEALLADRDKVNEQVNDLRGSTPKSLWLKDL 1155

Query: 2163 DALEGALDEQDKHDAHKAEEDLRQAG---------AKASKQPARKPRKAAPKNVSSESAV 2315
            D LE  L+E +K +A  A+E  R++           K SKQ A KPRK   K  ++E+  
Sbjct: 1156 DVLEAELNELEKSEA-LADEAKRKSRNNQIKNAPVGKVSKQ-APKPRKNTKKVNNAEAIP 1213

Query: 2316 GSSMTTAASVMDID---NVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARL 2486
             S  T+++S M+I+    V +                     V            L+ RL
Sbjct: 1214 ESRETSSSSAMEIEKPPEVMKRRGVAAGSKKAPAKKQVKSTVVLSDDDDDEEMLDLKDRL 1273

Query: 2487 AAYNIESDNSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFEVEEVAP------- 2645
            AAYN+  D+SP  E++    PA  K   K A              FEVE  A        
Sbjct: 1274 AAYNL--DSSPDKETEVPLKPAQKKEASKKA--TLKDDEDDDDDDFEVEIAAAPAAVKKG 1329

Query: 2646 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXXXXXXXXXX 2825
                                             S   GQKL+TD+LK             
Sbjct: 1330 GRKPAGAAKAAAAAKPPVAAKKRGAAAKKDTQTSSSSGQKLLTDMLK-PAAESSGVSPDP 1388

Query: 2826 XXRRMRASPFNKKSSSVLGRKQQEEE 2903
              R+MR SPFNKKS SVL R   E+E
Sbjct: 1389 KVRKMRESPFNKKSGSVLSRVNLEDE 1414


>gb|EOY18139.1| Topoisomerase II isoform 3 [Theobroma cacao]
          Length = 1244

 Score = 1057 bits (2733), Expect = 0.0
 Identities = 524/798 (65%), Positives = 645/798 (80%), Gaps = 7/798 (0%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALA+AGLAVVGR++YGVFPL+GK+LNVREA+HKQ+++NAEIQNLK+I
Sbjct: 446  KCTLILTEGDSAKALAVAGLAVVGRNHYGVFPLRGKLLNVREASHKQLMDNAEIQNLKRI 505

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQQ K Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VEF+T
Sbjct: 506  LGLQQGKEYSNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFIT 565

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  + VL+FYSM EYE W ESL GN  GW+IKYYKGLGTS+S EGK+YFK+LD
Sbjct: 566  PIVKATHK-TKGVLSFYSMPEYEFWKESLGGNAKGWSIKYYKGLGTSTSKEGKDYFKNLD 624

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+K+FVW  D QD +AIELAFSKKKIEARKNWLRQ+EPG+ LD   K IKY++F++KEL
Sbjct: 625  KHRKEFVWQ-DEQDGEAIELAFSKKKIEARKNWLRQFEPGTHLDQSQKLIKYSEFINKEL 683

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN VKE K++QF GYV+E SAYHHG+QS
Sbjct: 684  ILFSMADLQRSIPSMIDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQS 743

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STI+GMAQDFVGSNNINL  P GQFGTR QGGKD AS RYI T L  I+R+LFPK+DD
Sbjct: 744  LASTIVGMAQDFVGSNNINLLNPGGQFGTRNQGGKDAASARYIFTNLSPITRYLFPKDDD 803

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG S+EP WY PIIPMVLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN E
Sbjct: 804  GLLDYLNEDGQSIEPIWYVPIIPMVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 863

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWYRGFKG +EK ++KE G TYT++GIIEE+DE TLRITELPVRRWTQDY++FL
Sbjct: 864  QMEPMHPWYRGFKGNIEKTASKEAGVTYTITGIIEEVDETTLRITELPVRRWTQDYREFL 923

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ESII  ND           FIK+FR +S DT   FE+ +  E +++AK EGL+KKFKLTT
Sbjct: 924  ESIITGNDP----------FIKEFRQYSDDTTVEFEVILTEENMMVAKQEGLLKKFKLTT 973

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+HLR + YEKRKK  +DNLE E++K+ENKVR
Sbjct: 974  TISTSNMHLFDSKGMIKKYDTPEQILEEFFHLRFEFYEKRKKLLLDNLEMELLKMENKVR 1033

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGA--DSEETGDSSERT 1973
            FIL V+  E++VN +K+A L  EL  KGF P PKKAK+VE AV GA  D+EET ++SE  
Sbjct: 1034 FILGVVKGEIIVNNRKRADLFLELQTKGFTPFPKKAKTVEVAVAGATDDTEETEENSE-- 1091

Query: 1974 DPQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWS 2153
                  V+++GL+ SDYDYLLSM+I +LT EK++ELC+++DK+ QE+++++K TPKSLW 
Sbjct: 1092 ------VSAKGLQASDYDYLLSMAIGSLTLEKVQELCADRDKLQQEVEDLRKATPKSLWL 1145

Query: 2154 KDLDALEGALDEQDK----HDAHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGS 2321
            KDLD LE  LDEQDK     +A K  +   +AG +A +Q  + PRK   K  ++E+   +
Sbjct: 1146 KDLDNLEIQLDEQDKAAQAEEAAKLVKGRGEAGKRAQRQAPKIPRKINKKEKNAETVTET 1205

Query: 2322 SMTTAASVMDIDNVAQEV 2375
            +  +++S M+ +     V
Sbjct: 1206 TDISSSSAMETETAPAAV 1223


>ref|XP_004229644.1| PREDICTED: DNA topoisomerase 2-like [Solanum lycopersicum]
          Length = 1477

 Score = 1056 bits (2732), Expect = 0.0
 Identities = 557/986 (56%), Positives = 695/986 (70%), Gaps = 12/986 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAG++VVGRD+YGVFPL+GK+LNVREA+HKQ+ EN EI+++K+I
Sbjct: 446  KCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRGKLLNVREASHKQVSENKEIESIKKI 505

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQ  K Y+SV SLRYGHLMIMTDQDHDGSHIKGL+INFIH FWPSLLK+PSF+VEF+T
Sbjct: 506  LGLQTGKEYDSVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFLVEFIT 565

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  R +LAFY+M EYEAW  SL    +GW+IKYYKGLGTS+S EGKEYF+DL 
Sbjct: 566  PIVKATHKSGR-ILAFYTMPEYEAWRRSLGATSSGWSIKYYKGLGTSTSKEGKEYFQDLQ 624

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+KDFVW+ D+QD ++IELAFSKKKIEARKNWLRQ+EPG+ LD K+KYI YT+FV+KEL
Sbjct: 625  KHRKDFVWA-DNQDGESIELAFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKEL 683

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFCAFKRN VKE K+SQF GYV+E SAYHHG+QS
Sbjct: 684  ILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQS 743

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD+VGSNN+NL +P+GQFGTR  GGKDHAS RYI T L  I+RFLFPK+DD
Sbjct: 744  LSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKDDD 803

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             +LDYL EDG S+EP+WY P+IP VLVNGSEGIGTGWSSY+PN+NPRD++AN+R LLNDE
Sbjct: 804  TILDYLNEDGQSIEPTWYVPVIPTVLVNGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDE 863

Query: 1263 TTVPMDPWYRGFKGIMEKS-TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PMDPWY+GFKG +EK+ TKE G TYTV+GIIEE+ E TLRI+ELPVRRWT+DYKQFL
Sbjct: 864  LMEPMDPWYKGFKGKIEKTATKETGATYTVTGIIEEVSETTLRISELPVRRWTEDYKQFL 923

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ES+  S DK KD       FIK+ R +  +    FE+ M  + LL+A+ EGL+KKFKLTT
Sbjct: 924  ESMTVSTDKAKDS------FIKEVRAYGDENSVCFEVIMSEDNLLLAQQEGLLKKFKLTT 977

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G IKKY   E+ILEEFYH+RL+ YEKRKK  ++ LE E++++ENKV+
Sbjct: 978  TISTSNMHLFDSKGKIKKYDAPEEILEEFYHVRLEYYEKRKKALLEILELELLRIENKVK 1037

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+  E++VN +K+A L+ EL  KGF P PKK K VE+ V  ADS +  D SE +  
Sbjct: 1038 FILGVVKGEIIVNNRKRAELLLELKNKGFTPFPKK-KPVEAVV--ADSTDDADDSEESPE 1094

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
            +    +S+G+R SDYDYLLSM+I TLT EK++ELC+++DK++ E+++M+  TPK LW KD
Sbjct: 1095 E----SSRGVRASDYDYLLSMAIGTLTLEKVQELCADRDKLNAEVEDMRNATPKHLWMKD 1150

Query: 2160 LDALEGALDEQDKHD--AHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGSSMTT 2333
            LD L+  LDEQDK D    +A E L++    A+ + A KP K    N  +ES   S   +
Sbjct: 1151 LDVLDKQLDEQDKIDIQTEEAREKLKKKVMNAAGKAAPKP-KPRKTNKKAESTAESMDVS 1209

Query: 2334 AASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIESDN 2513
              S  +  NV++ V                   V            L+ RLAAYN+ S  
Sbjct: 1210 FGSTAETANVSEVV-----KPKGRGRPAKAKPIVVEDEEEEDEVLALKDRLAAYNLNSSP 1264

Query: 2514 SPVNESKEQDAPAATKNPRKNA-----XXXXXXXXXXXXXXFEVE----EVAPXXXXXXX 2666
                 ++ +   A TK P K A                    E++    E A        
Sbjct: 1265 DRSEVTETEVPKAQTKAPAKRAAAQKKALPSTPDVSDGEDAIEIDDDEFEPAAAVGGKKK 1324

Query: 2667 XXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXXXXXXXXXXXXRRMRA 2846
                                     QSQ +GQ+LIT VLK               R+MRA
Sbjct: 1325 GGRKPAAAKAAAAPKPPGKKAPANNQSQSVGQRLITQVLK--PAEDAGVSPDRKVRKMRA 1382

Query: 2847 SPFNKKSSSVLGRKQQEEEDASPASE 2924
            SPFNKKS +V+G+       +S  SE
Sbjct: 1383 SPFNKKSGAVMGKNTSSSSTSSHESE 1408


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 1051 bits (2719), Expect = 0.0
 Identities = 559/997 (56%), Positives = 700/997 (70%), Gaps = 24/997 (2%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAG++VVGRD+YGVFPL+GK+LNVREA+HKQ+ EN EI+ +K+I
Sbjct: 445  KCTLILTEGDSAKALAMAGISVVGRDHYGVFPLRGKLLNVREASHKQVSENKEIEAIKKI 504

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQ  K Y+SV SLRYGHLMIMTDQDHDGSHIKGL+INFIH FWPSLLK+PSF++EF+T
Sbjct: 505  LGLQTGKEYDSVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHTFWPSLLKVPSFLIEFIT 564

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KAT+K  + +L+FY+M EYE+W +SL  N +GW+IKYYKGLGTS+S EGKEYF+DL 
Sbjct: 565  PIVKATHKSGK-ILSFYTMPEYESWRKSLGANSSGWSIKYYKGLGTSTSKEGKEYFQDLQ 623

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+KDF+W+ D+QD ++IELAFSKKKIEARKNWLRQ+EPG+ LD K+KYI YT+FV+KEL
Sbjct: 624  KHRKDFIWA-DNQDGESIELAFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKEL 682

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFCAFKRN VKE K+SQF GYV+E SAYHHG+QS
Sbjct: 683  ILFSMADLQRSIPSMLDGLKPGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQS 742

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD+VGSNN+NL +P+GQFGTR  GGKDHAS RYI T L  I+RFLFPKEDD
Sbjct: 743  LSSTIIGMAQDYVGSNNVNLLQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKEDD 802

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             + DYL EDG  +EP+WY PI+PMVL+NGSEGIGTGWSSY+PN+NPRD++AN+R LLNDE
Sbjct: 803  TIHDYLNEDGQYIEPTWYVPIVPMVLINGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDE 862

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PMDPWY+GFKG +EK +TKE G TYTV+GIIEE++E TLRI+ELPVRRWT+DYKQFL
Sbjct: 863  PMEPMDPWYKGFKGTIEKTATKEAGATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFL 922

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ES+  SNDK KD       FIK+ R +  +    FE+ M  E L++A+ EGL+KKFKL T
Sbjct: 923  ESMTVSNDKAKD------PFIKEVRAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLAT 976

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD  G IKKY + E ILEEFYH+RL+ YEKRKK  ++ LE E++++ENKV+
Sbjct: 977  TISTSNMHLFDSNGKIKKYDNPEDILEEFYHVRLEYYEKRKKALLEILELELLRIENKVK 1036

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+  E++VN +K+A L+ EL EKGF P PKK K+VE+ V         D+S+  + 
Sbjct: 1037 FILGVVKVEIIVNNRKRADLLLELKEKGFTPFPKK-KAVEAVV--------ADTSDDAED 1087

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
             +E++N +G+R  DYDYLLSM I TLT EK++ELC+E+D+++ E+++M+  TPK LW KD
Sbjct: 1088 SEEELN-RGVRAGDYDYLLSMPIGTLTLEKVQELCAERDQLNGEVEDMRNATPKLLWLKD 1146

Query: 2160 LDALEGALDEQDKHD--AHKAEEDLRQ--AGAKASKQPARKPRKAAPK-NVSSESAVGSS 2324
            LD LE  LDEQDK D  A +A E +++    A   K P  KPRK   K +V   +A    
Sbjct: 1147 LDVLEKQLDEQDKIDIQAEEAREKIKKKVMNAAGLKAPKPKPRKNVKKASVVESTAEPMD 1206

Query: 2325 MTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTV-XXXXXXXXXXXPLRARLAAYNI 2501
              +  +  +  NV + V                   V             L+ RLAAYN+
Sbjct: 1207 RVSCFNSGNRSNVTEVVKPKARGGSKKAPAKAKPIAVEDEEEEEDDEVLALKDRLAAYNL 1266

Query: 2502 ESDNSPVNESKEQDAPAATKN--PRKNAXXXXXXXXXXXXXXFEVE-----------EVA 2642
             S      E+ E +AP A K    RK A               E E           EVA
Sbjct: 1267 NSSPDHSAEAMETEAPKAQKKAPTRKAAAKKKTLPSIADVSEGEDEIEISDDDESEPEVA 1326

Query: 2643 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXXXXXXXXX 2822
                                             Q+  IGQKLIT +LK            
Sbjct: 1327 VGGKKKGGRKPATAKAAPAAAKQPPKKRGPANKQAVGIGQKLITSILK-PAENTDNSSPE 1385

Query: 2823 XXXRRMRASPFNKKSSSVLGRKQ----QEEEDASPAS 2921
               R+MRASPFN+KS +VLG+ +    QE EDASP S
Sbjct: 1386 KKVRKMRASPFNEKSGAVLGKNKGSTLQENEDASPVS 1422


>ref|XP_006482851.1| PREDICTED: DNA topoisomerase 2-like [Citrus sinensis]
          Length = 1456

 Score = 1036 bits (2678), Expect = 0.0
 Identities = 550/1002 (54%), Positives = 693/1002 (69%), Gaps = 14/1002 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            +CTLILTEGDSAKALAMAGL+VVGRD +GVFPL+GK+LNVREA+  Q+L N+EI N+K+I
Sbjct: 445  QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGL+Q   Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF+VEF+T
Sbjct: 505  LGLKQGVEYNNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 564

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KATNK N +VL+FYSM +YEAW ESL GN + W+IKYYKGLGTS+S EGKEYF+++ 
Sbjct: 565  PIVKATNK-NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 623

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDFVW +D QD +AIELAFSKKKIEARK WL Q+EPG+ LD K+KYIKY+DFV+KEL
Sbjct: 624  LHKKDFVWEDD-QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 682

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN +KE K++QF GYV+E SAYHHG+QS
Sbjct: 683  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 742

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STI+GMAQDFVGSNNINL +P+GQFGTR QGGKD AS RYI T L  I+RFLFPK+DD
Sbjct: 743  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 802

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG  +EP+WY PIIP VLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN E
Sbjct: 803  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 862

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWYRGF+G +EK ++KE G TYTV+GIIEE++E TLRI ELP+RRWTQDY++FL
Sbjct: 863  MMEPMHPWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 922

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ESII+ ND           FI+ FR +S DT   FE+ +  E ++  K EGL+KKFKLTT
Sbjct: 923  ESIIDQNDS----------FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTT 972

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+H+RL+ YEKRKK  ++NLE E++KLENKVR
Sbjct: 973  TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1032

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+N E+VVN +K+  L+ EL +KGF P PK +KS+E+ V GA      D +E ++ 
Sbjct: 1033 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT-----DETEESEE 1087

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
              E VN  G++  DYDYLLSM+I TLT EK++ L +++DK+++E+D+++K TP+SLW KD
Sbjct: 1088 NPEVVN--GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1145

Query: 2160 LDALEGALDEQDKHDAHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGSSMTTAA 2339
            LDAL+  LDE DK DA   EE ++  G   S    +   K APKN        ++     
Sbjct: 1146 LDALDMQLDELDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKNARKNDKKSNNARATE 1205

Query: 2340 SVMDIDNVAQEV-VXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIE--SD 2510
            ++ ++DNV + V                                 L  +LA+  +E   D
Sbjct: 1206 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDEEEDEVPDLKQRLAKLNEQLASTKLEPSPD 1265

Query: 2511 NSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFE---------VEEVAPXXXXXX 2663
             S V E+++   PA  K P K                 +          E  AP      
Sbjct: 1266 QSGVMETEKVQVPAKKKEPSKRTAAQKKAVTVETSDSEDEIIIDDDEAFEIAAPEAGKKG 1325

Query: 2664 XXXXXXXXXXXXXXXXXXXXXXXXXXQSQV-IGQKLITDVLKXXXXXXXXXXXXXXXRRM 2840
                                      Q +  +GQ+L+T++LK               R+M
Sbjct: 1326 GRKAAGNTKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLK-----PTESSPEKKVRKM 1380

Query: 2841 RASPFNKKSSSVLGRKQQEEEDASPASEGNADSNSAALESVV 2966
            RASPFNKKS S+LGR    EE +     G++ S S  +  V+
Sbjct: 1381 RASPFNKKSGSMLGRAGTIEEPS-----GSSPSTSEEVAEVL 1417


>ref|XP_006439079.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541275|gb|ESR52319.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1456

 Score = 1036 bits (2678), Expect = 0.0
 Identities = 550/1002 (54%), Positives = 693/1002 (69%), Gaps = 14/1002 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            +CTLILTEGDSAKALAMAGL+VVGRD +GVFPL+GK+LNVREA+  Q+L N+EI N+K+I
Sbjct: 445  QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGL+Q   Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF+VEF+T
Sbjct: 505  LGLKQGVEYNNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 564

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KATNK N +VL+FYSM +YEAW ESL GN + W+IKYYKGLGTS+S EGKEYF+++ 
Sbjct: 565  PIVKATNK-NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 623

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDFVW +D QD +AIELAFSKKKIEARK WL Q+EPG+ LD K+KYIKY+DFV+KEL
Sbjct: 624  LHKKDFVWEDD-QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 682

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN +KE K++QF GYV+E SAYHHG+QS
Sbjct: 683  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 742

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STI+GMAQDFVGSNNINL +P+GQFGTR QGGKD AS RYI T L  I+RFLFPK+DD
Sbjct: 743  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 802

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG  +EP+WY PIIP VLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN E
Sbjct: 803  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 862

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWYRGF+G +EK ++KE G TYTV+GIIEE++E TLRI ELP+RRWTQDY++FL
Sbjct: 863  MMEPMHPWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 922

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ESII+ ND           FI+ FR +S DT   FE+ +  E ++  K EGL+KKFKLTT
Sbjct: 923  ESIIDQNDS----------FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTT 972

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+H+RL+ YEKRKK  ++NLE E++KLENKVR
Sbjct: 973  TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1032

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+N E+VVN +K+  L+ EL +KGF P PK +KS+E+ V GA      D +E ++ 
Sbjct: 1033 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT-----DETEESEE 1087

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
              E VN  G++  DYDYLLSM+I TLT EK++ L +++DK+++E+D+++K TP+SLW KD
Sbjct: 1088 NPEVVN--GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1145

Query: 2160 LDALEGALDEQDKHDAHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGSSMTTAA 2339
            LDAL+  LDE DK DA   EE ++  G   S    +   K APKN        ++     
Sbjct: 1146 LDALDMQLDELDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKNARKNDKKSNNARATE 1205

Query: 2340 SVMDIDNVAQEV-VXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIE--SD 2510
            ++ ++DNV + V                                 L  +LA+  +E   D
Sbjct: 1206 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDEEEDEVPDLKQRLAKLNEQLASTKLEPSPD 1265

Query: 2511 NSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFE---------VEEVAPXXXXXX 2663
             S V E+++   PA  K P K                 +          E  AP      
Sbjct: 1266 QSGVMETEKVQVPAKKKEPSKRTAAQKKAVTVETSDSEDEIIIDDDEAFEIAAPEAGKKG 1325

Query: 2664 XXXXXXXXXXXXXXXXXXXXXXXXXXQSQV-IGQKLITDVLKXXXXXXXXXXXXXXXRRM 2840
                                      Q +  +GQ+L+T++LK               R+M
Sbjct: 1326 GRKAAGNTKAAKPAVETKKRGPAKKQQPEASLGQRLLTEMLK-----PTESSPEKKVRKM 1380

Query: 2841 RASPFNKKSSSVLGRKQQEEEDASPASEGNADSNSAALESVV 2966
            RASPFNKKS S+LGR    EE +     G++ S S  +  V+
Sbjct: 1381 RASPFNKKSGSMLGRAGTIEEPS-----GSSPSTSEEVAEVL 1417


>ref|XP_006439078.1| hypothetical protein CICLE_v10030505mg [Citrus clementina]
            gi|557541274|gb|ESR52318.1| hypothetical protein
            CICLE_v10030505mg [Citrus clementina]
          Length = 1455

 Score = 1029 bits (2661), Expect = 0.0
 Identities = 549/1002 (54%), Positives = 692/1002 (69%), Gaps = 14/1002 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            +CTLILTEGDSAKALAMAGL+VVGRD +GVFPL+GK+LNVREA+  Q+L N+EI N+K+I
Sbjct: 445  QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGL+Q   Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF+VEF+T
Sbjct: 505  LGLKQGVEYNNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 564

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KATNK N +VL+FYSM +YEAW ESL GN + W+IKYYKGLGTS+S EGKEYF+++ 
Sbjct: 565  PIVKATNK-NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 623

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDFVW +D QD +AIELAFSKKKIEARK WL Q+EPG+ LD K+KYIKY+DFV+KEL
Sbjct: 624  LHKKDFVWEDD-QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 682

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN +KE K++QF GYV+E SAYHHG+QS
Sbjct: 683  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 742

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STI+GMAQDFVGSNNINL +P+GQFGTR QGGKD AS RYI T L  I+RFLFPK+DD
Sbjct: 743  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 802

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
             LLDYL EDG  +EP+WY PIIP VLVNGSEGIGTGWSSYIPN+NPRDI+AN+R LLN E
Sbjct: 803  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 862

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWYRGF+G +EK ++KE G TYTV+GIIEE++E TLRI ELP+RRWTQDY++FL
Sbjct: 863  MMEPMHPWYRGFRGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 922

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ESII+ ND           FI+ FR +S DT   FE+ +  E ++  K EGL+KKFKLTT
Sbjct: 923  ESIIDQNDS----------FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTT 972

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+H+RL+ YEKRKK  ++NLE E++KLENKVR
Sbjct: 973  TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1032

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+N E+VVN +K+  L+ EL +KGF P PK +KS+E+ V GA      D +E ++ 
Sbjct: 1033 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT-----DETEESEE 1087

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
              E VN  G++  DYDYLLSM+I TLT EK++ L +++DK+++E+D+++K TP+SLW KD
Sbjct: 1088 NPEVVN--GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1145

Query: 2160 LDALEGALDEQDKHDAHKAEEDLRQAGAKASKQPARKPRKAAPKNVSSESAVGSSMTTAA 2339
            LDAL+  LD  DK DA   EE ++  G   S    +   K APKN        ++     
Sbjct: 1146 LDALDMQLD-LDKSDARAEEERMKIKGNGNSDAGPKIVAKRAPKNARKNDKKSNNARATE 1204

Query: 2340 SVMDIDNVAQEV-VXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIE--SD 2510
            ++ ++DNV + V                                 L  +LA+  +E   D
Sbjct: 1205 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDEEEDEVPDLKQRLAKLNEQLASTKLEPSPD 1264

Query: 2511 NSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFE---------VEEVAPXXXXXX 2663
             S V E+++   PA  K P K                 +          E  AP      
Sbjct: 1265 QSGVMETEKVQVPAKKKEPSKRTAAQKKAVTVETSDSEDEIIIDDDEAFEIAAPEAGKKG 1324

Query: 2664 XXXXXXXXXXXXXXXXXXXXXXXXXXQSQV-IGQKLITDVLKXXXXXXXXXXXXXXXRRM 2840
                                      Q +  +GQ+L+T++LK               R+M
Sbjct: 1325 GRKAAGNTKAAKPAVETKKRGPAKKQQPEASLGQRLLTEMLK-----PTESSPEKKVRKM 1379

Query: 2841 RASPFNKKSSSVLGRKQQEEEDASPASEGNADSNSAALESVV 2966
            RASPFNKKS S+LGR    EE +     G++ S S  +  V+
Sbjct: 1380 RASPFNKKSGSMLGRAGTIEEPS-----GSSPSTSEEVAEVL 1416


>ref|XP_006838283.1| hypothetical protein AMTR_s00103p00101630 [Amborella trichopoda]
            gi|548840751|gb|ERN00852.1| hypothetical protein
            AMTR_s00103p00101630 [Amborella trichopoda]
          Length = 1505

 Score = 1026 bits (2653), Expect = 0.0
 Identities = 523/864 (60%), Positives = 653/864 (75%), Gaps = 5/864 (0%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAG++VVGRD++GVFPL+GK+LNVREAT  QI +N EIQN+KQI
Sbjct: 458  KCTLILTEGDSAKALAMAGISVVGRDHFGVFPLRGKLLNVREATKTQIKDNKEIQNIKQI 517

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQ  K Y+SV SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VEF+T
Sbjct: 518  LGLQHGKVYDSVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFIT 577

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KA NK N +VL+FY++ EYE+W ESL GN  GWTIKYYKGLGTS+S EGKEYFK+++
Sbjct: 578  PIVKARNK-NGKVLSFYTLPEYESWKESLGGNARGWTIKYYKGLGTSTSQEGKEYFKEIN 636

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +HKKDF+W +D QD DAIELAFSKKKIEARKNWLR +EPG+ LD K+K IKY+DFV+KEL
Sbjct: 637  KHKKDFIWVDD-QDGDAIELAFSKKKIEARKNWLRHFEPGTYLDQKEKLIKYSDFVNKEL 695

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN V + K+ QF GYV+E SAYHHG+QS
Sbjct: 696  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVSQAKVVQFSGYVSEHSAYHHGEQS 755

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L +TI+GMAQDFVG+NNINL +P GQFGTR +GGKD AS RYI TCL  I+RFLFPK+DD
Sbjct: 756  LAATIVGMAQDFVGTNNINLLQPLGQFGTRNRGGKDAASARYIFTCLSPITRFLFPKDDD 815

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
            VLLDY  EDG  +EP+WY PIIP+VL+NGSEGIGTGWSSY+PN+NPRD+ AN++ LLN E
Sbjct: 816  VLLDYQNEDGQCIEPNWYMPIIPLVLINGSEGIGTGWSSYVPNYNPRDVAANVKRLLNGE 875

Query: 1263 TTVPMDPWYRGFKGIMEKS-TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
            + +PM+PWY+GFKG +EKS TKEGG  YTVSGI+EEI+E TLRITELP+RRWT+DYK +L
Sbjct: 876  SMLPMEPWYKGFKGTIEKSATKEGGVGYTVSGIVEEINETTLRITELPIRRWTEDYKVYL 935

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ES+   ++K       KE FI D+++H+TDT   F++ +  E + +++ EGLMK FKLTT
Sbjct: 936  ESLRTGSEK------TKEPFIVDYKEHNTDTRVHFDVLLPEENMKISQQEGLMKMFKLTT 989

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLF+ +G+IKKY   EQILEEF+HLRLD Y KRKK  +DNLE E++KL+NK R
Sbjct: 990  TISTSNMHLFNAKGVIKKYDTPEQILEEFFHLRLDYYGKRKKVLLDNLELELLKLDNKAR 1049

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADS-EETGDSSERTD 1976
            FIL V+N E+VV+++K+A LV EL +KGF P PKK+K+VE+A+ GA   +E G+ S    
Sbjct: 1050 FILGVVNGEIVVSKRKRADLVLELRDKGFTPFPKKSKNVEAALAGATPVDEEGEESP--- 1106

Query: 1977 PQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSK 2156
                +V+ +G+  SDYDYLLSM+I TLT EK++ELC+EKDK+  ++ E++ LTPK+LW K
Sbjct: 1107 ----EVDDRGINASDYDYLLSMAIGTLTIEKVQELCAEKDKLEHDVKELRGLTPKALWIK 1162

Query: 2157 DLDALEGALDEQDKHDAHKAEEDLRQA---GAKASKQPARKPRKAAPKNVSSESAVGSSM 2327
            DLDA    LD +   +A   E +L       AK  +Q  + PRK   K   +E      +
Sbjct: 1163 DLDAFLAQLDAEAVQEAKDDEYELNNMVSDAAKIFRQVGKNPRKNTKKPAPAEH-----V 1217

Query: 2328 TTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIES 2507
             T AS      VA +                    V            L ARLA YNIES
Sbjct: 1218 DTDASDTTTTEVAAK------PKKRAPKKAPTKKKVDVEDMEDDLLLDLNARLAKYNIES 1271

Query: 2508 DNSPVNESKEQDAPAATKNPRKNA 2579
              SP +   E D P   + P K A
Sbjct: 1272 --SPEHADMETDLP-ERREPSKRA 1292


>ref|XP_002298421.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550348289|gb|EEE83226.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1485

 Score = 1023 bits (2645), Expect = 0.0
 Identities = 556/1015 (54%), Positives = 698/1015 (68%), Gaps = 37/1015 (3%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAM---AGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNL 173
            KCTLILTEGDSAKALA+   AGL    R +YGVFPL+GK+LNVREAT KQ+ EN EI+ +
Sbjct: 447  KCTLILTEGDSAKALAVTGVAGLTQTERSFYGVFPLRGKLLNVREATPKQLKENKEIECI 506

Query: 174  KQILGLQQAKTYESVNSLRYGHLMIMTDQ-------------DHDGSHIKGLIINFIHAF 314
            K+ILGLQ  K Y +V SLRYGHLMIMTDQ             DHDGSHIKGL+INF+H+F
Sbjct: 507  KKILGLQHHKQYSNVKSLRYGHLMIMTDQAKERFANFLCFKQDHDGSHIKGLLINFLHSF 566

Query: 315  WPSLLKIPSFVVEFVTPLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGL 494
            WPSLLK+PSF+VEF+TP++KAT+ RN  VL+FYSM EYE+W  SL GN +GW+IKYYKGL
Sbjct: 567  WPSLLKVPSFLVEFITPIVKATH-RNGTVLSFYSMPEYESWKGSLAGNASGWSIKYYKGL 625

Query: 495  GTSSSTEGKEYFKDLDRHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLD 674
            GTS+S EGK YF+ LD+HKKDF+W  D QD DAIELAFSKKKIEARKNWLRQYEPG+ LD
Sbjct: 626  GTSTSKEGKAYFQSLDKHKKDFIWM-DEQDGDAIELAFSKKKIEARKNWLRQYEPGTHLD 684

Query: 675  SKDKYIKYTDFVHKELIQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQF 854
               K IKY+DF++KELI FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN VKE KISQF
Sbjct: 685  QNQKLIKYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKISQF 744

Query: 855  GGYVAEKSAYHHGDQSLYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYIN 1034
             GYV+E SAYHHG+QSL STIIGMAQDFVGSNNINL  P+GQFGTR  GGKDHAS RYI 
Sbjct: 745  SGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRSVGGKDHASARYIY 804

Query: 1035 TCLEHISRFLFPKEDDVLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNF 1214
            T L  I+RFLFPK+DD LLDYL EDG ++EP+WY PIIPMVLVNG EGIGTGWS++IPN+
Sbjct: 805  TQLSPITRFLFPKDDDGLLDYLDEDGQTIEPNWYMPIIPMVLVNGCEGIGTGWSTFIPNY 864

Query: 1215 NPRDIIANIRSLLNDETTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRI 1391
            NPRDI+ANIR LLN E   PM+PWYRGFKG +EK ++KE G +YTV+G+I E++E TLRI
Sbjct: 865  NPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASKEAGCSYTVNGVINEVNETTLRI 924

Query: 1392 TELPVRRWTQDYKQFLESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKL 1571
            TELP+RRWT DYK FL S+ E N + ++G+  K+ FIKDFR +  D    FE+ +  E +
Sbjct: 925  TELPIRRWTDDYKAFLNSVTEGN-RDENGNLPKDPFIKDFRKYGDDATVVFEVLLSEENM 983

Query: 1572 LMAKHEGLMKKFKLTTSMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYY 1751
            ++AK EGL+KKFKLTT++ST+NMHLFD  G+IKKY + EQILEEF+HLRL+ YE+RKK  
Sbjct: 984  MIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPEQILEEFFHLRLEYYERRKKVL 1043

Query: 1752 VDNLEKEVIKLENKVRFILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVV 1931
            ++NLE E++KLENKVRFIL V+  E++VN +K+A L  EL +KGF PIPKK+K+V   V 
Sbjct: 1044 LENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFLELHQKGFTPIPKKSKAV---VA 1100

Query: 1932 GADSEETGDSSERTDPQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQE 2111
            GA  ++        D  ++ +   G+R SDYDYLLSM+I TLT EK+++LC++ DK++ E
Sbjct: 1101 GATDDK--------DEAEDSLEVSGVRASDYDYLLSMAIGTLTLEKVQQLCADHDKLNGE 1152

Query: 2112 LDEMKKLTPKSLWSKDLDALEGALDEQDKHDAHKAEEDLR--------QAGAKASKQPAR 2267
            +D ++K TP  LW KDL+ALE  LD  DK+DA +AEE  +        +AG K SKQ  +
Sbjct: 1153 VDNLRKTTPIVLWVKDLEALEMQLDVLDKYDA-EAEEARKKLKGDANGEAGFKVSKQAPK 1211

Query: 2268 KPRKAAPKNVSSESAVGSSMTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXX 2447
             PRK   K ++ E +V +    ++S M+ +N A EVV                       
Sbjct: 1212 NPRKYTKKAINEEVSVETMGKASSSAMETENAA-EVVKPKGRAGSRKAPAKKQEKPSPIS 1270

Query: 2448 XXXXXXXPLRARLAAYNIES--DNSPVNESKEQDAPAATKNPRKN-----AXXXXXXXXX 2606
                    L+ RL AY ++S  + S   E++    PA  K  RK      +         
Sbjct: 1271 DEDDEIESLKDRLKAYRLDSSPEQSADMETEVLRVPAGRKAARKKPLAAVSVISDSEDEP 1330

Query: 2607 XXXXXFEVE-EVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVL 2783
                 F+V+ +  P                                QSQ +GQ+L+T++L
Sbjct: 1331 DLDDDFDVQVKAVPETKKKGGRKAAAANDKAAKPPAATKRRGPASKQSQGLGQQLLTEML 1390

Query: 2784 KXXXXXXXXXXXXXXXRRMRASPFNKKSSSVLGRKQQEEE---DASPASEG-NAD 2936
            K               R+MRASPFNKKS S+LG   + ++   +  PAS   NAD
Sbjct: 1391 K--PAEESGISPEKKVRKMRASPFNKKSGSLLGGIHKGDDTGIETMPASTSENAD 1443


>ref|XP_002314046.2| DNA topoisomerase family protein [Populus trichocarpa]
            gi|550331162|gb|EEE88001.2| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 1482

 Score = 1020 bits (2638), Expect = 0.0
 Identities = 553/1011 (54%), Positives = 701/1011 (69%), Gaps = 26/1011 (2%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVG---RDYYGVFPLKGKMLNVREATHKQILENAEIQNL 173
            KCTLILTEGDSAKALA+AG+A +    R++YGVFPL+GK+LNVREAT KQ+ EN EI+++
Sbjct: 446  KCTLILTEGDSAKALAIAGVAGLSQMERNFYGVFPLRGKLLNVREATSKQLKENKEIESI 505

Query: 174  KQILGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVE 353
            K+ILGLQ  K Y +V SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VE
Sbjct: 506  KKILGLQHDKQYSNVKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVE 565

Query: 354  FVTPLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFK 533
            F+TP++KAT+ RN  VL+FYSM EYE W ESL GN +GW+IKYYKGLGTS+S EGK+YFK
Sbjct: 566  FITPIVKATH-RNGTVLSFYSMPEYEYWKESLSGNASGWSIKYYKGLGTSTSKEGKDYFK 624

Query: 534  DLDRHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVH 713
            +L +HKKDF+W  D  D DAIELAFSKKKIEARKNWLRQ+EPG+ LD   K IKY+DF++
Sbjct: 625  NLHKHKKDFLWM-DELDGDAIELAFSKKKIEARKNWLRQHEPGTHLDHNQKIIKYSDFIN 683

Query: 714  KELIQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHG 893
            KELI FS+ADLQRSIPS++DGLKPGQRK+LFC+FKRN VKE K+SQF GYV+E SAYHHG
Sbjct: 684  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVSQFSGYVSEHSAYHHG 743

Query: 894  DQSLYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPK 1073
            +QSL  TIIGMAQDFVGSNNINL +P+GQFGTR  GGKDHAS RYI T L  I+RFLFPK
Sbjct: 744  EQSLAGTIIGMAQDFVGSNNINLLQPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPK 803

Query: 1074 EDDVLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLL 1253
            +DD LL+YL EDG ++EP+WY PIIP VLVNG EGIGTGWS++IPN+NPRD++ANIR LL
Sbjct: 804  DDDGLLNYLDEDGQTIEPTWYMPIIPTVLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLL 863

Query: 1254 NDETTVPMDPWYRGFKGIMEK-STKEGG-FTYTVSGIIEEIDECTLRITELPVRRWTQDY 1427
            N E   PM+PWYRGFKG +EK ++KEGG  +YTV+G+I E++E TLRITELP+RRWT DY
Sbjct: 864  NGEMMEPMNPWYRGFKGTIEKGASKEGGCSSYTVNGVINEVNETTLRITELPIRRWTDDY 923

Query: 1428 KQFLESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKF 1607
            K FL S+ E   + ++G+  K+ F+KDFR +  D    FE+ +  E +L+AK EGL+KKF
Sbjct: 924  KAFLNSVTEGT-RDENGNLPKDPFVKDFRKYGDDAAVHFEVQLSEENMLVAKQEGLLKKF 982

Query: 1608 KLTTSMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLE 1787
            KLTT++ST+NMHLFD  G+IKKY + EQILE F+HLRL+ YE RKK  ++NLE E++KLE
Sbjct: 983  KLTTTISTSNMHLFDSAGVIKKYDNPEQILENFFHLRLEYYETRKKVLLENLEFELLKLE 1042

Query: 1788 NKVRFILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSE 1967
            NKVRFIL V+  E++VN +K+A L+ EL +KGF  IPKK+K+V   V GA    T D+ E
Sbjct: 1043 NKVRFILGVVRGEIIVNNRKRADLLLELHQKGFNAIPKKSKAV---VAGA----TDDTEE 1095

Query: 1968 RTDPQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSL 2147
              D  D      G+R SDYDYLLSM+I TLT E++++LC+++DK++ E+D ++K TPK L
Sbjct: 1096 AEDSPD----VSGVRASDYDYLLSMAIGTLTLERVQQLCADRDKLNGEVDSLRKTTPKVL 1151

Query: 2148 WSKDLDALEGALDEQDKHDAHKAEEDLR---------QAGAKASKQPARKPRKAAPKNVS 2300
            W KDL+ALE  LD  D++DA +AEE  R         +AG K SKQ  + PRK   K ++
Sbjct: 1152 WVKDLEALEMQLDMLDEYDA-EAEEARRKLKGGGAKGEAGFKVSKQAPKYPRKNTKKAIN 1210

Query: 2301 SESAV---GSSMTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXT-VXXXXXXXXXXX 2468
             E +V   G+S + A      +N A  V                  + V           
Sbjct: 1211 EEVSVETTGTSSSFAIETASSENAAAVVKPKGRAGSKKAPAKMEKLSPVLDDFDEDDEIE 1270

Query: 2469 PLRARLAAYNIES--DNSPVNESKEQDAP----AATKNPRKN-AXXXXXXXXXXXXXXFE 2627
             L+ RL AY ++S  + S   E+     P    AA K P  N +               +
Sbjct: 1271 SLKDRLNAYRLDSSPEQSADMETDVLQVPARRGAARKKPLANVSVISDSEDEPNLDDDAD 1330

Query: 2628 VE-EVAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXXX 2804
            VE +  P                                QSQ +GQKL+T++LK      
Sbjct: 1331 VEVKALPETKKKGGRKAAAANDKAAKPPAATKRRGPASQQSQGLGQKLLTEMLK--PAEG 1388

Query: 2805 XXXXXXXXXRRMRASPFNKKSSSVLGRKQQEEEDASPASEGNADSNSAALE 2957
                     R++RASPFNKKS SVLGR  +E++  S     ++  N+  ++
Sbjct: 1389 AGISPEKKVRKVRASPFNKKSGSVLGRIHKEDDTGSEPMSASSSENTDVID 1439


>ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
            gi|223543074|gb|EEF44609.1| DNA topoisomerase II,
            putative [Ricinus communis]
          Length = 1212

 Score = 1016 bits (2627), Expect = 0.0
 Identities = 529/1008 (52%), Positives = 691/1008 (68%), Gaps = 21/1008 (2%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVG---RDYYGVFPLKGKMLNVREATHKQILENAEIQNL 173
            KCTLILTEGDSAK LA++GL  +    RD YGVFPL+GK+LNVREAT KQ+ EN EI+++
Sbjct: 161  KCTLILTEGDSAKTLAISGLGALPQDVRDLYGVFPLRGKLLNVREATPKQLNENKEIESI 220

Query: 174  KQILGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVE 353
            K+ILGLQQ K Y+SV  LRYGHLMIMTDQD+DGSHIKGL+INFI+ FWPSLLKIPSF+VE
Sbjct: 221  KKILGLQQNKQYDSVKPLRYGHLMIMTDQDYDGSHIKGLLINFIYYFWPSLLKIPSFLVE 280

Query: 354  FVTPLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFK 533
            F+TP++KAT+ R+ ++L+FY+M EY +W ESL GN  GWTIKYYKGLGT+   EG +YF+
Sbjct: 281  FITPIVKATH-RSGKILSFYTMPEYYSWKESLMGNANGWTIKYYKGLGTNDKKEGMQYFR 339

Query: 534  DLDRHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVH 713
            D+D+H+KDFVW N+ +D  AIELAFSKKK++ RKNWLR ++PG+ L+ K+K IKY+DF++
Sbjct: 340  DIDKHQKDFVWMNE-EDGTAIELAFSKKKVDERKNWLRHFQPGTHLEQKNKLIKYSDFIN 398

Query: 714  KELIQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHG 893
            KELI FS+ADLQRSIPS++DGLKP QRK+LF  FKRNLVK+ K+ Q  GYV+E+SAYHHG
Sbjct: 399  KELILFSVADLQRSIPSMVDGLKPAQRKILFSCFKRNLVKDLKVVQLQGYVSEQSAYHHG 458

Query: 894  DQSLYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPK 1073
            +QSL STI+GMAQ+FVGSNNINL  P GQFGTRC GGKDHASPRYI TCL  I+RFLFPK
Sbjct: 459  EQSLQSTIVGMAQNFVGSNNINLLAPKGQFGTRCSGGKDHASPRYIYTCLSPITRFLFPK 518

Query: 1074 EDDVLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLL 1253
            +DD LLDYL+EDG+S+EP+WYAPIIP+VLVNG EGIGTGWS++IPN+NPRDI+AN+R  L
Sbjct: 519  DDDCLLDYLQEDGLSIEPTWYAPIIPLVLVNGCEGIGTGWSTFIPNYNPRDIVANLRRFL 578

Query: 1254 NDETTVPMDPWYRGFKGIMEKS-TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYK 1430
            N E   PM PWY+GFKG +EKS +KEGG +Y V+GIIEE++E T+RITELP+RRWT +YK
Sbjct: 579  NGEKMEPMHPWYKGFKGTIEKSASKEGGGSYAVNGIIEEVNETTVRITELPIRRWTDEYK 638

Query: 1431 QFLESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFK 1610
             FL S+IE N + + G+  K+ FIKDFR +  D    FE+ +  EK+   K EGL+KKFK
Sbjct: 639  DFLNSVIE-NVRDEKGNLPKDAFIKDFRKYGDDVSVCFEVLLSEEKMKQVKDEGLLKKFK 697

Query: 1611 LTTSMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLEN 1790
            L T++ST+NMHLFDP+G+IKKY   E+ILEEF HLR +LYEKRK + + +LE E + LEN
Sbjct: 698  LATTISTSNMHLFDPKGVIKKYDSPEEILEEFVHLRFELYEKRKNFKLASLEMEALILEN 757

Query: 1791 KVRFILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSER 1970
            KVRFIL V+  E++VN +K+A L+ EL +KGF P PK  K VE+ V GA      D+ E 
Sbjct: 758  KVRFILGVVTGEIIVNNRKRAELLLELRQKGFTPFPKN-KPVEAVVAGA----ADDTEES 812

Query: 1971 TDPQDEQVNSQ-GLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSL 2147
               +D + NS+ G++ +DY+YLLSMSI TLT EK+++LC++KDK+S+E++ +++  PK L
Sbjct: 813  ESTEDVEENSKTGVQATDYEYLLSMSIGTLTLEKVQKLCADKDKISEEVENLRRTAPKDL 872

Query: 2148 WSKDLDALEGALDEQDKHDAHKAEEDLR----QAGAKASKQPARKPRKAAPKNVSSESAV 2315
            W KDL+A E  LD+ D  DA + ++ ++    Q G K S+QP + PRK      ++E+A 
Sbjct: 873  WLKDLEAFESQLDKLDAEDALERQKSVKDTNGQGGFKVSRQPPKNPRKNNKTAKNTEAAA 932

Query: 2316 GSSMTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAY 2495
                 T+ S M+ ++V++EV                                L+ RL AY
Sbjct: 933  EIMGQTSNSAMETESVSEEVKPKGRAASKKAPAKKQEKPTPISDDEDDEVEALKDRLKAY 992

Query: 2496 NIES--DNSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFE----------VEEV 2639
             ++S  + S   E+     PA  +  ++ A               E          VE V
Sbjct: 993  RLDSSPEQSTTMETDMPQVPARKETSKRAAAQKKPVATISELSESEDEVDLDDESDVEVV 1052

Query: 2640 APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSQVIGQKLITDVLKXXXXXXXXXXX 2819
                                              +SQ +GQKL+T++LK           
Sbjct: 1053 PVPEAKKKGGRKPAANSRAAKPPAGTKKRGPTKKESQGLGQKLLTEMLK--PAENPGISP 1110

Query: 2820 XXXXRRMRASPFNKKSSSVLGRKQQEEEDASPASEGNADSNSAALESV 2963
                R+MRASPFNKKS SVLGR  +  E         + S S+ +E +
Sbjct: 1111 EKKVRKMRASPFNKKSGSVLGRVAKGSEATGSEEMSGSTSTSSNMEEI 1158


>dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score = 1008 bits (2605), Expect = 0.0
 Identities = 535/990 (54%), Positives = 665/990 (67%), Gaps = 7/990 (0%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALA+AGL+VVGRD+YGVFPL+GK+LNVREA+H Q++ N EIQ++KQI
Sbjct: 457  KCTLILTEGDSAKALAIAGLSVVGRDHYGVFPLRGKLLNVREASHNQLMHNLEIQHIKQI 516

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQ  K YESV  LRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF++ F+T
Sbjct: 517  LGLQHGKQYESVKPLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLLGFIT 576

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KA +K  ++ L+FY+M +YEAW E+       WT+KYYKGLGTS+  E  EYF DL 
Sbjct: 577  PIVKARHKDGKRKLSFYTMPQYEAWKEAQGTEAKNWTVKYYKGLGTSTDQEAMEYFSDLG 636

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +H+KDFV+  D +D DAIELAFSKKKIEARK WLRQ+EPG+ LD +D +IKY DFVHKEL
Sbjct: 637  KHEKDFVYV-DGEDDDAIELAFSKKKIEARKGWLRQFEPGTFLDDRDSHIKYRDFVHKEL 695

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FSIAD+QRSIPS++DGLKPGQRK+LFC+FKRN V+E K++QF GYV+E SAYHHG+QS
Sbjct: 696  ILFSIADVQRSIPSMVDGLKPGQRKILFCSFKRNFVREAKVAQFSGYVSEHSAYHHGEQS 755

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L  TIIGMAQD+VGSNNINL  P GQFGTR QGGKDHAS RY+ T L  ++RFLFPK DD
Sbjct: 756  LAGTIIGMAQDYVGSNNINLLLPIGQFGTRGQGGKDHASARYVFTQLSPVTRFLFPKADD 815

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
            +LLDYL EDG S+EP+WY PIIPMVLVNGSEGIGTGWSSY+PN+NP DIIANIR LLNDE
Sbjct: 816  ILLDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGTGWSSYVPNYNPVDIIANIRHLLNDE 875

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
             T PM PWY+GF G +EK +TKE G +YTVSGIIEE+D+ TL I ELP+RRWTQDYK+FL
Sbjct: 876  ATEPMHPWYKGFLGSVEKTATKEAGASYTVSGIIEEVDDTTLCIKELPIRRWTQDYKEFL 935

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ES+   NDK KD       FI+  RD+S   +  F + M PEKL  AK EGL+KKFKLTT
Sbjct: 936  ESVSAENDKSKD------PFIEGCRDYSGSELVNFLVGMKPEKLEAAKREGLLKKFKLTT 989

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            S+ST NMHLFD +G+IKKY   EQILEEF+++RL+LYEKRKK  +D LE +++K +NK R
Sbjct: 990  SISTCNMHLFDSKGVIKKYDTPEQILEEFFYIRLELYEKRKKVLLDILEHDMLKCDNKYR 1049

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FI  V+   ++V+ +K+  +  EL EKGF P PKK    E A+ GA      D  E T+ 
Sbjct: 1050 FIRCVVEGSIIVSNRKRTDVFRELKEKGFTPFPKKKNRAEVAIAGAT-----DDGEETEE 1104

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
              E   + G+  SDYDYLLS++I TLT EK++EL +E+DK+ QE++E+K+ T +SLW+KD
Sbjct: 1105 NSEVPIAPGVSSSDYDYLLSLAIGTLTTEKMQELRAERDKLMQEVEELKQSTARSLWNKD 1164

Query: 2160 LDALEGALDEQDKHDAHKAEEDLRQAGAKAS-----KQPARKPRKAAPKNVSSESAVGSS 2324
            LDALE  L E+ K      E++ R+   K       ++  RK +K   K  + E  +  +
Sbjct: 1165 LDALEDKLAEEQKIYEETWEKNKRKIHGKTDTLEIIQKNPRKNKKTTKKESAVEMEISEN 1224

Query: 2325 MTTAASVMDIDNVAQEVVXXXXXXXXXXXXXXXXXTVXXXXXXXXXXXPLRARLAAYNIE 2504
             TT     + D   ++                                 LR R+AAYN +
Sbjct: 1225 TTT-----ETDVKIKKPRGKAAAKKKEPAAKVVTAAPVEEQEDDDGIADLRQRIAAYNFD 1279

Query: 2505 SDNSPVNESKEQDAPAATKNPRKNAXXXXXXXXXXXXXXFEVEEVAPXXXXXXXXXXXXX 2684
            S      +   + AP  TKN  K                 E +E                
Sbjct: 1280 SSPDHSEDMATEVAPVQTKN--KQPARRGAAQKKTLSAASETDEDDDAFEPEEKKKKGGR 1337

Query: 2685 XXXXXXXXXXXXXXXXXXXQ-SQVIGQKLITDVLKXXXXXXXXXXXXXXXRRMRASPFNK 2861
                               Q SQ++GQKLIT+VLK               RRMR SPFNK
Sbjct: 1338 KPAAAKAPAAAKKRGPSAKQSSQLVGQKLITEVLK----PAADDSPEKKVRRMRESPFNK 1393

Query: 2862 KSSSVLGRKQQEEEDASPASEGNADSNSAA 2951
            KSSS+LG+    ++D    + G +  N  A
Sbjct: 1394 KSSSILGKTINIDDDDEEETSGTSSMNEGA 1423


>ref|XP_006296839.1| hypothetical protein CARUB_v10012826mg [Capsella rubella]
            gi|482565548|gb|EOA29737.1| hypothetical protein
            CARUB_v10012826mg [Capsella rubella]
          Length = 1284

 Score =  993 bits (2567), Expect = 0.0
 Identities = 499/799 (62%), Positives = 620/799 (77%), Gaps = 7/799 (0%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAK+LAMAG++VVG DYYGVFPL+GK+LNVREA+  QI  N EI+NLK+I
Sbjct: 449  KCTLILTEGDSAKSLAMAGVSVVGHDYYGVFPLRGKLLNVREASTTQITNNKEIENLKKI 508

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGL+Q   YE+VNSLRYGH+MIMTDQDHDGSHIKGL+INFIH+FWPSLLK+PSF+VEF+T
Sbjct: 509  LGLKQHMKYENVNSLRYGHMMIMTDQDHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFIT 568

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KATNK+ ++VL+FYSM EYE W ESL GN TGW IKYYKGLGTS + EGKEYF +L 
Sbjct: 569  PIVKATNKKTKRVLSFYSMPEYEDWKESLRGNATGWEIKYYKGLGTSDAKEGKEYFSNLS 628

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDFVW  D QD +AIELAFSKKKIEARKNWL  Y PG+ LD K+  I Y+DFV+KEL
Sbjct: 629  LHKKDFVWE-DEQDGEAIELAFSKKKIEARKNWLSNYVPGTHLDQKEPKITYSDFVNKEL 687

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRK+LF AFK+NLVKE K++QF GYVAE SAYHHG+QS
Sbjct: 688  ILFSMADLQRSIPSMVDGLKPGQRKILFSAFKKNLVKEMKVAQFSGYVAEHSAYHHGEQS 747

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD++GSNNINL +P GQFGTR  GGKD AS RYI T L   +R L+PK+DD
Sbjct: 748  LGSTIIGMAQDYLGSNNINLLKPKGQFGTRASGGKDAASTRYIFTVLSPATRVLYPKDDD 807

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
            VLLDYL EDG  +EP+WY PIIP VLVNGSEGIGTGWS++IPN+NPR+I+ANIR L+N E
Sbjct: 808  VLLDYLNEDGQKIEPTWYMPIIPTVLVNGSEGIGTGWSTFIPNYNPREIVANIRRLINGE 867

Query: 1263 TTVPMDPWYRGFKGIMEKS-TKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
            + VPMDPWYRGFKG +EKS +KEGG TYT+SG+ EE+D+ T+RITELP+RRWT DYKQFL
Sbjct: 868  SVVPMDPWYRGFKGTIEKSASKEGGCTYTISGLYEEVDDTTIRITELPIRRWTDDYKQFL 927

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ES+   N  P         FI+D R ++      F+I +  E +L A+ EG +KKFKLTT
Sbjct: 928  ESMKADNGAP---------FIQDIRAYNDHASVDFDIKLSEENMLEARQEGFLKKFKLTT 978

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKYA  EQILEEF+ LR + YEKRK+  + N+E E++KLENKV+
Sbjct: 979  TISTSNMHLFDKKGVIKKYASPEQILEEFFDLRNEYYEKRKETMLKNMELELLKLENKVK 1038

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGA--DSEETGDSSERT 1973
            FIL V++ E++VN +KKA LV EL ++GF P PKK   VE+AV GA   +EE+ +SS   
Sbjct: 1039 FILGVLSGEIIVNNRKKADLVEELRQRGFTPFPKKIMPVEAAVAGAIDAAEESEESS--V 1096

Query: 1974 DPQDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWS 2153
            DP D       +  S+YDYLL+M+I +LT EK++ELC ++DK+ + +++++K TP++LW 
Sbjct: 1097 DPVDSA--DAYIPGSEYDYLLAMAIGSLTIEKVQELCEDRDKMLEAVEDLRKTTPRALWL 1154

Query: 2154 KDLDALEGALDEQDKHDAH-KAEEDLRQAGAKASKQPARKPRKAAPKNVSSESA---VGS 2321
            +DLD+L+  LD+ D+ DA  + E  + Q   +A      K RK APK   ++     V  
Sbjct: 1155 RDLDSLDKELDKLDQADAKAEIERKVAQEKIRAKSGAPLKGRKQAPKKPVAKKTTKKVSE 1214

Query: 2322 SMTTAASVMDIDNVAQEVV 2378
            S TT AS MD D    EVV
Sbjct: 1215 SETTEASAMDTDYNVAEVV 1233


>ref|XP_006412895.1| hypothetical protein EUTSA_v10024219mg [Eutrema salsugineum]
            gi|557114065|gb|ESQ54348.1| hypothetical protein
            EUTSA_v10024219mg [Eutrema salsugineum]
          Length = 1427

 Score =  990 bits (2560), Expect = 0.0
 Identities = 489/801 (61%), Positives = 619/801 (77%), Gaps = 10/801 (1%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            KCTLILTEGDSAKALAMAGL  VGRDYYGVFPL+GK+LNVREA+  QI  N EI+N+K+I
Sbjct: 451  KCTLILTEGDSAKALAMAGLGEVGRDYYGVFPLRGKLLNVREASTTQITNNKEIENIKKI 510

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGL+Q   YE+VNSLRYGH+MIMTDQDHDGSHIKGL+INFIH+FWP+LLK+PSF+VEF+T
Sbjct: 511  LGLKQNMVYENVNSLRYGHMMIMTDQDHDGSHIKGLLINFIHSFWPTLLKVPSFLVEFIT 570

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KA+N R + VL+FYSM EYE W ESL GN TGWTIKYYKGLGTS+S EGKEYFK LD
Sbjct: 571  PIVKASNNRTKTVLSFYSMPEYEEWKESLRGNATGWTIKYYKGLGTSTSKEGKEYFKRLD 630

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
             HKKDFVW  D QD +AIELAFSKKKIEARKNWL  +E G+ LD K++ I Y+DFV+KEL
Sbjct: 631  LHKKDFVWE-DEQDGEAIELAFSKKKIEARKNWLSNFEAGTHLDQKEQKITYSDFVNKEL 689

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADLQRSIPS++DGLKPGQRKVLFC+FKRN +KE K++QF GYV+E SAYHHG+QS
Sbjct: 690  ILFSMADLQRSIPSMVDGLKPGQRKVLFCSFKRNFIKEAKVAQFAGYVSEHSAYHHGEQS 749

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQD+VGSNNINL +P GQ+GTR  GGKD AS RYI T L   +R LFPK+DD
Sbjct: 750  LASTIIGMAQDYVGSNNINLLQPIGQYGTRTAGGKDAASARYIFTKLSPATRVLFPKDDD 809

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
            VLL+YL EDG  +EP+WY PIIP VLVNG EGIGTGWS++IPN+NPR+I+AN+R LLN E
Sbjct: 810  VLLNYLNEDGQKIEPTWYMPIIPTVLVNGCEGIGTGWSTFIPNYNPREIVANVRRLLNGE 869

Query: 1263 TTVPMDPWYRGFKGIMEK-STKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
            + VPM PWYRGFKG +EK ++KEGG TYT++G+ EEIDE T+RITELP+RRWT DYK+FL
Sbjct: 870  SMVPMHPWYRGFKGTIEKTASKEGGSTYTITGVCEEIDETTVRITELPIRRWTDDYKEFL 929

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
             ++  +N+            I+++ D S+     FE++M  E + +A+ EG +K FKLTT
Sbjct: 930  NALKTNNE------------IREYHDESS---VHFELTMSEENMAIARQEGFLKMFKLTT 974

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ TTNMHLFD + +IKKYA  EQILEEF+ LRL  YEKRKK  ++N+E E++K+ENKV+
Sbjct: 975  TVGTTNMHLFDEKSVIKKYATPEQILEEFFDLRLQYYEKRKKIMLENMELELLKIENKVK 1034

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V++ E++VN +KKA LV EL ++GF P PKKAK VE+AV GA   +T + +    P
Sbjct: 1035 FILGVVSGEIIVNNRKKADLVQELRQRGFTPFPKKAKPVEAAVAGAVDADTTEENSDAAP 1094

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
                 +S  +  S+YDYLL+++I TLT EK++ELC ++DK+ +E++++KK TP+SLW +D
Sbjct: 1095 ASSS-SSTFITGSEYDYLLALAIATLTLEKVQELCGDRDKMKEEVEDLKKATPRSLWLRD 1153

Query: 2160 LDALEGALDEQDKHDAHKAEEDLRQA---------GAKASKQPARKPRKAAPKNVSSESA 2312
            L +L+  LD+ D  DA   EE  R+A         GA A  +  +  +K APK  + ++ 
Sbjct: 1154 LASLDVELDKLDLSDAQAEEE--RKATQIRLRAGNGAPAKGRKQQVTKKPAPKKTTKKAI 1211

Query: 2313 VGSSMTTAASVMDIDNVAQEV 2375
               +  T++S MD +N   EV
Sbjct: 1212 ESETTETSSSAMDTENTVVEV 1232


>ref|XP_001758663.1| predicted protein [Physcomitrella patens] gi|162690273|gb|EDQ76641.1|
            predicted protein [Physcomitrella patens]
          Length = 1238

 Score =  989 bits (2556), Expect = 0.0
 Identities = 487/773 (63%), Positives = 619/773 (80%), Gaps = 4/773 (0%)
 Frame = +3

Query: 3    KCTLILTEGDSAKALAMAGLAVVGRDYYGVFPLKGKMLNVREATHKQILENAEIQNLKQI 182
            +CTLILTEGDSAKALAM+G++VVGRD YGVFPL+GK+LNVREA+HKQI+ENAEI N+K+I
Sbjct: 451  QCTLILTEGDSAKALAMSGISVVGRDKYGVFPLRGKLLNVREASHKQIMENAEITNIKRI 510

Query: 183  LGLQQAKTYESVNSLRYGHLMIMTDQDHDGSHIKGLIINFIHAFWPSLLKIPSFVVEFVT 362
            LGLQ  K Y++  SLRYGHLMIMTDQDHDGSHIKGL+INFIH+FWPSLLKIPSF+VEF+T
Sbjct: 511  LGLQHGKDYDNTKSLRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 570

Query: 363  PLLKATNKRNRQVLAFYSMHEYEAWVESLHGNVTGWTIKYYKGLGTSSSTEGKEYFKDLD 542
            P++KA+NK+  ++L+FY+M EYEAW ESL+G   GWTIKYYKGLGTS+S EGKEYF++L 
Sbjct: 571  PIVKASNKQ--KMLSFYTMPEYEAWKESLNGETKGWTIKYYKGLGTSTSKEGKEYFRELS 628

Query: 543  RHKKDFVWSNDSQDTDAIELAFSKKKIEARKNWLRQYEPGSGLDSKDKYIKYTDFVHKEL 722
            +HKKDF W ++  D DAIE+AFSKKKIEARK WLR YEPG+ LD     IKY+DFV+KEL
Sbjct: 629  KHKKDFKWESE-MDGDAIEMAFSKKKIEARKTWLRHYEPGTFLDMTADKIKYSDFVNKEL 687

Query: 723  IQFSIADLQRSIPSVMDGLKPGQRKVLFCAFKRNLVKETKISQFGGYVAEKSAYHHGDQS 902
            I FS+ADL RSIPS++DGLKPGQRK+LFC FKRN V + K++QF GYV+E SAYHHG+ S
Sbjct: 688  ILFSMADLARSIPSMVDGLKPGQRKILFCCFKRNFVTQAKVAQFSGYVSEHSAYHHGEAS 747

Query: 903  LYSTIIGMAQDFVGSNNINLFEPDGQFGTRCQGGKDHASPRYINTCLEHISRFLFPKEDD 1082
            L STIIGMAQ+FVGSNNINL  P+GQFGTR QGGK+HASPRYI TCL  I+R LFP+ DD
Sbjct: 748  LASTIIGMAQNFVGSNNINLLSPEGQFGTREQGGKNHASPRYIFTCLAPITRALFPQPDD 807

Query: 1083 VLLDYLREDGISVEPSWYAPIIPMVLVNGSEGIGTGWSSYIPNFNPRDIIANIRSLLNDE 1262
            VLLDY++EDG S+EPSWY PIIP+VLVNGSEGIGTGWSS++PN+NPR+I+ANIR LL  +
Sbjct: 808  VLLDYMKEDGQSIEPSWYCPIIPLVLVNGSEGIGTGWSSFVPNYNPREIVANIRRLLAGQ 867

Query: 1263 TTVPMDPWYRGFKGIME-KSTKEGGFTYTVSGIIEEIDECTLRITELPVRRWTQDYKQFL 1439
               PM PWY+ F G +E  +TK+ G TYT++G IE+IDE T++I ELPVR+WTQDYK+FL
Sbjct: 868  ELTPMHPWYKSFMGTIECSATKDIGLTYTITGTIEQIDETTIKILELPVRKWTQDYKEFL 927

Query: 1440 ESIIESNDKPKDGDKVKERFIKDFRDHSTDTIARFEISMDPEKLLMAKHEGLMKKFKLTT 1619
            ++++  +DK       KE FIKDFR+H+TDT   FE+++  E + +A  EGL+KKFKLTT
Sbjct: 928  DALMTPSDKN------KEPFIKDFREHNTDTKVHFELTLSEENMAIALAEGLVKKFKLTT 981

Query: 1620 SMSTTNMHLFDPRGLIKKYADAEQILEEFYHLRLDLYEKRKKYYVDNLEKEVIKLENKVR 1799
            ++ST+NMHLFD +G+IKKY   EQILEEF+H+RLDLY KRK   + NL+ E++K++NKVR
Sbjct: 982  TISTSNMHLFDAKGIIKKYDTPEQILEEFFHIRLDLYVKRKAVQLQNLQYELVKVDNKVR 1041

Query: 1800 FILAVINEEVVVNRKKKAALVSELWEKGFAPIPKKAKSVESAVVGADSEETGDSSERTDP 1979
            FIL V+  E++VN +K+  L+SEL  KGFAP PKKAKS +  VVGA      D     + 
Sbjct: 1042 FILGVVKGEIIVNNRKRIDLLSELQHKGFAPFPKKAKSPDPPVVGA------DPLPEDNE 1095

Query: 1980 QDEQVNSQGLRVSDYDYLLSMSIVTLTYEKIEELCSEKDKVSQELDEMKKLTPKSLWSKD 2159
            QDE+V  +G++V+DYDYLLSM I +LTYEK+++L  ++DK+ +E++E+K+ TP++LW KD
Sbjct: 1096 QDEKV--KGVKVADYDYLLSMPIGSLTYEKVQQLRGQRDKMEEEVEELKRATPEALWIKD 1153

Query: 2160 LDALEGALDEQDKHDAHKAEEDLRQAGAKASKQPARKP---RKAAPKNVSSES 2309
            LD     LD Q++ +A  A  + + + AK   Q  +KP   ++AAPK    ES
Sbjct: 1154 LDEFLVKLDAQEEQEAIDAVYEAKHS-AKEGNQTFKKPAPRKQAAPKVKKVES 1205