BLASTX nr result

ID: Rheum21_contig00005928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005928
         (346 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 4...    86   5e-15
ref|XP_004303877.1| PREDICTED: chlorophyll a-b binding protein, ...    86   5e-15
ref|XP_004294267.1| PREDICTED: chlorophyll a-b binding protein 4...    86   5e-15
gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ...    86   5e-15
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...    85   9e-15
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...    85   9e-15
sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding pro...    85   9e-15
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...    85   9e-15
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1...    85   9e-15
ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1...    85   9e-15
ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 5...    85   9e-15
ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 4...    85   9e-15
ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 4...    85   9e-15
gb|EMJ13068.1| hypothetical protein PRUPE_ppa010099mg [Prunus pe...    85   9e-15
gb|EMJ13063.1| hypothetical protein PRUPE_ppa010081mg [Prunus pe...    85   9e-15
ref|XP_004233093.1| PREDICTED: chlorophyll a-b binding protein 1...    85   9e-15
gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]     85   9e-15
gb|AAA33702.1| Major Cab protein [Petunia x hybrida]                   85   9e-15
gb|AAA33700.1| Major Cab protein [Petunia x hybrida]                   85   9e-15
gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]     85   9e-15

>ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 267

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 267


>ref|XP_004303877.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 267

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 267


>ref|XP_004294267.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 267

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 267


>gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
           gi|462413410|gb|EMJ18459.1| hypothetical protein
           PRUPE_ppa010015mg [Prunus persica]
          Length = 267

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 39/39 (100%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 229 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 267


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 228 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 266


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>sp|P04781.1|CB23_PETSP RecName: Full=Chlorophyll a-b binding protein 22R, chloroplastic;
           AltName: Full=LHCII type I CAB-22R; Short=LHCP; Flags:
           Precursor gi|20479|emb|CAA26213.1| unnamed protein
           product [Petunia sp.]
          Length = 267

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 229 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 231 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 269


>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_006365561.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 50, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 229 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 267


>ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 263

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 225 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 263


>ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 263

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 225 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 263


>gb|EMJ13068.1| hypothetical protein PRUPE_ppa010099mg [Prunus persica]
          Length = 264

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 226 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 264


>gb|EMJ13063.1| hypothetical protein PRUPE_ppa010081mg [Prunus persica]
          Length = 265

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>ref|XP_004233093.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum lycopersicum]
          Length = 394

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 356 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 394



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNN 265
           FFVQAIVTGKGP+ENLADHLADPVNNN
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNN 253


>gb|AAA80594.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


>gb|AAA33702.1| Major Cab protein [Petunia x hybrida]
          Length = 125

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 87  FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 125


>gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
          Length = 76

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 38  FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 76


>gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 38/39 (97%), Positives = 39/39 (100%)
 Frame = -2

Query: 345 FFVQAIVTGKGPIENLADHLADPVNNNAWSYATNFVPGK 229
           FFVQAIVTGKGP+ENLADHLADPVNNNAWSYATNFVPGK
Sbjct: 227 FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK 265


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