BLASTX nr result
ID: Rheum21_contig00008328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00008328
(384 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322414.1| ribosomal protein S13 [Populus trichocarpa] ... 98 1e-18
gb|ABK23173.1| unknown [Picea sitchensis] 98 1e-18
ref|XP_006421742.1| hypothetical protein CICLE_v10006145mg [Citr... 97 2e-18
ref|XP_006421743.1| hypothetical protein CICLE_v10006145mg [Citr... 97 2e-18
ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [C... 97 2e-18
ref|XP_002510918.1| 40S ribosomal protein S13, putative [Ricinus... 97 2e-18
gb|ESW27579.1| hypothetical protein PHAVU_003G214600g [Phaseolus... 96 5e-18
gb|EOX96230.1| Ribosomal protein S13A [Theobroma cacao] gi|50877... 96 5e-18
gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK4889... 96 5e-18
ref|XP_002509604.1| 40S ribosomal protein S13, putative [Ricinus... 96 5e-18
gb|ESW06862.1| hypothetical protein PHAVU_010G082900g [Phaseolus... 96 7e-18
ref|XP_004153746.1| PREDICTED: 40S ribosomal protein S13-like [C... 96 7e-18
ref|XP_004145064.1| PREDICTED: 40S ribosomal protein S13-like [C... 96 7e-18
ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis ... 96 7e-18
ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max] gi|3... 95 8e-18
gb|ACU18555.1| unknown [Glycine max] 95 8e-18
ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis ... 95 8e-18
gb|EXB89496.1| 40S ribosomal protein S13 [Morus notabilis] 95 1e-17
gb|EPS68200.1| hypothetical protein M569_06571 [Genlisea aurea] 95 1e-17
ref|XP_004511653.1| PREDICTED: 40S ribosomal protein S13-like [C... 95 1e-17
>ref|XP_002322414.1| ribosomal protein S13 [Populus trichocarpa]
gi|118485405|gb|ABK94559.1| unknown [Populus
trichocarpa] gi|222869410|gb|EEF06541.1| ribosomal
protein S13 [Populus trichocarpa]
Length = 151
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
S+QDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGN++LRILKAH
Sbjct: 29 SAQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNQILRILKAH 78
>gb|ABK23173.1| unknown [Picea sitchensis]
Length = 151
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/50 (96%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+KVLRILKAH
Sbjct: 29 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKVLRILKAH 78
>ref|XP_006421742.1| hypothetical protein CICLE_v10006145mg [Citrus clementina]
gi|557523615|gb|ESR34982.1| hypothetical protein
CICLE_v10006145mg [Citrus clementina]
Length = 140
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>ref|XP_006421743.1| hypothetical protein CICLE_v10006145mg [Citrus clementina]
gi|567905572|ref|XP_006445274.1| hypothetical protein
CICLE_v10022677mg [Citrus clementina]
gi|568874272|ref|XP_006490240.1| PREDICTED: 40S
ribosomal protein S13-like [Citrus sinensis]
gi|568875664|ref|XP_006490912.1| PREDICTED: 40S
ribosomal protein S13-like [Citrus sinensis]
gi|557523616|gb|ESR34983.1| hypothetical protein
CICLE_v10006145mg [Citrus clementina]
gi|557547536|gb|ESR58514.1| hypothetical protein
CICLE_v10022677mg [Citrus clementina]
Length = 151
Score = 97.4 bits (241), Expect = 2e-18
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>ref|XP_004147576.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
gi|449506113|ref|XP_004162657.1| PREDICTED: 40S
ribosomal protein S13-like [Cucumis sativus]
Length = 151
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/50 (94%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SS DVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGNK+LRILKAH
Sbjct: 29 SSTDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAH 78
>ref|XP_002510918.1| 40S ribosomal protein S13, putative [Ricinus communis]
gi|223550033|gb|EEF51520.1| 40S ribosomal protein S13,
putative [Ricinus communis]
Length = 112
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/50 (94%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVRSVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGSKILRILKAH 78
>gb|ESW27579.1| hypothetical protein PHAVU_003G214600g [Phaseolus vulgaris]
gi|561028940|gb|ESW27580.1| hypothetical protein
PHAVU_003G214600g [Phaseolus vulgaris]
Length = 151
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>gb|EOX96230.1| Ribosomal protein S13A [Theobroma cacao]
gi|508775691|gb|EOY22947.1| Ribosomal protein S13A
[Theobroma cacao]
Length = 151
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>gb|AFK48673.1| unknown [Lotus japonicus] gi|388521665|gb|AFK48894.1| unknown
[Lotus japonicus]
Length = 151
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
+SQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQVRSVTG+K+LRILKAH
Sbjct: 29 ASQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGSKILRILKAH 78
>ref|XP_002509604.1| 40S ribosomal protein S13, putative [Ricinus communis]
gi|223549503|gb|EEF50991.1| 40S ribosomal protein S13,
putative [Ricinus communis]
Length = 82
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/50 (92%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>gb|ESW06862.1| hypothetical protein PHAVU_010G082900g [Phaseolus vulgaris]
Length = 151
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
S+QDV++NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGNK+LRILKAH
Sbjct: 29 SAQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAH 78
>ref|XP_004153746.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
gi|449498912|ref|XP_004160669.1| PREDICTED: 40S
ribosomal protein S13-like [Cucumis sativus]
Length = 151
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDV +NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGNK+LRILKAH
Sbjct: 29 SSQDVAENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAH 78
>ref|XP_004145064.1| PREDICTED: 40S ribosomal protein S13-like [Cucumis sativus]
Length = 141
Score = 95.5 bits (236), Expect = 7e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDV +NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTGNK+LRILKAH
Sbjct: 19 SSQDVAENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGNKILRILKAH 68
>ref|XP_002266109.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
gi|296084140|emb|CBI24528.3| unnamed protein product
[Vitis vinifera]
Length = 151
Score = 95.5 bits (236), Expect = 7e-18
Identities = 45/50 (90%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LR+LK H
Sbjct: 29 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRVLKGH 78
>ref|NP_001237229.1| 40S ribosomal protein S13 [Glycine max]
gi|356514135|ref|XP_003525762.1| PREDICTED: 40S
ribosomal protein S13-like [Glycine max]
gi|356514137|ref|XP_003525763.1| PREDICTED: 40S
ribosomal protein S13-like [Glycine max]
gi|356563264|ref|XP_003549884.1| PREDICTED: 40S
ribosomal protein S13-like [Glycine max]
gi|54039313|sp|P62302.1|RS13_SOYBN RecName: Full=40S
ribosomal protein S13 gi|44662862|gb|AAS47510.1|
ribosomal protein S13 [Glycine max]
gi|161367348|gb|ABX71080.1| ribosomal protein S13
[Glycine max] gi|255625887|gb|ACU13288.1| unknown
[Glycine max]
Length = 151
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV SVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAH 78
>gb|ACU18555.1| unknown [Glycine max]
Length = 151
Score = 95.1 bits (235), Expect = 8e-18
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKGLTPSQIGVILRDSHGIAQV SVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAH 78
>ref|XP_002280012.1| PREDICTED: 40S ribosomal protein S13 [Vitis vinifera]
gi|147820740|emb|CAN69640.1| hypothetical protein
VITISV_028568 [Vitis vinifera]
gi|296089171|emb|CBI38874.3| unnamed protein product
[Vitis vinifera]
Length = 151
Score = 95.1 bits (235), Expect = 8e-18
Identities = 45/50 (90%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+NICKFAKKG+TPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVEENICKFAKKGMTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>gb|EXB89496.1| 40S ribosomal protein S13 [Morus notabilis]
Length = 140
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/50 (90%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDV++NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78
>gb|EPS68200.1| hypothetical protein M569_06571 [Genlisea aurea]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/50 (92%), Positives = 49/50 (98%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDVE+ ICKFAKKGLTPSQIGVILRDSHGIAQVRSVTG+K+LRILKAH
Sbjct: 29 SSQDVEETICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGSKILRILKAH 78
>ref|XP_004511653.1| PREDICTED: 40S ribosomal protein S13-like [Cicer arietinum]
Length = 151
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/50 (90%), Positives = 50/50 (100%)
Frame = -3
Query: 382 SSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVRSVTGNKVLRILKAH 233
SSQDV++NICKFAKKGLTPSQIGVILRDSHGIAQV+SVTG+K+LRILKAH
Sbjct: 29 SSQDVDENICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAH 78