BLASTX nr result
ID: Rheum21_contig00008155
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00008155
(298 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 110 3e-22
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 110 3e-22
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 107 1e-21
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 107 1e-21
dbj|BAH80072.1| putative unclassified retrotransposon protein [O... 107 1e-21
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 107 1e-21
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 107 2e-21
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 106 3e-21
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 106 3e-21
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc... 105 5e-21
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 105 5e-21
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 105 8e-21
emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group] 105 8e-21
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 104 1e-20
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 104 1e-20
gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus] 103 2e-20
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 103 2e-20
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 103 2e-20
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 103 3e-20
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc... 103 3e-20
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 110 bits (274), Expect = 3e-22
Identities = 45/99 (45%), Positives = 71/99 (71%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+ETFPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IK+ Y+ D
Sbjct: 1139 NRRHAKWVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDA 1198
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++++C R + + ++G++++A +LCIP+S +R
Sbjct: 1199 EFKDVLQNCKEGRTWNKFVLNDGFVFRANKLCIPASSVR 1237
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 110 bits (274), Expect = 3e-22
Identities = 46/99 (46%), Positives = 70/99 (70%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+ETFPYV+ HKK K+NV+ D LS RY +L+ ++ K+ G IK+ Y+ D
Sbjct: 1154 NRRHAKWVEFIETFPYVIKHKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDA 1213
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++E+C R + + + G++++A +LCIP+S IR
Sbjct: 1214 DFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIR 1252
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 107 bits (268), Expect = 1e-21
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ D LS RY LL ++ K+ G IK+ Y+ D
Sbjct: 1098 NRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVHDA 1157
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++ HC + + Y +G++++A +LCIP+S +R
Sbjct: 1158 DFKDVLLHCKDGKGWNKYIVSDGFVFRANKLCIPASSVR 1196
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 107 bits (268), Expect = 1e-21
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ D LS RY LLT ++ K+ G IK+ Y D
Sbjct: 1095 NRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDA 1154
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F ++ HC R + + ++G++++A +LCIP+S +R
Sbjct: 1155 DFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 1193
>dbj|BAH80072.1| putative unclassified retrotransposon protein [Oryza sativa Indica
Group]
Length = 848
Score = 107 bits (268), Expect = 1e-21
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ D LS RY LLT ++ K+ G IK+ Y D
Sbjct: 459 NRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDA 518
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F ++ HC R + + ++G++++A +LCIP+S +R
Sbjct: 519 DFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 557
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 107 bits (268), Expect = 1e-21
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ D LS RY LLT ++ K+ G IK+ Y D
Sbjct: 1189 NRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGLETIKDQYAHDA 1248
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F ++ HC R + + ++G++++A +LCIP+S +R
Sbjct: 1249 DFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 1287
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 107 bits (267), Expect = 2e-21
Identities = 52/99 (52%), Positives = 69/99 (69%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
++RHA WVEF+ETFPYV+ +KK K+NVV D LS RYVLL+ +++KLLGF IK LY D
Sbjct: 1287 NKRHARWVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKLLGFEHIKSLYANDS 1346
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F+ I C F Y+ H+G+L+ RLCIP+S +R
Sbjct: 1347 DFEKIYSSC-EKFAFGKYYRHDGFLFYDNRLCIPNSSLR 1384
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 106 bits (265), Expect = 3e-21
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IKE Y D
Sbjct: 436 NRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDD 495
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++ +C+ R + + G++++A +LCIP+S +R
Sbjct: 496 DFKDVLLNCMEGRTWNKFVLTNGFVFRANKLCIPASSVR 534
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 106 bits (265), Expect = 3e-21
Identities = 45/99 (45%), Positives = 69/99 (69%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+ETFPYV+ KK K+NV+ D LS RY +L+ ++ K+ G IK+ Y+ D
Sbjct: 1151 NRRHAKWVEFIETFPYVIKDKKGKDNVIADALSRRYTMLSQLDFKIFGLETIKDQYVHDA 1210
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++E+C R + + + G++++A +LCIP+S IR
Sbjct: 1211 DFKDVLENCREGRTWNKFIINNGFVFRANKLCIPASSIR 1249
>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 817
Score = 105 bits (263), Expect = 5e-21
Identities = 44/99 (44%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ + LS RY LLT ++ K+ G IK+ Y D
Sbjct: 428 NRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYAHDA 487
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F ++ HC R + + ++G++++A +LCIP+S +R
Sbjct: 488 DFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 526
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 105 bits (263), Expect = 5e-21
Identities = 44/99 (44%), Positives = 68/99 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ + LS RY LLT ++ K+ G IK+ Y D
Sbjct: 1074 NRRHAKWVEFIESFPYVIKHKKGKENIIANALSRRYTLLTQLDYKIFGLETIKDQYAHDA 1133
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F ++ HC R + + ++G++++A +LCIP+S +R
Sbjct: 1134 DFNDVLLHCKDGRTWNKFVINDGFVFRANKLCIPASSVR 1172
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 105 bits (261), Expect = 8e-21
Identities = 45/99 (45%), Positives = 67/99 (67%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IKE Y D
Sbjct: 1123 NRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDD 1182
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++ +C R + + G++++A +LCIP+S +R
Sbjct: 1183 DFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVR 1221
>emb|CAD39981.1| OSJNBa0032B23.3 [Oryza sativa Japonica Group]
Length = 1170
Score = 105 bits (261), Expect = 8e-21
Identities = 45/99 (45%), Positives = 67/99 (67%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IKE Y D
Sbjct: 756 NRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDD 815
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++ +C R + + G++++A +LCIP+S +R
Sbjct: 816 DFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVR 854
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 104 bits (260), Expect = 1e-20
Identities = 45/98 (45%), Positives = 67/98 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KENV+VD LS RY +L+ ++ K+ G IKE Y D
Sbjct: 1019 NRRHAKWVEFIESFPYVIKHKKGKENVIVDALSRRYAMLSQLDFKIFGLETIKEQYAHDD 1078
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPI 294
FK ++ +C R + + G++++A +LCIP+S +
Sbjct: 1079 DFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSV 1116
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 104 bits (260), Expect = 1e-20
Identities = 45/99 (45%), Positives = 67/99 (67%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IKE Y D
Sbjct: 1123 NRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDD 1182
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++ +C R + + G++++A +LCIP+S +R
Sbjct: 1183 DFKNVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVR 1221
>gb|ADB27475.1| gag-pol polyprotein [Cenchrus setaceus]
Length = 287
Score = 103 bits (258), Expect = 2e-20
Identities = 43/96 (44%), Positives = 66/96 (68%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KEN++ D LS RY LL ++ K+ G IK+ Y+ D
Sbjct: 192 NRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGLETIKDQYVNDA 251
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSS 288
FK ++ HC + + + +G++++A +LCIP+S
Sbjct: 252 DFKDVLLHCKDGKGWNKFIISDGFVFRANKLCIPAS 287
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 103 bits (257), Expect = 2e-20
Identities = 48/99 (48%), Positives = 64/99 (64%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+ETFPYVV +KK KEN+V D LS + VLL +E K+ G IKELY D
Sbjct: 1098 NRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADL 1157
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F C + +E Y H+G+L++A +LC+P +R
Sbjct: 1158 DFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVR 1196
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 103 bits (257), Expect = 2e-20
Identities = 48/99 (48%), Positives = 64/99 (64%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+ETFPYVV +KK KEN+V D LS + VLL +E K+ G IKELY D
Sbjct: 66 NRRHAKWVEFIETFPYVVKYKKGKENIVADALSRKNVLLNQLEVKVTGIESIKELYSADL 125
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
F C + +E Y H+G+L++A +LC+P +R
Sbjct: 126 DFSEPYAKCTAGKGWEKYHIHDGFLFRANKLCVPHCSVR 164
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 103 bits (256), Expect = 3e-20
Identities = 44/98 (44%), Positives = 66/98 (67%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+RRHA WVEF+E+FPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IKE Y D
Sbjct: 1123 NRRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYAMLSQLDFKIFGLETIKEQYAHDD 1182
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPI 294
FK ++ +C R + + G++++A +LCIP+S +
Sbjct: 1183 DFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSV 1220
>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1392
Score = 103 bits (256), Expect = 3e-20
Identities = 44/99 (44%), Positives = 66/99 (66%)
Frame = +1
Query: 1 SRRHAHWVEFMETFPYVVMHKKSKENVVVDTLSHRYVLLTHIESKLLGFVLIKELYLIDP 180
+ RHA WVEF+E+FPYV+ HKK KENV+ D LS RY +L+ ++ K+ G IKE Y D
Sbjct: 972 NHRHAKWVEFIESFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFGLETIKEQYAHDD 1031
Query: 181 FFKPIVEHCLRDREFEIYFFHEGYLYKAGRLCIPSSPIR 297
FK ++ +C R + + G++++A +LCIP+S +R
Sbjct: 1032 DFKDVLLNCKEGRTWNKFVLTNGFVFRANKLCIPASSVR 1070