BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00008023
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300424.2| hypothetical protein POPTR_0001s38640g [Popu...    75   9e-12
ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ...    74   2e-11
gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabi...    72   8e-11
gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus pe...    72   1e-10
ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleop...    72   1e-10
ref|XP_002316830.2| hypothetical protein POPTR_0011s07480g [Popu...    71   1e-10
gb|EOY13201.1| RNA-binding family protein [Theobroma cacao]            70   4e-10
ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutr...    69   5e-10
ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arab...    69   5e-10
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...    69   6e-10
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi...    68   1e-09
ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citr...    68   1e-09
gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus pe...    68   1e-09
gb|EXC18503.1| Heterogeneous nuclear ribonucleoprotein A0 [Morus...    67   3e-09
ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleop...    67   3e-09
gb|AFC89654.1| RBP42 [Elaeis guineensis]                               66   4e-09
ref|XP_002305079.1| hypothetical protein POPTR_0004s05450g [Popu...    66   4e-09
ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleop...    65   7e-09
ref|XP_006307615.1| hypothetical protein CARUB_v10009243mg [Caps...    65   9e-09
ref|XP_003529367.1| PREDICTED: heterogeneous nuclear ribonucleop...    65   9e-09

>ref|XP_002300424.2| hypothetical protein POPTR_0001s38640g [Populus trichocarpa]
           gi|550349194|gb|EEE85229.2| hypothetical protein
           POPTR_0001s38640g [Populus trichocarpa]
          Length = 376

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 41/72 (56%), Positives = 54/72 (75%), Gaps = 1/72 (1%)
 Frame = +1

Query: 100 ISMDPSKKRKADENGTVVAT-DLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRH 276
           + MDP+KKRK +ENG V +T DLD+   P  LT  DARK++E  + +QLL ILQ+AVVRH
Sbjct: 1   MQMDPTKKRKLEENGIVSSTTDLDS---PYKLTPQDARKMMERFTPDQLLDILQNAVVRH 57

Query: 277 PEVLVAVRAAAD 312
           P++L AVR+ AD
Sbjct: 58  PDILEAVRSIAD 69


>ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538254|gb|EEF39863.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 398

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/69 (53%), Positives = 46/69 (66%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD +KKRKADENGT   T   +  P   L+  D RK+IEP ++EQLL ILQ+A  RH +V
Sbjct: 1   MDFTKKRKADENGTTTITTTSSPPPTTTLSPQDIRKIIEPFTKEQLLEILQNAATRHADV 60

Query: 286 LVAVRAAAD 312
           L +VR  AD
Sbjct: 61  LESVRTLAD 69


>gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabilis]
          Length = 416

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 41/67 (61%), Positives = 47/67 (70%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MDPSKKRK +ENG V A   D   P   LT  DARK+IE  S +QLL ILQ+AVVRH +V
Sbjct: 1   MDPSKKRKMEENGVVSAAAADNYPPS--LTLEDARKMIESFSHDQLLDILQNAVVRHVDV 58

Query: 286 LVAVRAA 306
           L AVR+A
Sbjct: 59  LDAVRSA 65


>gb|EMJ12834.1| hypothetical protein PRUPE_ppa005857mg [Prunus persica]
          Length = 440

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 40/70 (57%), Positives = 52/70 (74%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MDPSKKRK DENG V+  D D ++ P+ L+  DARK+IE  + +QL+ ILQDAV RH +V
Sbjct: 1   MDPSKKRKLDENGVVL--DTDPSSIPK-LSPEDARKLIERFNPDQLIDILQDAVTRHVDV 57

Query: 286 LVAVRAAADI 315
           L AVR+ AD+
Sbjct: 58  LDAVRSIADL 67


>ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform X1
           [Glycine max] gi|571493430|ref|XP_006592544.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein A3
           isoform X2 [Glycine max]
           gi|571493432|ref|XP_006592545.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein A3 isoform X3
           [Glycine max]
          Length = 437

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MDP+KKRK DENG +     + ++ P  L+ +DARK+IE  + +QLL ILQD V RHP+V
Sbjct: 1   MDPTKKRKLDENGFIN----NDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDV 56

Query: 286 LVAVRAAAD 312
           L AVRA +D
Sbjct: 57  LAAVRAVSD 65


>ref|XP_002316830.2| hypothetical protein POPTR_0011s07480g [Populus trichocarpa]
           gi|550327872|gb|EEE97442.2| hypothetical protein
           POPTR_0011s07480g [Populus trichocarpa]
          Length = 368

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/69 (50%), Positives = 47/69 (68%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRKADENG  + T    ++P  PLT  + RK+IEP +++QLL ILQ A + H +V
Sbjct: 1   MDFIKKRKADENGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATLHHSDV 60

Query: 286 LVAVRAAAD 312
           L +VR+ AD
Sbjct: 61  LNSVRSVAD 69


>gb|EOY13201.1| RNA-binding family protein [Theobroma cacao]
          Length = 429

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/72 (55%), Positives = 48/72 (66%), Gaps = 3/72 (4%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQA---DARKVIEPLSREQLLSILQDAVVRH 276
           MDP+KKRK DENG V      T + P P+T+    D RK+IE  S +QLL ILQDAV RH
Sbjct: 4   MDPTKKRKLDENGIV-----STQSEPDPITKLTPQDGRKLIERFSVDQLLDILQDAVSRH 58

Query: 277 PEVLVAVRAAAD 312
            +VL AVR+ AD
Sbjct: 59  VDVLAAVRSVAD 70


>ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutrema salsugineum]
           gi|557089387|gb|ESQ30095.1| hypothetical protein
           EUTSA_v10011518mg [Eutrema salsugineum]
          Length = 421

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/69 (55%), Positives = 43/69 (62%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRK DENG     D      P  L   DARK+IE  S +QLL ILQ+AVVRHP+V
Sbjct: 1   MDMLKKRKLDENGIGFLNDGHVGAVPTRLMPQDARKIIERFSTDQLLDILQEAVVRHPDV 60

Query: 286 LVAVRAAAD 312
           L  VR+ AD
Sbjct: 61  LEFVRSTAD 69


>ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
           lyrata] gi|297328748|gb|EFH59167.1| hypothetical protein
           ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata]
          Length = 404

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/69 (52%), Positives = 47/69 (68%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRK DENG  + T+      P  LT  DARK+IE  + +QLL +LQ+A+VRHP+V
Sbjct: 1   MDMMKKRKLDENGGGLITNGGGIIGPTRLTPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 286 LVAVRAAAD 312
           L +VR+ AD
Sbjct: 61  LDSVRSTAD 69


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 39/69 (56%), Positives = 49/69 (71%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD +KKRK DENG +V+TD D+ T   P    DARK+IEP   +QLL ILQ+A VRH +V
Sbjct: 1   MDATKKRKMDENG-LVSTDGDSLTKLAP---EDARKIIEPFGHDQLLEILQNAAVRHLDV 56

Query: 286 LVAVRAAAD 312
           L A+R+ AD
Sbjct: 57  LDAIRSIAD 65


>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|42572443|ref|NP_974317.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|75335116|sp|Q9LKA4.1|UBA2C_ARATH RecName:
           Full=UBP1-associated protein 2C
           gi|8777484|dbj|BAA97064.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|20259621|gb|AAM14167.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
           AT3G15010 [Arabidopsis thaliana]
           gi|332642081|gb|AEE75602.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
           gi|332642082|gb|AEE75603.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 404

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRK DENG  + T+      P  L+  DARK+IE  + +QLL +LQ+A+VRHP+V
Sbjct: 1   MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDV 60

Query: 286 LVAVRAAAD 312
           L +VR  AD
Sbjct: 61  LESVRLTAD 69


>ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citrus clementina]
           gi|567919444|ref|XP_006451728.1| hypothetical protein
           CICLE_v10008394mg [Citrus clementina]
           gi|557554953|gb|ESR64967.1| hypothetical protein
           CICLE_v10008394mg [Citrus clementina]
           gi|557554954|gb|ESR64968.1| hypothetical protein
           CICLE_v10008394mg [Citrus clementina]
          Length = 425

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/69 (53%), Positives = 49/69 (71%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRK DENG V++ DL++   P  LTQ DARK++E L+ +QLL +L  AV RH +V
Sbjct: 1   MDSIKKRKIDENGAVLS-DLES---PNRLTQQDARKIVERLTSDQLLDVLSSAVARHDDV 56

Query: 286 LVAVRAAAD 312
           L +VR+ AD
Sbjct: 57  LESVRSIAD 65


>gb|EMJ12722.1| hypothetical protein PRUPE_ppa008108mg [Prunus persica]
          Length = 345

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 35/69 (50%), Positives = 49/69 (71%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD +KKRK + NGTV    L   +    LT  DARK+++PL+++QL+ ILQ+AVVRHP+V
Sbjct: 1   MDFTKKRKTELNGTV---SLSPTSQSSSLTSEDARKLLQPLTQDQLIDILQNAVVRHPDV 57

Query: 286 LVAVRAAAD 312
           L +VR+  D
Sbjct: 58  LDSVRSVTD 66


>gb|EXC18503.1| Heterogeneous nuclear ribonucleoprotein A0 [Morus notabilis]
          Length = 428

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/73 (53%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATP----PQPLTQADARKVIEPLSREQLLSILQDAVVR 273
           MDPSKKRK +ENG V A+           P  L+  DARK+IE  + +QLL ILQDAV R
Sbjct: 1   MDPSKKRKMEENGIVSASAATNGGNHHYHPASLSPQDARKLIEHFTPDQLLDILQDAVAR 60

Query: 274 HPEVLVAVRAAAD 312
           H +VL AVR+ AD
Sbjct: 61  HVDVLDAVRSIAD 73


>ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
           2-like isoform X1 [Glycine max]
           gi|571461885|ref|XP_006582134.1| PREDICTED:
           heterogeneous nuclear ribonucleoprotein A3 homolog
           2-like isoform X2 [Glycine max]
          Length = 444

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MDP+KKRK DENG     + + ++ P  L+ ++ RK+IE  + +QLL ILQDAV RH +V
Sbjct: 1   MDPTKKRKLDENGF----NNNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDV 56

Query: 286 LVAVRAAAD 312
           L AVRA AD
Sbjct: 57  LAAVRAVAD 65


>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
 Frame = +1

Query: 106 MDP-SKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPE 282
           MDP SKKRK+DENG VVA+       P  LT  DARK++EP +RE LL I+++A+ R   
Sbjct: 1   MDPTSKKRKSDENGAVVAS-------PALLTPEDARKIVEPFTREHLLDIVREAMCRDAG 53

Query: 283 VLVAVRAAAD 312
           VL AVRA AD
Sbjct: 54  VLDAVRAIAD 63


>ref|XP_002305079.1| hypothetical protein POPTR_0004s05450g [Populus trichocarpa]
           gi|222848043|gb|EEE85590.1| hypothetical protein
           POPTR_0004s05450g [Populus trichocarpa]
          Length = 384

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/69 (44%), Positives = 46/69 (66%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           M+  KKRKA+ENG  + T     +P  PLT  + RK++EP +++QLL ILQ A + H ++
Sbjct: 1   MEFIKKRKAEENGISIPTGTSPPSPITPLTPEEIRKILEPFTKDQLLDILQSATLHHSDI 60

Query: 286 LVAVRAAAD 312
           L +VR+ AD
Sbjct: 61  LNSVRSVAD 69


>ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
           isoform X1 [Citrus sinensis]
           gi|568864564|ref|XP_006485664.1| PREDICTED:
           heterogeneous nuclear ribonucleoproteins A1 homolog
           isoform X2 [Citrus sinensis]
          Length = 425

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/69 (52%), Positives = 48/69 (69%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRK DENG V++ DL++   P  LT  DARK++E L+ +QLL +L  AV RH +V
Sbjct: 1   MDSIKKRKIDENGAVLS-DLES---PNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDV 56

Query: 286 LVAVRAAAD 312
           L +VR+ AD
Sbjct: 57  LESVRSIAD 65


>ref|XP_006307615.1| hypothetical protein CARUB_v10009243mg [Capsella rubella]
           gi|565499954|ref|XP_006307616.1| hypothetical protein
           CARUB_v10009243mg [Capsella rubella]
           gi|482576326|gb|EOA40513.1| hypothetical protein
           CARUB_v10009243mg [Capsella rubella]
           gi|482576327|gb|EOA40514.1| hypothetical protein
           CARUB_v10009243mg [Capsella rubella]
          Length = 422

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/69 (50%), Positives = 43/69 (62%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVVATDLDTATPPQPLTQADARKVIEPLSREQLLSILQDAVVRHPEV 285
           MD  KKRK D+NG  +  D         L   DARK+IE  S +QLL ILQ+A+VRHP+V
Sbjct: 1   MDMLKKRKLDDNGIGMLNDGVIGAVSSRLMPQDARKIIERFSTDQLLDILQEAIVRHPDV 60

Query: 286 LVAVRAAAD 312
           L  VR+ AD
Sbjct: 61  LEIVRSTAD 69


>ref|XP_003529367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like isoform
           X1 [Glycine max] gi|571467135|ref|XP_006583847.1|
           PREDICTED: heterogeneous nuclear ribonucleoprotein
           A0-like isoform X2 [Glycine max]
          Length = 384

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 8/78 (10%)
 Frame = +1

Query: 106 MDPSKKRKADENGTVV------ATDLD--TATPPQPLTQADARKVIEPLSREQLLSILQD 261
           M+ +KKRK +ENG         +T+     A  P PL   D RK+++P S+EQLL +LQ 
Sbjct: 1   MEFTKKRKTEENGDTTDYPPQQSTEESPIAAAAPAPLAAEDIRKILQPFSQEQLLDLLQS 60

Query: 262 AVVRHPEVLVAVRAAADI 315
           A +RHP+VL AVRA AD+
Sbjct: 61  ASLRHPDVLDAVRAVADL 78