BLASTX nr result

ID: Rheum21_contig00007678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00007678
         (284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ23754.1| hypothetical protein PRUPE_ppa006232mg [Prunus pe...    99   4e-19
ref|XP_004297176.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    97   2e-18
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...    96   6e-18
ref|XP_006437792.1| hypothetical protein CICLE_v10031638mg [Citr...    94   1e-17
ref|XP_006437791.1| hypothetical protein CICLE_v10031638mg [Citr...    94   1e-17
ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    94   2e-17
ref|XP_002315980.1| F-box family protein [Populus trichocarpa] g...    92   9e-17
gb|EXB44951.1| F-box/FBD/LRR-repeat protein [Morus notabilis]          91   1e-16
ref|XP_006307650.1| hypothetical protein CARUB_v10009278mg [Caps...    91   1e-16
ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR...    91   1e-16
ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein...    91   2e-16
dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]                 91   2e-16
ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata sub...    90   3e-16
gb|EOY01504.1| F-box/RNI-like superfamily protein isoform 2 [The...    89   5e-16
gb|EOY01503.1| F-box/RNI-like superfamily protein isoform 1 [The...    89   5e-16
gb|ESW25538.1| hypothetical protein PHAVU_003G044500g [Phaseolus...    88   1e-15
ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    84   1e-14
ref|XP_003517903.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    84   3e-14
ref|XP_006417115.1| hypothetical protein EUTSA_v10007748mg [Eutr...    83   3e-14
ref|XP_004236987.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    80   4e-13

>gb|EMJ23754.1| hypothetical protein PRUPE_ppa006232mg [Prunus persica]
          Length = 421

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 45/93 (48%), Positives = 64/93 (68%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W TL HLAFD+ CVT S D  + E  L  FI +ALFLH+GP+HKF+L  S++++C  IDQ
Sbjct: 44  WTTLTHLAFDEKCVTLSNDRTLVERSLIDFITRALFLHQGPVHKFQLSTSYLQSCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLY 6
           W++FLSRN I+ L+L   + +   W+ + S L+
Sbjct: 104 WILFLSRNDIKELVLELGEGE---WFRVPSCLF 133


>ref|XP_004297176.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Fragaria
           vesca subsp. vesca]
          Length = 421

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 42/86 (48%), Positives = 60/86 (69%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W TL HL FD+ CV  +GD V  E  L +FI +ALFLH+GPIHKF++  S +++C  IDQ
Sbjct: 44  WTTLTHLVFDEKCVAQTGDQVAVEKSLVNFITRALFLHQGPIHKFQVCTSILQSCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWY 27
           W++F+SRNGI+ ++L   +D    W+
Sbjct: 104 WILFISRNGIKEVVLELGED--GEWF 127


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 46/94 (48%), Positives = 64/94 (68%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WATL HL FDD CV    D  + E+RL  FI++ALFLH GPIHKF+L  S+++ C  IDQ
Sbjct: 44  WATLTHLVFDDKCVAMYCDKGVLESRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSR+ I+ L+L   + +   W+ + S L++
Sbjct: 104 WLLFLSRSDIKELVLELGEGE---WFRVPSCLFN 134


>ref|XP_006437792.1| hypothetical protein CICLE_v10031638mg [Citrus clementina]
           gi|567890545|ref|XP_006437793.1| hypothetical protein
           CICLE_v10031638mg [Citrus clementina]
           gi|568861632|ref|XP_006484304.1| PREDICTED:
           F-box/FBD/LRR-repeat protein At1g13570-like isoform X1
           [Citrus sinensis] gi|568861634|ref|XP_006484305.1|
           PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like
           isoform X2 [Citrus sinensis] gi|557539988|gb|ESR51032.1|
           hypothetical protein CICLE_v10031638mg [Citrus
           clementina] gi|557539989|gb|ESR51033.1| hypothetical
           protein CICLE_v10031638mg [Citrus clementina]
          Length = 422

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/94 (50%), Positives = 61/94 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WATL  L FD+NCV  S D V  E  L  FI  ALFLH+GPIHKF+L    +++C  IDQ
Sbjct: 45  WATLTQLVFDENCVPISNDRVPVEKSLVKFITHALFLHQGPIHKFQLSTVHLQSCPDIDQ 104

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSRN IR L+L   + +   W+ + S L++
Sbjct: 105 WLLFLSRNDIRELVLELGEGE---WFRVPSCLFN 135


>ref|XP_006437791.1| hypothetical protein CICLE_v10031638mg [Citrus clementina]
           gi|568861636|ref|XP_006484306.1| PREDICTED:
           F-box/FBD/LRR-repeat protein At1g13570-like isoform X3
           [Citrus sinensis] gi|557539987|gb|ESR51031.1|
           hypothetical protein CICLE_v10031638mg [Citrus
           clementina]
          Length = 420

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/94 (50%), Positives = 61/94 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WATL  L FD+NCV  S D V  E  L  FI  ALFLH+GPIHKF+L    +++C  IDQ
Sbjct: 43  WATLTQLVFDENCVPISNDRVPVEKSLVKFITHALFLHQGPIHKFQLSTVHLQSCPDIDQ 102

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSRN IR L+L   + +   W+ + S L++
Sbjct: 103 WLLFLSRNDIRELVLELGEGE---WFRVPSCLFN 133


>ref|XP_004135131.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Cucumis
           sativus]
          Length = 418

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 44/94 (46%), Positives = 62/94 (65%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W TL  L FDD+CV  S D + ++  L +FI   LFLH+GPIHKF L  ++++N   +DQ
Sbjct: 44  WTTLTQLVFDDDCVAMSNDGIYED--LIYFITHVLFLHEGPIHKFHLSATYLQNTPDLDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSR GIR LI+   D +   W+ +HS L++
Sbjct: 102 WLLFLSRKGIRELIIELGDGE---WFRVHSCLFN 132


>ref|XP_002315980.1| F-box family protein [Populus trichocarpa]
           gi|222865020|gb|EEF02151.1| F-box family protein
           [Populus trichocarpa]
          Length = 420

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 41/94 (43%), Positives = 62/94 (65%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W TL HL FDD C+    D  + E  + +FI +ALFLH+GPIHKF+L  S+++ C  IDQ
Sbjct: 44  WTTLTHLVFDDKCIRMCSDRPVVENCMVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           W++FLSR+ I+ L+L   + +   W+ + S L++
Sbjct: 104 WILFLSRSDIKELVLELGEGE---WFRVPSCLFN 134


>gb|EXB44951.1| F-box/FBD/LRR-repeat protein [Morus notabilis]
          Length = 417

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 42/93 (45%), Positives = 61/93 (65%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WA++  L FD+ CV    D   DE  L  FI +ALFLH+GPIHKF+L  S++++C  IDQ
Sbjct: 44  WASITQLVFDEKCVPFCSDQDFDEKSLIEFITRALFLHEGPIHKFQLTTSYLQSCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLY 6
           W++FLSRN I+ L L   +    +W+ + +SL+
Sbjct: 104 WILFLSRNDIKELALELGE---GDWFRVPASLF 133


>ref|XP_006307650.1| hypothetical protein CARUB_v10009278mg [Capsella rubella]
           gi|482576361|gb|EOA40548.1| hypothetical protein
           CARUB_v10009278mg [Capsella rubella]
          Length = 416

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W+T+  L FD+ CV+ S D  + ET L  F+   L LH+GPIHKF+L  SF++    IDQ
Sbjct: 42  WSTVTDLVFDEKCVSPSNDRCVVETNLVRFVTGVLLLHQGPIHKFQLSTSFLQCRPDIDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSL 9
           WL+FLSRNGI+ L+L   + ++    CL S L
Sbjct: 102 WLLFLSRNGIKELVLELGEGEFRVPSCLFSCL 133


>ref|XP_004155285.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
           At1g13570-like [Cucumis sativus]
          Length = 418

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 43/94 (45%), Positives = 61/94 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W TL  L FDD+CV  S D + ++  L +FI   L LH+GPIHKF L  ++++N   +DQ
Sbjct: 44  WTTLTQLVFDDDCVAMSNDGIYED--LIYFITHVLXLHEGPIHKFHLSATYLQNTPDLDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSR GIR LI+   D +   W+ +HS L++
Sbjct: 102 WLLFLSRKGIRELIIELGDGE---WFRVHSCLFN 132


>ref|NP_172814.1| F-box/FBD/LRR-repeat protein containing protein [Arabidopsis
           thaliana] gi|75263255|sp|Q9FZ70.1|FDL1_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At1g13570
           gi|9802755|gb|AAF99824.1|AC027134_6 Unknown protein
           [Arabidopsis thaliana] gi|111074352|gb|ABH04549.1|
           At1g13570 [Arabidopsis thaliana]
           gi|332190914|gb|AEE29035.1| F-box/FBD/LRR-repeat protein
           containing protein [Arabidopsis thaliana]
          Length = 416

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/92 (47%), Positives = 58/92 (63%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W+TL  L FD+ CV+ S D  + ET L  FI   L LH+GPIHKF+L  SF +    IDQ
Sbjct: 42  WSTLTDLVFDEKCVSPSNDRCVVETNLVRFITGVLLLHQGPIHKFQLSTSFKQCRPDIDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSL 9
           WL+FLSRNGI+ L+L   + ++    CL + L
Sbjct: 102 WLLFLSRNGIKELVLKLGEGEFRVPACLFNCL 133


>dbj|BAC43076.2| unknown protein [Arabidopsis thaliana]
          Length = 416

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/92 (47%), Positives = 58/92 (63%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W+TL  L FD+ CV+ S D  + ET L  FI   L LH+GPIHKF+L  SF +    IDQ
Sbjct: 42  WSTLTDLVFDEKCVSPSNDRCVVETNLVRFITGVLLLHQGPIHKFQLSTSFKQCRPDIDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSL 9
           WL+FLSRNGI+ L+L   + ++    CL + L
Sbjct: 102 WLLFLSRNGIKELVLKLGEGEFRVPACLFNCL 133


>ref|XP_002892759.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297338601|gb|EFH69018.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 416

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/92 (46%), Positives = 59/92 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W+TL  L FD+ CV+ + D  + ET L  FI   L LH+GPIHKF+L  SF++    IDQ
Sbjct: 42  WSTLTDLVFDEKCVSPANDRCVVETSLVRFITGVLLLHQGPIHKFQLSTSFLQCRPDIDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSL 9
           WL+FLSRNGI+ L+L   + ++    CL + L
Sbjct: 102 WLLFLSRNGIKELVLELGEGEFRVPSCLFNCL 133


>gb|EOY01504.1| F-box/RNI-like superfamily protein isoform 2 [Theobroma cacao]
          Length = 345

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/94 (45%), Positives = 61/94 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WAT+  L FD+ CV  S D    E  L  FI +ALFLH+GPIHKF+L  ++++ C  IDQ
Sbjct: 44  WATITQLVFDEKCVDLSNDRCEFEDSLVKFITRALFLHQGPIHKFQLTTTYLQCCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSRN I+ L+L   + +   W+ + S L++
Sbjct: 104 WLLFLSRNDIKELVLELGEGE---WFRVPSCLFN 134


>gb|EOY01503.1| F-box/RNI-like superfamily protein isoform 1 [Theobroma cacao]
          Length = 421

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 43/94 (45%), Positives = 61/94 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WAT+  L FD+ CV  S D    E  L  FI +ALFLH+GPIHKF+L  ++++ C  IDQ
Sbjct: 44  WATITQLVFDEKCVDLSNDRCEFEDSLVKFITRALFLHQGPIHKFQLTTTYLQCCPDIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           WL+FLSRN I+ L+L   + +   W+ + S L++
Sbjct: 104 WLLFLSRNDIKELVLELGEGE---WFRVPSCLFN 134


>gb|ESW25538.1| hypothetical protein PHAVU_003G044500g [Phaseolus vulgaris]
          Length = 421

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 39/94 (41%), Positives = 63/94 (67%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WA++  L FDD CV  + D  + E  +  FI + LFLH+GPIHKF++  S +++C  IDQ
Sbjct: 44  WASITQLVFDDKCVPFNNDREVVERSVVKFITRVLFLHQGPIHKFQITNSKLQSCPEIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           W++FLSRNGI+ L++   + ++   + + SSL++
Sbjct: 104 WILFLSRNGIKELVMELGEGEF---FRIPSSLFN 134


>ref|XP_003518816.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 [Glycine max]
          Length = 421

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 36/82 (43%), Positives = 54/82 (65%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WA++  L FDD CV  S D    E  +  FI + LFLH+GPIHKF++  S +++C  IDQ
Sbjct: 44  WASITQLVFDDKCVPFSNDREAVEKSVVKFITRVLFLHQGPIHKFQITNSKLQSCPEIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQY 39
           W++FLSRN I+ L++   + ++
Sbjct: 104 WILFLSRNDIKELVMELGEGEF 125


>ref|XP_003517903.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Glycine
           max]
          Length = 421

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/94 (40%), Positives = 61/94 (64%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WA++  L FDD CV  S D  + E  +  FI + LFL +GPIHKF++  S +++C  IDQ
Sbjct: 44  WASITRLVFDDKCVPFSNDREVVEKSVVKFITRVLFLRQGPIHKFQITNSKLQSCPEIDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSLYS 3
           W++FLSRN I+ L++   + ++   + + SSL++
Sbjct: 104 WILFLSRNDIKELVMELGEGEF---FRIPSSLFN 134


>ref|XP_006417115.1| hypothetical protein EUTSA_v10007748mg [Eutrema salsugineum]
           gi|557094886|gb|ESQ35468.1| hypothetical protein
           EUTSA_v10007748mg [Eutrema salsugineum]
          Length = 416

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 40/92 (43%), Positives = 56/92 (60%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           W+TL  L FD+ CV  + D  +    L  FI+  L LH+GPIHKF+L  +F++    IDQ
Sbjct: 42  WSTLTDLVFDEKCVAPANDRGVVVNNLVRFISGVLLLHQGPIHKFQLSTTFLQCRPDIDQ 101

Query: 104 WLIFLSRNGIRVLILTFEDDQYANWYCLHSSL 9
           WL+FLSRNGI+ L+L   + ++    CL   L
Sbjct: 102 WLLFLSRNGIKELVLELGEGEFRVPSCLFRCL 133


>ref|XP_004236987.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum
           lycopersicum]
          Length = 422

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 37/82 (45%), Positives = 50/82 (60%)
 Frame = -1

Query: 284 WATLPHLAFDDNCVTSSGDYVIDETRLNHFINQALFLHKGPIHKFKLQQSFMENCDHIDQ 105
           WA +  L F+D C+TS  D  I    L +FI + LFLH GPIHKF+L  S+      +DQ
Sbjct: 44  WAAITELVFNDTCLTSGHDKSIISCNLVNFITRCLFLHDGPIHKFELNTSYSPASPDLDQ 103

Query: 104 WLIFLSRNGIRVLILTFEDDQY 39
           WL+FLSR  I+ LI+   +D +
Sbjct: 104 WLLFLSRKDIKELIIDIGEDDW 125


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