BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00007993
         (725 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY33861.1| DNA-directed RNA polymerases I and III subunit RP...   149   1e-33
ref|XP_002299838.1| DNA-directed RNA polymerase I(A) and III(C) ...   146   6e-33
ref|XP_003621619.1| DNA-directed RNA polymerases I and III subun...   146   8e-33
ref|XP_006295244.1| hypothetical protein CARUB_v10024331mg [Caps...   145   1e-32
gb|AFK35687.1| unknown [Medicago truncatula]                          144   3e-32
ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycin...   144   3e-32
gb|ABW81101.1| RNApol24 [Cleome spinosa]                              144   3e-32
ref|XP_006358713.1| PREDICTED: DNA-directed RNA polymerases I an...   144   4e-32
gb|ESW11321.1| hypothetical protein PHAVU_008G020000g [Phaseolus...   143   5e-32
ref|XP_004240389.1| PREDICTED: DNA-directed RNA polymerases I an...   143   6e-32
ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I an...   142   1e-31
ref|XP_006858524.1| hypothetical protein AMTR_s00071p00151710 [A...   141   2e-31
ref|XP_003600908.1| DNA-directed RNA polymerases I and III subun...   141   2e-31
ref|NP_001066351.1| Os12g0194700 [Oryza sativa Japonica Group] g...   140   3e-31
ref|XP_004979094.1| PREDICTED: DNA-directed RNA polymerases I an...   140   4e-31
ref|XP_002879217.1| predicted protein [Arabidopsis lyrata subsp....   139   7e-31
ref|XP_004492017.1| PREDICTED: DNA-directed RNA polymerases I an...   139   9e-31
ref|XP_006663894.1| PREDICTED: DNA-directed RNA polymerases I an...   139   1e-30
ref|XP_002442979.1| hypothetical protein SORBIDRAFT_08g005640 [S...   139   1e-30
ref|NP_180514.1| DNA-directed RNA polymerase RPAC14 [Arabidopsis...   138   2e-30

>gb|EOY33861.1| DNA-directed RNA polymerases I and III subunit RPAC2 isoform 1
           [Theobroma cacao] gi|508786606|gb|EOY33862.1|
           DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Theobroma cacao]
          Length = 114

 Score =  149 bits (375), Expect = 1e-33
 Identities = 72/114 (63%), Positives = 84/114 (73%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D SA+TFSLTEEDHTLAN++RF LNQDPRV+ C YSIPHPS A+VN+RVQTTG
Sbjct: 1   MEHGSFTDNSAATFSLTEEDHTLANAVRFTLNQDPRVTFCGYSIPHPSNARVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPE 245
           DPA EV KDACQ+L+ +C HVR  FD AV  FK + A K+      D    E E
Sbjct: 61  DPAREVLKDACQDLMLMCRHVRSGFDKAVEDFKASNAVKAMKIDSQDSDSEESE 114


>ref|XP_002299838.1| DNA-directed RNA polymerase I(A) and III(C) 14 kDa subunit family
           protein [Populus trichocarpa]
           gi|222847096|gb|EEE84643.1| DNA-directed RNA polymerase
           I(A) and III(C) 14 kDa subunit family protein [Populus
           trichocarpa]
          Length = 102

 Score =  146 bits (369), Expect = 6e-33
 Identities = 66/95 (69%), Positives = 77/95 (81%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+ RDPS++TF   +EDHTLANS+RF LNQDPRVS C YSIPHPS+AKVN+RVQTTG
Sbjct: 1   MEHGSVRDPSSATFCFVDEDHTLANSVRFALNQDPRVSFCGYSIPHPSDAKVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRN 302
           DPA EV KDACQNL+ +C HVR   D AV  ++ N
Sbjct: 61  DPAREVLKDACQNLMVMCQHVRSTLDKAVDDYRSN 95


>ref|XP_003621619.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355496634|gb|AES77837.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 115

 Score =  146 bits (368), Expect = 8e-33
 Identities = 69/115 (60%), Positives = 86/115 (74%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S STFSL +EDHT ANS+RFILNQDPRV+ C YSIPHPSE +VNVRVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFILNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPES 242
           DPA+EV KD CQ+L+ +C HVR  F  AV  FK +++ +S SE    E+  + ++
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRSTSEKAVSESDDDMDT 115


>ref|XP_006295244.1| hypothetical protein CARUB_v10024331mg [Capsella rubella]
           gi|482563952|gb|EOA28142.1| hypothetical protein
           CARUB_v10024331mg [Capsella rubella]
          Length = 122

 Score =  145 bits (367), Expect = 1e-32
 Identities = 71/117 (60%), Positives = 90/117 (76%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  + S +TF+LTEEDHTLAN++RF+LNQDPRV+V AY+IPHPS  KVN+RVQTTG
Sbjct: 1   MEHGSITNNSHATFTLTEEDHTLANAVRFVLNQDPRVTVGAYTIPHPSHEKVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPESMG 236
           DPA+EVFKDACQ L+ +  HVR VFD AVT +K  E  K  ++  ++E K + E  G
Sbjct: 61  DPASEVFKDACQELMQINRHVRSVFDKAVTAYKAEEERK--AKEAEEELKRQRELFG 115


>gb|AFK35687.1| unknown [Medicago truncatula]
          Length = 115

 Score =  144 bits (363), Expect = 3e-32
 Identities = 68/115 (59%), Positives = 85/115 (73%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S STFSL +EDHT ANS+RF LNQDPRV+ C YSIPHPSE +VNVRVQTTG
Sbjct: 1   MEHGSYSDLSKSTFSLVDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPES 242
           DPA+EV KD CQ+L+ +C HVR  F  AV  FK +++ +S SE    E+  + ++
Sbjct: 61  DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRSTSEKSVSESDDDMDT 115


>ref|NP_001238111.1| uncharacterized protein LOC100500695 [Glycine max]
           gi|255630968|gb|ACU15848.1| unknown [Glycine max]
          Length = 107

 Score =  144 bits (363), Expect = 3e-32
 Identities = 69/108 (63%), Positives = 85/108 (78%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S STFSL +EDHT AN++RF LNQDPRVS C YSIPHPS+ +VN+RVQTTG
Sbjct: 1   MEHGSYTDQSKSTFSLVDEDHTFANAVRFTLNQDPRVSFCGYSIPHPSDNRVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDE 263
           DP+ EV KDACQ+L+ +C HVR  FD AV+ FK ++A K+ +E MD E
Sbjct: 61  DPSREVLKDACQDLMLMCQHVRSTFDKAVSDFKISKARKN-NEDMDVE 107


>gb|ABW81101.1| RNApol24 [Cleome spinosa]
          Length = 109

 Score =  144 bits (363), Expect = 3e-32
 Identities = 70/106 (66%), Positives = 86/106 (81%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S +TFSLTEEDHTLAN++RF+LNQDPRV+ C YSIPHPS A+VN+RVQTTG
Sbjct: 1   MEHGSFTDHSHATFSLTEEDHTLANAVRFVLNQDPRVTFCGYSIPHPSHARVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMD 269
           DPA EV KDACQ+L+ +  HVR VFD+AV  FK+     +++ESMD
Sbjct: 61  DPAREVLKDACQDLMLMNRHVRGVFDNAVADFKKG----NQTESMD 102


>ref|XP_006358713.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Solanum tuberosum]
          Length = 105

 Score =  144 bits (362), Expect = 4e-32
 Identities = 64/100 (64%), Positives = 81/100 (81%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S +TFSLT+EDHTLAN++RF LNQDPRV+ C YSIPHPS+A+VN+RVQTTG
Sbjct: 1   MEHGSFEDQSKATFSLTDEDHTLANAVRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKS 287
           DPA EVF D+CQ+L+ +C+HVR  FD AV  FK  +  ++
Sbjct: 61  DPAREVFNDSCQDLMLICEHVRVTFDQAVLKFKTGKGLRA 100


>gb|ESW11321.1| hypothetical protein PHAVU_008G020000g [Phaseolus vulgaris]
          Length = 97

 Score =  143 bits (361), Expect = 5e-32
 Identities = 64/96 (66%), Positives = 81/96 (84%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           ME+G++ DP+ STFS+ +EDHTLAN++RF LNQDPRVS C YSIPHPSE +VN+RVQTTG
Sbjct: 1   MEYGSSSDPTKSTFSILDEDHTLANTVRFTLNQDPRVSFCGYSIPHPSENRVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNE 299
           DPA+EV KDACQ+L+ +C HVR  FD AV+ FK+ +
Sbjct: 61  DPASEVLKDACQDLMLMCQHVRGTFDKAVSDFKKQQ 96


>ref|XP_004240389.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Solanum lycopersicum]
          Length = 105

 Score =  143 bits (360), Expect = 6e-32
 Identities = 64/93 (68%), Positives = 78/93 (83%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S +TFSLT+EDHTLAN++RF LNQDPRV+ C YSIPHPS+A+VN+RVQTTG
Sbjct: 1   MEHGSFEDQSKATFSLTDEDHTLANAVRFTLNQDPRVTFCGYSIPHPSDARVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFK 308
           DPA EVF D+CQ+L+ +C+HVR  FD AV  FK
Sbjct: 61  DPAREVFNDSCQDLMLICEHVRGTFDQAVLKFK 93


>ref|XP_002281351.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2
           isoform 1 [Vitis vinifera] gi|297745971|emb|CBI16027.3|
           unnamed protein product [Vitis vinifera]
          Length = 105

 Score =  142 bits (357), Expect = 1e-31
 Identities = 66/102 (64%), Positives = 80/102 (78%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S STFSL++EDHTLANS+RF LNQDPRV+ C YSIPHPS+A+VN+RVQTTG
Sbjct: 1   MEHGSFSDHSKSTFSLSDEDHTLANSIRFTLNQDPRVAFCGYSIPHPSDARVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSES 281
           D A EV KDACQ+L+ +C HVR  FD AV  +K ++  K  S
Sbjct: 61  DSAREVLKDACQDLMLMCQHVRSTFDKAVVDYKMSKPVKDMS 102


>ref|XP_006858524.1| hypothetical protein AMTR_s00071p00151710 [Amborella trichopoda]
           gi|548862633|gb|ERN19991.1| hypothetical protein
           AMTR_s00071p00151710 [Amborella trichopoda]
          Length = 134

 Score =  141 bits (356), Expect = 2e-31
 Identities = 68/120 (56%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           ME G+   P++STFSLT+EDHTL N++RF+LNQDPR S C YSIPHPSE +VN+RVQTTG
Sbjct: 11  MESGSLESPNSSTFSLTDEDHTLGNAVRFVLNQDPRTSFCGYSIPHPSENRVNIRVQTTG 70

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEA--AKSESESMDDEAKSEPESMGD 233
           DPA +VFKDA Q+L+S+C HVR  FD AV  FK+  A   +  +    D  K   +++GD
Sbjct: 71  DPAKDVFKDALQDLMSMCQHVRGTFDKAVIDFKKKGAKGGRQRNTKGGDREKVVRKAVGD 130


>ref|XP_003600908.1| DNA-directed RNA polymerases I and III subunit RPAC2 [Medicago
           truncatula] gi|355489956|gb|AES71159.1| DNA-directed RNA
           polymerases I and III subunit RPAC2 [Medicago
           truncatula]
          Length = 218

 Score =  141 bits (356), Expect = 2e-31
 Identities = 67/115 (58%), Positives = 83/115 (72%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG   D S STFSL  EDHT +NS+RF LNQDPRV+ C YSIPHPSE +VNVRVQTTG
Sbjct: 104 MEHGLYSDLSKSTFSLVNEDHTFSNSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 163

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPES 242
           DPA+EV KD CQ+L+ +C HVR  F  AV  FK +++ +S SE    E+  + ++
Sbjct: 164 DPASEVLKDGCQDLMLMCQHVRSTFGKAVNDFKTSKSVRSTSEKSVSESDDDMDT 218


>ref|NP_001066351.1| Os12g0194700 [Oryza sativa Japonica Group]
           gi|77553282|gb|ABA96078.1| RNA polymerase Rpb3/Rpb11
           dimerisation domain containing protein, expressed [Oryza
           sativa Japonica Group] gi|113648858|dbj|BAF29370.1|
           Os12g0194700 [Oryza sativa Japonica Group]
           gi|125578768|gb|EAZ19914.1| hypothetical protein
           OsJ_35508 [Oryza sativa Japonica Group]
           gi|215768489|dbj|BAH00718.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186562|gb|EEC68989.1| hypothetical protein
           OsI_37758 [Oryza sativa Indica Group]
          Length = 108

 Score =  140 bits (354), Expect = 3e-31
 Identities = 63/95 (66%), Positives = 79/95 (83%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D +ASTFS+ EEDHTLANS+RF+LNQDPRV+ C YSIPHP++ KVN+RVQTTG
Sbjct: 1   MEHGSVTDSTASTFSIVEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRN 302
           DPA +V KD+ Q+L+ +C HVR  FD AVT F++N
Sbjct: 61  DPAKDVLKDSLQDLMVMCQHVRGTFDTAVTQFRQN 95


>ref|XP_004979094.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Setaria italica]
          Length = 106

 Score =  140 bits (353), Expect = 4e-31
 Identities = 67/110 (60%), Positives = 84/110 (76%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D +ASTFS+ EEDHTLANS RF+LNQDPRV+ C YSIPHP++ KVN+RVQTTG
Sbjct: 1   MEHGSATDSTASTFSIMEEDHTLANSARFVLNQDPRVAFCGYSIPHPADKKVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAK 257
           DPA +V KDA Q+L+ +C HVR  FD+AV + +    AK  +E MD + K
Sbjct: 61  DPAKDVLKDALQDLMVMCQHVRGTFDNAVASHR----AKEPAEQMDIDQK 106


>ref|XP_002879217.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297325056|gb|EFH55476.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 122

 Score =  139 bits (351), Expect = 7e-31
 Identities = 68/117 (58%), Positives = 90/117 (76%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  + S ++F+L+EEDHTLAN++RF+LNQDPRV+V AY+IPHPS  +VN+RVQTTG
Sbjct: 1   MEHGSFTNDSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPESMG 236
           DPA EVFKDACQ L+ +  HVR VFD AVT +K  +  K E+E  ++E K + +  G
Sbjct: 61  DPAREVFKDACQELMQMNRHVRSVFDKAVTEYKAAKKLKEEAE--EEELKRQRDLFG 115


>ref|XP_004492017.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Cicer arietinum]
          Length = 104

 Score =  139 bits (350), Expect = 9e-31
 Identities = 65/93 (69%), Positives = 74/93 (79%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S STFSLT+EDHT ANS+RF LNQDPRV+ C YSIPHPSE +VNVRVQTTG
Sbjct: 1   MEHGSYSDQSKSTFSLTDEDHTFANSVRFTLNQDPRVTFCGYSIPHPSENRVNVRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFK 308
           DPA EV KD+CQ+L+ +C HVR  F  AV  FK
Sbjct: 61  DPACEVLKDSCQDLMLMCQHVRSTFGKAVNEFK 93


>ref|XP_006663894.1| PREDICTED: DNA-directed RNA polymerases I and III subunit
           RPAC2-like [Oryza brachyantha]
          Length = 109

 Score =  139 bits (349), Expect = 1e-30
 Identities = 61/95 (64%), Positives = 79/95 (83%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D ++STFS+ EEDHTLANS+RF+LNQDPRV+ C YSIPHP++ K+N+RVQTTG
Sbjct: 1   MEHGSVTDSTSSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPADNKINIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRN 302
           DPA +V KD+ Q+L+ +C HVR  FD AVT F++N
Sbjct: 61  DPAKDVLKDSLQDLMVMCQHVRGTFDTAVTDFRQN 95


>ref|XP_002442979.1| hypothetical protein SORBIDRAFT_08g005640 [Sorghum bicolor]
           gi|241943672|gb|EES16817.1| hypothetical protein
           SORBIDRAFT_08g005640 [Sorghum bicolor]
          Length = 108

 Score =  139 bits (349), Expect = 1e-30
 Identities = 63/100 (63%), Positives = 80/100 (80%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  D S+STFS+ EEDHTLANS+RF+LNQDPRV+ C YSIPHP+E KVN+RVQTTG
Sbjct: 1   MEHGSLDDSSSSTFSIMEEDHTLANSVRFVLNQDPRVAFCGYSIPHPAENKVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKS 287
           DPA +V KDA Q+L+ +C H+R   D AV  F+ N+ A++
Sbjct: 61  DPAKDVLKDALQDLMVMCQHIRGTLDTAVADFRGNKTAEA 100


>ref|NP_180514.1| DNA-directed RNA polymerase RPAC14 [Arabidopsis thaliana]
           gi|79323435|ref|NP_001031443.1| DNA-directed RNA
           polymerase RPAC14 [Arabidopsis thaliana]
           gi|1184686|gb|AAC49453.1| RNA polymerase I(A) and III(C)
           14 kDa subunit [Arabidopsis thaliana]
           gi|1184688|gb|AAC49454.1| Arabidopsis thaliana RNA
           polymerase I(A) and III(C) 14 kDa subunit [Arabidopsis
           thaliana] gi|3980382|gb|AAC95185.1| DNA-directed RNA
           polymerase 14 kDa subunit (AtRPAC14) [Arabidopsis
           thaliana] gi|26452894|dbj|BAC43525.1| putative
           DNA-directed RNA polymerase 14 kDa subunit AtRPAC14
           [Arabidopsis thaliana] gi|28827296|gb|AAO50492.1|
           putative DNA-directed RNA polymerase 14 kDa subunit
           (AtRPAC14) [Arabidopsis thaliana]
           gi|330253175|gb|AEC08269.1| DNA-directed RNA polymerase
           RPAC14 [Arabidopsis thaliana]
           gi|330253176|gb|AEC08270.1| DNA-directed RNA polymerase
           RPAC14 [Arabidopsis thaliana]
          Length = 122

 Score =  138 bits (347), Expect = 2e-30
 Identities = 67/117 (57%), Positives = 89/117 (76%)
 Frame = -2

Query: 586 MEHGTTRDPSASTFSLTEEDHTLANSLRFILNQDPRVSVCAYSIPHPSEAKVNVRVQTTG 407
           MEHG+  + S ++F+L+EEDHTLAN++RF+LNQDPRV+V AY+IPHPS  +VN+RVQTTG
Sbjct: 1   MEHGSFTNVSHASFTLSEEDHTLANAVRFVLNQDPRVTVAAYTIPHPSLEQVNIRVQTTG 60

Query: 406 DPAAEVFKDACQNLISVCDHVRKVFDDAVTTFKRNEAAKSESESMDDEAKSEPESMG 236
           DPA EVFKDACQ L+ +  HVR VFD AV  +K  +  K E+E  ++E K + +  G
Sbjct: 61  DPAREVFKDACQELMQMNRHVRSVFDKAVAEYKDEQKRKEEAE--EEELKRQRDLFG 115